Rapid microsatellite marker development for African mahogany ( Khaya senegalensis, Meliaceae) using next-generation sequencing and assessment of its intra-specific genetic diversity.

Khaya senegalensis (African mahogany or dry-zone mahogany) is a high-value hardwood timber species with great potential for forest plantations in northern Australia. The species is distributed across the sub-Saharan belt from Senegal to Sudan and Uganda. Because of heavy exploitation and constraints on natural regeneration and sustainable planting, it is now classified as a vulnerable species. Here, we describe the development of microsatellite markers for K. senegalensis using next-generation sequencing to assess its intra-specific diversity across its natural range, which is a key for successful breeding programs and effective conservation management of the species. Next-generation sequencing yielded 93943 sequences with an average read length of 234bp. The assembled sequences contained 1030 simple sequence repeats, with primers designed for 522 microsatellite loci. Twenty-one microsatellite loci were tested with 11 showing reliable amplification and polymorphism in K. senegalensis. The 11 novel microsatellites, together with one previously published, were used to assess 73 accessions belonging to the Australian K. senegalensis domestication program, sampled from across the natural range of the species. STRUCTURE analysis shows two major clusters, one comprising mainly accessions from west Africa (Senegal to Benin) and the second based in the far eastern limits of the range in Sudan and Uganda. Higher levels of genetic diversity were found in material from western Africa. This suggests that new seed collections from this region may yield more diverse genotypes than those originating from Sudan and Uganda in eastern Africa.

Multiplication of hybrid aspen (Populus tremula L. x P. tremuloides Michx.) from cuttings

The primary aim of the present study was to find an efficient and simple method of vegetative propagation for producing large numbers of hybrid aspen (Populus tremuloides L. x P. tremula Michx.) plants for forest plantations. The key objectives were to investigate the main physiological factors that affect the ability of cuttings to regenerate and to determine whether these factors could be manipulated by different growth conditions. In addition, clonal variation in traits related to propagation success was examined. According to our results, with the stem cutting method, depending on the clone, it is possible to obtain only 1−8 plants from one stock plant per year. With the root cutting method the corresponding values for two-year-old stock plants are 81−207 plants. The difference in number of cuttings between one- and two-year-old stock plants is so pronounced that it is economically feasible to grow stock plants for two years. There is no reason to use much older stock plants as a source of cuttings, as it has been observed that rooting ability diminishes as root diameter increases. Clonal variation is the most important individual factor in propagation of hybrid aspen. The fact that the efficiently sprouted clones also rooted best facilitates the selection of clones for large-scale propagation. In practice, root cuttings taken from all parts of the root system of hybrid aspen were capable of producing new shoots and roots. However, for efficient rooting it is important to use roots smaller than one centimeter in diameter. Both rooting and sprouting, as well as sprouting rate, were increased by high soil temperature; in our studies the highest temperature tested (30ºC) was the best. Light accelerated the sprouting of root cuttings, but they rooted best in dark conditions. Rooting is essential because without roots the sprouted cutting cannot survive long. For aspen the criteria for clone selection are primarily fiber qualities and growth rate, but ability to regenerate efficiently is also essential. For large-scale propagation it is very important to find clones from which many cuttings per stock plant can be obtained. In light of production costs, however, it is even more important that the regeneration ability of the produced cuttings be high.

Contrained linear spectral unmixing technique for regional land cover mapping using MODIS data

Over the last few decades, there has been a significant land cover (LC) change across the globe due to the increasing demand of the burgeoning population and urban sprawl. In order to take account of the change, there is a need for accurate and up- to-date LC maps. Mapping and monitoring of LC in India is being carried out at national level using multi-temporal IRS AWiFS data. Multispectral data such as IKONOS, Landsat- TM/ETM+, IRS-1C/D LISS-III/IV, AWiFS and SPOT-5, etc. have adequate spatial resolution (~ 1m to 56m) for LC mapping to generate 1:50,000 maps. However, for developing countries and those with large geographical extent, seasonal LC mapping is prohibitive with data from commercial sensors of limited spatial coverage. Superspectral data from the MODIS sensor are freely available, have better temporal (8 day composites) and spectral information. MODIS pixels typically contain a mixture of various LC types (due to coarse spatial resolution of 250, 500 and 1000 m), especially in more fragmented landscapes. In this context, linear spectral unmixing would be useful for mapping patchy land covers, such as those that characterise much of the Indian subcontinent. This work evaluates the existing unmixing technique for LC mapping using MODIS data, using end- members that are extracted through Pixel Purity Index (PPI), Scatter plot and N-dimensional visualisation. The abundance maps were generated for agriculture, built up, forest, plantations, waste land/others and water bodies. The assessment of the results using ground truth and a LISS-III classified map shows 86% overall accuracy, suggesting the potential for broad-scale applicability of the technique with superspectral data for natural resource planning and inventory applications.

Análisis biofísico y social de los servicios ecosistémicos de la reseva de Biosfera de Urdaibai

[es]Conocer la distribución de la biodiversidad y de los servicios de los ecosistemas (SE), así como la demanda por parte de la población es la base para realizar una gestión sostenible en la Reserva de la Biosfera de Urdaibai. En este trabajo se analizan los valores ecológicos de la biodiversidad y de cinco SE (regulación del ciclo hidrológico, almacenamiento de carbono, polinización, uso recreativo y disfrute estético del paisaje) en las seis unidades ambientales/ecosistemas presentes en la zona (encinar, marisma, plantaciones forestales, fondos y prados de valles, bosques naturales y hábitat costeros). Se compara esta evaluación con la percepción que la población tiene de dichos servicios y con la demanda que manifiestan los habitantes/usuarios de la reserva. De los resultados obtenidos se concluye que existe una gran demanda de los servicios de abastecimiento y regulación por parte de la población; sin embargo, la población percibe que Urdaibai ofrece principalmente servicios culturales. También se observa que la población no discrimina las diferentes contribuciones que los diferentes ecosistemas realizan a los servicios y que en general las valoraciones de los servicios suministrados asignadas por la población a los diferentes ecosistemas son superiores a las obtenidas con los datos biofísicos, con la excepción de los bosques los cuales son infravalorados. Castellano.

岷江上游人工针叶、阔叶林土壤可溶性有机物质特征及其对凋落物分解的响应

土壤可溶性有机物质（Dissolved organic matter，DOM）作为土壤有机质的活性组分，在陆地生态系统物质循环中扮演非常重要的角色。土壤DOM的主要成分可溶性有机碳（Dissolved organic carbon，DOC）和氮（Dissolved organic nitrogen，DON）参与C、N循环过程。为深入揭示全球C、N循环过程机制，在未开展DOC和DON的地区进行相关研究是有必要的。森林土壤（包括枯枝落叶层）DOC、DON动态及调控机理的研究是目前国际上森林生态系统C、N循环研究热点之一。本研究立足于暖温带岷江上游茂县地区人工林植被，对土壤DOC和DON的库容量，季节动态及其与其它养分之间的关系进行了系统研究，旨在了解DOC和DON在该区生态系统中的重要作用，并探讨作为DOM主要来源的叶凋落物对DOC和DON的动态影响，研究有助于更加详细地了解该区生态系统C和N循环过程。本论文主要研究结论如下： 1研究了岷江上游地区两大主要土壤类型（棕壤和褐土）不同植物群落下土壤的DOC和DON含量及特征，结果表明：DOC和DON在两种土壤类型中均有库容量存在，DOC在0-10cm和10-20cm土层的含量幅度分别111.96~159.95 mg kg-1和69.02~100.84 mg kg-1。DON在0-10cm和10-20cm土层的含量幅度分别11.88~23.08 mg kg-1和4.70~10.77 mg kg-1。游离氨基酸在0-10cm和10-20cm土层的含量幅度分别0.84~1.66 mg kg-1和0.39~0.73 mg kg-1。DOC、DON与土壤中的一些养分因子表现出了显著的相关关系，共同反映了土壤的状况和质量，在该区开展DOC和DON的系统研究是有必要的。 2 对油松与连香树林地土壤DOC、DON以及其它化学指标的季节动态进行了研究，结果表明：油松与连香树林地土壤DOC和DON的季节动态变化表现了类似的规律，DOC和DON的含量均以秋季最高。DOC和DON的季节动态变化主要受凋落物生物因素的影响，但其微生物活力的生物因素以及降雨、温度等非生物因素也是控制土壤DOC和DON含量的重要因素。土壤DON在土壤中的行为不同于矿质氮，其季节动态不同于NO3--N和NH4+-N的季节动态，在研究N循环过程中，应考虑DON的变化情况。 3 对油松与连香树林地分解层和表层土壤（0-10cm）氨基酸周转动态进行了研究，结果表明：油松林地和连香树林地均以分解层的氨基酸含量高于矿质表层土壤的含量。每个取样时期，油松林地内各层次的氨基酸含量高于连香树林地内相应层次的含量。两林地各层次无机氮含量均超过了氨基酸的含量，并且室内培养30天后无机N的含量仍然高于氨基酸的含量，所以可以认为该区立地条件下无论是在有机分解层还是矿质土层植物吸收利用的氮素仍是以无机N为主。 4 松林下松针凋落物易于累积，这与松针凋落物分解缓慢有关，从而导致松林内养分周转缓慢。通过用不同性质凋落物和灌丛地土壤构建微生态系统，比较油松、辐射松、连香树、灌丛虎榛子凋落物分解对C、N循环过程的影响，结果显示油松和辐射松针叶凋落物比连香树、虎榛子凋落物分解更慢，减缓了养分循环过程。然而将针叶凋落物与阔叶凋落物混合后，油松和辐射松针叶凋落物的分解加快，C、N元素的循环过程也加速。此结果表明在松林内维持具有高质量凋落物的灌丛植被或在松林内栽植一些阔叶树种如连香树对维持和增进松树人工林的土壤肥力有重大的作用。室内培养的结果还显示添加凋落物后土壤DOC和DON的含量显著增加，表明凋落物是土壤DOM的直接来源。然而不同物种凋落物处理下土壤DOC和DON的含量有所不同，并随时间发生改变。混合凋落物处理下土壤DOC和DON的含量均高于松针凋落物单独处理下土壤DOC和DON的含量。DON是一个主要的水溶性N库，随时间的变化趋势与无机N的变化趋势不同，在土壤N循环过程中起到了中间N库的作用。 As a labile fraction of soil organic matter, dissolved organic matter (DOM) plays a very important role in material cycling of terrestrial ecosystem. The turnover of DOM is now being considered as main components in nutrient cycling. DOM mainly includes dissolved organic carbon (DOC), -nitrogen (DON), -phosphorous (DOP) and –sulfur (DOS). Among these constituents, DOC and DON directly participate in C and N cycling. It is essential to study DOC and DON dynamics and their controlling factors in the areas where no related study has ever been carried out. Study about them can provide data supports on understanding the mechanism of the global C and N cycling. DOC and DON dynamics and their controlling factors have been focused on in the research of C and N cycling of forest ecosystems. Based on forest plantations of Maoxian, Minjiang River in warm temperate zone, soil DOC and DON pool size, their seasonal dynamics, and the correlation between DOC, DON and other nutrients were studied in order to understand the importance of DOC and DON in the study area. Soil DOC and DON dynamics induced by leaf litter decomposition were also studied. The study contributed to comprehensively understanding C and N cycling processes and providing baseline data for including DOC and DON into the indices system of evaluating nutrient conditions. The results were as follows: 1 Several different plant communities under brown soil and Cinnamon soil were chosen as sampling plots. The contents and features of soil DOC and DON were evaluated. The results showed that DOC and DON were present under the two soil types. DOC contents in the top soil (0-10 cm) and the subsoil (10-20 cm) respectively varied from 111.96 mg kg-1to 159.95 mg kg-1, and 69.02 mg kg-1 to 100.84 mg kg-1. DON contents in the top soil (0-10 cm) and the subsoil (10-20 cm) respectively varied from 11.88 mg kg-1to 23.08 mg kg-1, and 4.70 mg kg-1 to 10.77 mg kg-1. Free amino acid contents in the top soil (0-10 cm) and the subsoil (10-20 cm) respectively varied from 0.84 mg kg-1to 1.66 mg kg-1, and 0.39 mg kg-1 to 0.73 mg kg-1. Significant correlations were found between DOC, DON and some nutrient indices, which together reflected soil condition and quality. It was hence essential to study DOC and DON in the study area. 2 Seasonal dynamics of DOC, DON, inorganic N, microbial biomass C and N were studied under Pinus tabulaeformis and Cercidiphyllum japonicum plantation. The results indicated that seasonal dynamics of soil DOC and DON under the two plantations performed similar change pattern, with the highest values in autumn. The seasonal dynamics of soil DOC and DON were mainly influenced by the litterfall. However, biotic factors such as soil microbial activities and abiotic factors such as precipitation and temperature also controlled the dynamics of soil DOC and DON. The seasonal dynamic of DON was different from that of NO3--N and NH4+-N, which showed that the behavioral differences between DON and inorganic nitrogen. And hence, it was proposed to include DON into soil N cycling in the study area. 3 Amino acid dynamics in Oa and topsoil (0-10 cm) under P. tabulaeformis and C. japonicum plantation were studied. The results showed that amino acid content in Oa was significantly higher than that in mineral soil. At each sampling time, significantly higher amino acid contents were found in P. tabulaeformis plantation than in C. japonicum plantation. The content of inorganic nitrogen was much higher than the content of amino acid in each sampling layer at each sampling time. After a 30-days laboratory incubation the content of amino acid was still lower than the content of inorganic nitrogen. The results implicated that the form of N absorbed by plants in these study sites were mainly inorganic nitrogen. 4 Usually needle litter is more resistant to decomposition, which leads to needle litter accumulation in pure coniferous stands and slows down the rate of nutrient circulation. By constructing microcosms with local shrubland soil and containing the four single-species (P. tabulaeformis, P. radiata, C. japonicum, Ostryopsis davidiana) litters, the decomposition rates and related C and N dynamics of needle litters and broadleaved litters during the early stage were compared. The results showed that the decomposition rates of pine needles were lower than those of broadleaved litters, which descended C and N cycling processes. However, the presence of C. japonicum or O. davidiana litter into pine needles increased the decomposition rates of pine needles and also dramatically promoted C and N cycling processes. It should be appropriate for plantation managers to consider C. japonicum as an ameliorative species or remain O. davidiana in pine plantations to improve soil conditions and help maintain soil fertility. The laboratory incubation still showed that DOC and DON contents in all litter-amended treatments were significantly higher than no litter-amended treatment, which proved that litter could be a direct source of DOM in soils. Different species litters induced different soil DOC and DON contents, which correspondingly changed over time. DOC and DON contents in mixed litter treatments were higher than those in pine needle litter treatments. As a major soluble N pool, DON developed a different changing pattern over time compared with inorganic N and played a role of interim N pool in soil N cycling.

Vers une transition forestière en Thaïlande? : analyse causale de l’avancée des forêts à partir du cas de Phetchabun

Selon des thèses développées au cours des années 1990 et 2000, le développement économique constitue à la fois la source et la solution aux problèmes environnementaux. Au sujet des forêts, les transitions forestières (c’est-à-dire le passage de la déforestation à la reforestation) documentées dans certains pays développés seraient causées par des dynamiques universelles intrinsèques au développement et à la modernisation des sociétés. Nos travaux ont porté sur l’application de cette vision optimiste et controversée à l’évolution des superficies forestières en Thaïlande. S’appuyant sur une recension de la littérature, sur des données secondaires ainsi que nos travaux de terrain dans la région de Phetchabun, la thèse offre les apports suivants. Elle démontre que contrairement à l’idée répandue en Thaïlande, le ralentissement de la déforestation a été suivi par une expansion forestière substantielle entre environ 1995 et 2005. Ce regain forestier est lié à la disparition presque complète de l’expansion agricole, à l’établissement de plantations sylvicoles et, surtout, à l’abandon de terres agricoles. Cet abandon agricole découle d’abord et avant tout de la faible et incertaine rentabilité de l’agriculture dans certaines zones non irriguées. Ce phénomène s’explique, entre autres, par la dégradation des sols et par l’incapacité des agriculteurs à contrer l’impact des transformations économiques internes et externes à la Thaïlande. L’accroissement de la pression de conservation n’a pu contribuer à l’expansion forestière que dans certains contextes (projets de reforestation majeurs appuyés par l’armée, communautés divisées, terres déjà abandonnées). Sans en être une cause directe, l’intensification agricole et la croissance des secteurs non agricoles ont rendu moins pénibles la confiscation et l’abandon des terres et ont permis que de tels phénomènes surviennent sans entraîner d’importants troubles sociaux. Dans un contexte d’accroissement des prix agricoles, notamment celui du caoutchouc naturel, une partie du regain forestier aurait été perdu depuis 2005 en raison d’une ré-expansion des surfaces agricoles. Cela illustre le caractère non permanent de la transition forestière et la faiblesse des mesures de conservation lorsque les perspectives de profit sont grandes. La thèse montre que, pour être robuste, une théorie de la transition forestière doit être contingente et reconnaître que les variables macro-sociales fréquemment invoquées pour expliquer les transitions forestières (ex. : démocratisation, intensification agricole, croissance économique) peuvent aussi leur nuire. Une telle théorie doit également prendre en compte des éléments d’explication non strictement économiques et souvent négligés (menaces à la sécurité nationale, épuisement des terres perçues comme arables et libres, degré d’attachement aux terres et capacité d’adaptation et résilience des systèmes agricoles). Finalement, les écrits sur la transition forestière doivent reconnaître qu’elle a généralement impliqué des impacts sociaux et même environnementaux négatifs. Une lecture de la transition forestière plus nuancée et moins marquée par l’obsession de la seule reforestation est seule garante d’une saine gestion de l’environnement en respect avec les droits humains, la justice sociale et le développement durable.

Water, land use change and 'new forests': what are the challenges for South-Western Victoria?

Land use change has occurred rapidly in southwestern Victoria over the last decade and is expected to continue, albeit at a slower pace. One of these changes has been the development of 'new forests', that is industrial and farm forestry plantations and environmental plantings. Some of the challenges that these land use changes pose for water and natural resource managers are discussed. Land use change is expected to substantially reduce potential water yield in four of the region's seven drainage basins (A).

Evaluation of Trichospilus diatraeae (Hymenoptera: Eulophidae) as parasitoid of the eucalyptus defoliator Euselasia eucerus (Lepidoptera: Riodinidae).

Lepidopteran pests have occurred in eucalyptus plantations in Brazil since 1948, reaching high population levels, reducing tree growth and causing considerable losses in wood production. The control of defoliating caterpillars in eucalyptus forests is complex, mainly due to the large extent of forest plantations and tree height, necessitating the aerial application of chemical or biological insecticides. Due to this complexity, alternative control methods have been proposed, for instance biological control through the use of parasitoids. Trichospilus diatraeae Cherian & Margabandhu, 1942 is a gregarious pupal parasitoid that preferentially attacks species of the order Lepidoptera. This is the first report of T. diatraeae parasitizing pupae of the eucalyptus defoliator Euselasia eucerus Hewitson in Brazil. This parasitoid offers new perspectives for the biological control programmes of this species in eucalyptus plantations in Brazil.

Can native vegetation recover after slash pine cultivation in the Brazilian Savanna?

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Termite pests in eucalyptus forests of brazil

The termite problem in eucalyptus forest plantations in Brazil has been registered since 1908. The main termite pests can be separated in four groups: a) seedling/sapling termites; b) heartwood termites; c) bark termites and d) wood termites. The termites in the first group attack root and stalk bases of young eucalyptus plants. The most common species are Syntermes spp. and Cornitermes spp. and they are a serious obstacle to early eucalyptus developing. The heartwood termites attack formed trees destroying eucalyptus heartwood. Coptotermes testaceus is the most cited species in reports, but more species probably occur. Plant mortality caused by seedling/sapling termites vary of 10-70 %. There are not effective control methods to heartwood termites. The main seedling/sapling termite control strategy is the chemical barrier around root systems of plants. Nowadays, studies are being carried out to determine monitoring systems to termite infestations. Early results indicate that proportionally, few areas really need insecticide application, due to spatial distribution of termites to be aggregated. Therefore, it is necessary to develope techniques rationalizing insecticide utilization in eucalyptus plantations, to keep production systems feasible and to be suitable for environmental exigencies.

Doses crescentes de nitrogênio, fósforo, potássio e diferentes níveis de saturação por bases em relação ao desenvolvimento e nutrição mineral de Teca (Tectona grandis L. F.), sob condições de vaso

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Não preferência para oviposição e antibiose em genótipos de eucalipto a Glycaspis brimblecombei Moore, 1964 (Hemiptera: Psyllidae)

Pós-graduação em Agronomia (Entomologia Agrícola) - FCAV

Determinação do território de forrageamento e avaliação do uso de micro porta-iscas para as saúvas Atta sexdens rubropilosa Forel, 1908 e Atta laevigata Fr. Smith, 1858 (Hymenoptera, Formicidae)

Pós-graduação em Agronomia (Proteção de Plantas) - FCA

Dinâmica espaço-temporal e quantificação dos danos e perdas da murcha de Ceratocystis em eucalipto na produção de carvão vegetal

Pós-graduação em Ciência Florestal - FCA

Levantamento populacional de lepidópteros e coleópteros em plantações de eucalipto e em Cerrado na região central do Mato Grosso do Sul

Pós-graduação em Ciência Florestal - FCA