Production of Recombinant Trichoderma Reesei Endoglucanase Protein CEL7B by Using Kluyveromyces Lactis

This research is about producing recombinant Trichoderma reesei endoglucanase Cel7B by using Kluyveromyces lactis, transformed with chromosomally integrated Cel7B cDNA, as a host cell (K. lactis Cel7B). Cel7B is one of the glycoside hydrolyze family of proteins that are produced by T. reesei. Cel7B together with other endoglucanases, exoglucanases, and â-glucosidases hydrolyze cellulose to glucose, which can then be fermented to biofuels or other value-added products. The research objective of this MS project is to examine favorable fermentation conditions for recombinant Cel7B enzyme production and improved activity. Production of enzyme on different types of media was examined, and the activity of the enzyme was measured by using different tools or procedures. The first condition tested for was using different concentrations of galactose as a carbon and energy source; however galactose also acts as a potent promoter of recombinant Cel7B expression in K. lactis Cel7B. The purpose of this method is to determine the relationship between production of enzyme with increasing sugar concentration. The second culture condition test was using different types of media: a complex medium-yeast extract, peptone, galactose (YPGal); a minimal medium-yeast nitrogen base (YNB) with galactose; and a minimal medium with supplement-yeast nitrogen base with casamino acid (YBC), a nitrogen source, with galactose. The third condition was using different types of reactors or fermenters: a small reactor (shake flask) and a larger automated bioreactor (BioFlo 3000 fermenter). The purpose of this method is to determine the quantity of the protein produced by using different environments of production. Different tools to determine the presence and activity of Cel7B enzyme were used. For the presence of enzyme, sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) was used. Secondly, to detect enzyme activity, the carboxymethyl cellulose- 3,5-dinitrosalicylic acid (CMC- DNS) assay was employed. SDS-PAGE showed that the enzyme band was at 67 kDa, which is larger than native Cel7B (52 kDa.), likely due to over glycolylation during post-translational processing in K. lactis. For the different types of media used in our fermentation, recombinant Cel7B was produced from yeast extract peptone galactose (YPGal), and yeast nitrogen base with casamino acid (YBC), but was not produced and no activity was detected from yeast nitrogen base (YNB). This experiment concluded that the Cel7B production requires the amino acid resources as part of fermentation medium. In experiments where recombinant Cel7B net activity was measured at 1% galactose initial concentration in YPGal and YBC media, higher enzyme activity was detected for the complex medium YPGal. Higher activity of recombinant Cel7B was detected for flask culture in 2% galactose compared to 1% galactose for YBC medium. Two bioreactor experiments were conducted under these culture conditions at 30°C, pH 7.0, dissolved oxygen of 50% of saturation, and 250 rpm agitation (variable depending on DO control) K. lactis-Cel7B yeast growth curves were quite reproducible with maximum optical density (O.D) at 600 nm of between 7 and 8 (when factoring dilution of 10:1). Galactose was consumed rapidly during the first 15 hours of bioreactor culture and recombinant Cel7B started to appear in the culture at 10-15 hours and increased thereafter up to a maximum of between 0.9 and 1.6 mg/mL/hr in these experiments. These bioreactor enzyme activity results are much higher than comparable experiments conducted with flask-scale culture (0.5 mg/mL/hr). In order to achieve the highest recombinant Cel7B activity from batch culture of K. lactis-Cel7B, based on this research it is best to use a complex medium, 2% initial galactose concentration, and an automated bioreactor where good control of temperature, pH, and dissolved oxygen can be achieved.

Biochemical properties of a beta-mannanase and a beta-xylanase produced by Ceriporiopsis subvermispora during biopulping conditions

One mannanase and one of the three xylanases produced by Ceriporiopsis subvermispora grown on Pinus taeda wood chips were characterized. A combination of ion exchange chromatography and SDS-PAGE data revealed the existence of a high-molecular-weight mannanase of 150 kDa that was active against galactoglucomannan and xylan, Its activity was optimal at pH 4.5. The K(m) value with galactoglucomannan as substrate was 0.50 mg ml (1). One xylanase with molecular mass of 79 kDa was also purified and characterized. Its activity was optimal at 60 degrees C and pH 8.0. Its K(m) value with birchwood xylan as substrate was 1.65 mg ml (1). Both the mannanase and the 79 kDa xylanase displayed relatively high activity on carboxymethyl cellulose. The sensitivity of the xylanase and mannanase to various salts was evaluated. None of the tested salts inhibited the xylanase, but Mn(+2), Fe(+3), and Cu(+2) were strong inhibitors for the mannanase. (C) 2008 Elsevier Ltd. All rights reserved.

Linjasekoittimensekoituskyvyn määrittäminen

Työn tavoitteena oli kehittää sekoituskyvyn empiirinen monimuuttujafunktio eräälle dynaamiselle linjasekoittimelle. Monimuuttujafunktio oli tarkoitus kehittää sekoittimen kierrosnopeuden, virtaavien materiaalien ja tilavuusvirtausten perus-teella. Työn kirjallisuusosassa tarkasteltiin pääosin dynaamisia linjasekoittimia ja niiden toimintaperiaatteita sekä sekoituskyvyn määrittämiseen soveltuvia mittausmene-telmiä. Sekoitettavien aineiden epähomogeenisuus määritettiin mittaamalla termoelemen-teillä sekoittimen jälkeisen virran lämpötilavaihtelut. Sekoitettavina aineina käy-tettiin kolmea erilaista seosta: vesi-vesi-, kuitususpensio-vesi- ja karboksyylime-tyyliselluloosa-vesiseoksia. Muita muuttujia kokeissa olivat neljä eri sekoittimen kierrosnopeutta, neljä eri päävirran tilavuusvirtausta ja kolme päävirran sekäsii-hen lisättävän sivuvirran suhdetta. Monimuuttujafunktiokehitettiin vain kuitususpensio-vesiajojen pohjalta muilla seoksilla tehtyjen koeajojen osittaisen epäonnistumisen vuoksi. Hallitsevaksi pa-rametriksi monimuuttujafunktiossa osoittautui sekoittimen kierrosnopeus. Osittai-nen epäonnistuminen kokeissa johtui osaksi termoelementtien käytön sopimatto-muudesta sekoituskyvyn määrittämiseen ja osaksi sekoitettavien aineiden valin-nasta. Jatkotutkimuksiaajatellen muista sekoituskyvyn mittaamiseen käytettävissä olevista menetelmistäkäyttökelpoisimmaksi arvioitiin sähkötomografia.

Kalvosuodatusprosessin tehostaminen paperiteollisuuden sovelluksissa

Tässä diplomityössä tutkittiin kalvosuodatuksen esikäsittelymenetelmiä ja kalvonpesua. Työn kirjallisuusosassa käsitellään vuon alenemiseen vaikuttavia tekijöitä, esikäsittelymenetelmiä ja kalvonpesua. Kokeellisessa osassa tutkittiin kemiallisten esikäsittelyjen vaikutusta vuon alenemiseen paperitehtaan happaman kiertoveden kirkkaan suodoksen kalvosuodatuksessa. Esikäsittelykemikaalit olivat ympäristöystävällisiä ja paperinvalmistusprosessiin soveltuvia. Lisäksi tutkittiin kalvonpesuaineiden pesutehokkuuksia. Tutkitut esikäsittelyaineet olivat mikrokiteinen kitosaani, karboksimetyyliselluloosa, selluloosa- ja puukuitu sekä kaupallinen antiskalantti. Pesuaineista tutkittiin kolmea kaupallista kalvonpesuainetta, yhtä kalvopesun tehostusainetta sekä peretikkahappoa. Kokeet tehtiin kahdella laboratoriomittakaavaisella kalvosuodattimella. Kalvoina käytettiin kahta nanosuodatus- ja yhtä ultrasuodatuskalvoa. Vuon alenemista tutkittiin suodatuksen aikaisena alenemisena ja vesivuohon verrattavana alenemisena. Esikäsittelyjen vaikutusta erotustehokkuuteen tutkittiin ioni-, johtokyky-, orgaanisen hiilen kokonaispitoisuus-, sokeri-, sameus- ja ligniinireduktioilla. Lisäksi määritettiin kalvon likaantuminen suodatuksen aikana vesivuon määrityksillä ennen ja jälkeen suodatuksen. Pesutehokkuus määritettiin vesivuon määrityksillä suodatuksen jälkeen ja pesun jälkeen. Kitosaani- ja karboksimetyyliselluloosakäsittelyillä oli vuon alenemista estävä vaikutus hydrofiilisellä nanosuodatuskalvolla suodatettaessa. Kitosaanikäsittelyn 5 g/dm3:n ja karboksimetyyliselluloosakäsittelyn 2 g/ dm3:n annostuksella vuot alentuivat suodatuksen aikana 8 %-yksikköä vähemmän kuin ilman esikäsittelyä. Puukuitukäsittely stabiloi 0,1 g/dm3:n annostuksella saman kalvon vuota, kun kiintoainetta ei poistettu syötöstä. Hydrofobisen nanosuodatuskalvon vuon alenemista ehkäisivät puu- ja selluloosakuitukäsittelyt sekä karboksimetyyliselluloosakäsittely. Karboksimetyyliselluloosakäsittely vähensi vuon alenemista 25 %-yksikköä ja puukuitukäsittely 13 %-yksikköä. Hydrofiilisellä ultrasuodatuskalvolla vuon aleneminen oli pientä ilman esikäsittelyä. Reduktioihin esikäsittelyt vaikuttivat parhaiten ultrasuodatuskalvolla. Kitosaanikäsittely nosti 1 g/dm3:n annostuksella alumiinireduktion 50 %:sta 96 %:iin ja 5 g/dm3:n annostuksella rautareduktion 30 %:sta 55 %:iin. Karboksyylimetyyliselluloosakäsittelyt vaikuttivat parantavasti mangaanin, magnesiumin, raudan ja kalsiumin reduktioihin. Optimi karboksyylimetyyliselluloosa-annostus oli 2 g/dm3. Merkittävin reduktion nousu oli kalsiumilla, jonka reduktio nousi esikäsittelyllä 4 %:sta 57 %:iin. Reduktiota nostava mekanismi oli kalvon pinnalle muodostuva sekundaarikerros. Pesuaineista tehokkain oli entsyymiä sisältävä kalvonpesuaine. Suurin vaikutus sillä oli hydrofobisen nanosuodatuskalvon pesussa. Optimiannostuksella (0,5 %) kalvon vesivuo pesun jälkeen oli 114 % pesua edeltäneestä vesivuosta. Muut kaupalliset pesuaneet oli tehokkaita hydrofiilisille kalvoille. Peretikkahappo oli yksittäisenä pesuaineena heikkotehoinen.

Preparação, caracterização e propriedades de filmes poliméricos com potencial aplicação no recobrimento de sementes

Films of sodium carboxymethyl cellulose, sodium alginate and their mixture were evaluated in terms of interactions between the polymers, morphology, water absorption and application as seed coatings. FTIR analysis suggested that only hydrophobic interactions occurred between the polymers. The coating of bean seeds was confirmed by microscopy, indicating the formation of dense and homogeneous films with 7 μm thickness. The obtained films did not affect the germination capacity of the seeds. In summary, the characteristics and properties of the films formed and the water absorption capacity, indicate that these systems are viable for use in seed coating processes.

Slurry flows in progressive cavity and in hose pumps

The aim of this thesis was to research how slurry’s viscosity and rheology affect to pumping in peristaltic hose pump and in eccentric progressive cavity pump. In addition, it was researched the formed pressure pulsation in hose pump. Pressure pulsation was studied by pumping different slurries and by using different pipe materials. Pressure and power curves were determined for both used pumps. It was also determined NPSHR curve for the progressive cavity pump. Literature part of the thesis considered to distribute fluids to different rheology types, as well as theories and models to identify different rheology types. Special attention was paid to non-Newtonian fluids, which were also used in experimental part of this thesis. In addition, the literature part discusses about pumps, parameters for pump sizing, and pressure pulsation in hose pump. Starch, bentonite, and carboxymethyl cellulose slurries were used in the experimental part of this thesis. The slurries were pumped with Flowrox peristaltic hose pump (LPP-T32) and eccentric progressive cavity pump (C10/10). From the each slurry was taken a sample, and the samples were analyzed for concentration, viscosity and rheology type. The used pipe materials in pressure pulsation experiments were steel and elastic, and it was also used a prototype of pulsation dampener. The pulsation experiments indicated that the elastic pipe and the prototype of pulsation dampener attenuated pressure pulsation better than the steel pipe at low pressure levels. The differences between different materials disappeared when pressure level and pump rotation speed increased. In slurry experiments, pulsation was different depending on rheology and viscosity of the slurry. According to experiments, the rheology did not significantly affect to pump power consumption or efficiency.

CPU0213, a novel endothelin type A and type B receptor antagonist, protects against myocardial ischemia/reperfusion injury in rats

The efficacy of endothelin receptor antagonists in protecting against myocardial ischemia/reperfusion (I/R) injury is controversial, and the mechanisms remain unclear. The aim of this study was to investigate the effects of CPU0123, a novel endothelin type A and type B receptor antagonist, on myocardial I/R injury and to explore the mechanisms involved. Male Sprague-Dawley rats weighing 200-250 g were randomized to three groups (6-7 per group): group 1, Sham; group 2, I/R + vehicle. Rats were subjected to in vivo myocardial I/R injury by ligation of the left anterior descending coronary artery and 0.5% sodium carboxymethyl cellulose (1 mL/kg) was injected intraperitoneally immediately prior to coronary occlusion. Group 3, I/R + CPU0213. Rats were subjected to identical surgical procedures and CPU0213 (30 mg/kg) was injected intraperitoneally immediately prior to coronary occlusion. Infarct size, cardiac function and biochemical changes were measured. CPU0213 pretreatment reduced infarct size as a percentage of the ischemic area by 44.5% (I/R + vehicle: 61.3 ± 3.2 vs I/R + CPU0213: 34.0 ± 5.5%, P < 0.05) and improved ejection fraction by 17.2% (I/R + vehicle: 58.4 ± 2.8 vs I/R + CPU0213: 68.5 ± 2.2%, P < 0.05) compared to vehicle-treated animals. This protection was associated with inhibition of myocardial inflammation and oxidative stress. Moreover, reduction in Akt (protein kinase B) and endothelial nitric oxide synthase (eNOS) phosphorylation induced by myocardial I/R injury was limited by CPU0213 (P < 0.05). These data suggest that CPU0123, a non-selective antagonist, has protective effects against myocardial I/R injury in rats, which may be related to the Akt/eNOS pathway.

Rheological characterization of polysaccharide gels

In this Master’s Thesis work the rheological properties of different polysaccharide gels have been studied. The results of this study are used as a starting point for further investigations of potential applications. In order to understand rheological behavior of studied materials, the commercial hydrocolloids such as sodium carboxymethyl cellulose, xanthan gum and guar gum were used as reference and comparison material for rheological studies. As a part the rheological research the development and implementation of proper measurement methods for studied materials were carried out. In the literature review, short introductions of studied materials and application areas of rheological modifiers are summarized. In addition, basic rheological concepts and key fundamentals are explained. In the experimental part the focus was on the rheological characterization of aqueous suspensions of studied materials. Especially, gel strength and solution stability were investigated. The rheological measurements included both rotational and oscillatory measurements in different conditions, where several chemical and physical properties were measured with Anton Paar MCR302 dynamic rotational rheometer. Studied polysaccharide gels can be clearly defined to be shear thinning and thixotropic materials. They have strong gel forming properties even at low concentrations, which explains the superior thickening behavior for some of the samples. Along with rheological characterization of selected materials the factors behind different phenomena were investigated. To reveal value and potential use of polysaccharide gels the influence of various factors such as concentration, temperature and ionic strength were determined. The measurements showed a clear difference between studied materials under investigated external parameters.

Effect of addition of different hydrocolloids on pasting, thermal, and rheological properties of cassava starch

Starches and gums are hydrocolloids frequently used in food systems to provide proper texture, moisture, and water mobility. Starch-gum interaction in food systems can change the starch granule swelling and its gelatinization and rheological properties. In this study, the effect of the addition of xanthan gum (XG), sodium carboxymethyl cellulose (SCMC), and carrageenan (CAR) at the concentrations of the 0.15, 0.25, 0.35 and 0.45% (w/v) on the pasting, thermal, and rheological properties of cassava starch was studied. The swelling power (SP) and the scanning electron microscopy (SEM) of the starch gels were also evaluated. The results obtained showed that xanthan gum (XG) had a strong interaction with the cassava starch penetrating between starch granules causing increase in pasting viscosities, SP, storage and loss (G', and G", respectively) modulus and reduction in the setback of the starch; sodium carboxymethyl cellulose (SCMC) greatly increased the pasting viscosities, the SP, and the storage and loss (G', and G", respectively) modulus of the starch-mixtures, mainly due to its greater capacity to hold water and not due to the interaction with cassava starch. Carrageenan (CAR) did not change any of the starch properties since there was no interaction between this gum and cassava starch at the concentrations used.

The effect of cationic-anionic polyelectrolyte multilayer surface treatment on inkjet ink spreading and print quality

The focus of the work reported in this thesis was to study and to clarify the effect of polyelectrolyte multilayer surface treatment on inkjet ink spreading, absorption and print quality. Surface sizing with a size press, film press with a pilot scale coater, and spray coating, have been used to surface treat uncoated wood-free, experimental wood-free and pigmentcoated substrates. The role of the deposited cationic (polydiallydimethylammonium chloride, PDADMAC) and anionic (sodium carboxymethyl cellulose, NaCMC) polyelectrolyte layers with and without nanosilica, on liquid absorption and spreading was studied in terms of their interaction with water-based pigmented and dye-based inkjet inks. Contact angle measurements were made in attempt to explain the ink spreading and wetting behavior on the substrate. First, it was noticed that multilayer surface treatment decreased the contact angle of water, giving a hydrophilic character to the surface. The results showed that the number of cationic-anionic polyelectrolyte layers or the order of deposition of the polyelectrolytes had a significant effect on the print quality. This was seen for example as a higher print density on layers with a cationic polyelectrolyte in the outermost layer. The number of layers had an influence on the print quality; the print density increased with increasing number of layers, although the increase was strongly dependent on ink formulation and chemistry. The use of nanosilica clearly affected the rate of absorption of polar liquids, which also was seen as a higher density of the black dye-based print. Slightly unexpected, the use of nanosilica increased the tendency for lateral spreading of both the pigmented and dye-based inks. It was shown that the wetting behavior and wicking of the inks on the polyelectrolyte coatings was strongly affected by the hydrophobicity of the substrate, as well as by the composition or structure of the polyelectrolyte layers. Coating only with a cationic polyelectrolyte was not sufficient to improve dye fixation, but it was demonstrated that a cationic-anionic-complex structure led to good water fastness. A threelayered structure gave the same water fastness values as a five-layered structure. Interestingly, the water fastness values were strongly dependent not only on the formed cation-anion polyelectrolyte complexes but also on the tendency of the coating to dissolve during immersion in water. Results showed that by optimizing the chemistry of the layers, the ink-substrate interaction can be optimized.

Condicionadores químicos do solo e seus efeitos sobre os Índices físicos

Dois condicionadores químicos, a carboximetilcelulose, nas dosagens de 0,1% e 0,25% em relação ao peso do solo seco, e o silicato de sódio, de relação sílica-álcali igual a 3,2, a 0,6% e 1,2% em peso, foram pesquisados quanto aos seus efeitos sobre os índices físicos dos solos argiloso e barro arenoso empregados neste trabalho. Os dados obtidos foram estatisticamente analisados e os resultados permitiram que se chegassem a algumas conclusões. O tratamento 0,25% de carboximetilcelulose diminuiu o peso específico aparente seco e aumentou, consequentemente, o índice de vazios e porosidade dos solos estudados. O efeito dos tratamentos 1,2% de silicato de sódio e 0,1% de carboximetilcelulose sobre o peso específico aparente seco dos solos argilosos e barro arenoso, respectivamente, foi semelhante ao do tratamento 0,25% de carboximetilcelulose.

Rheological Characterization of Hydrophylic Gels

Rheological characteristics of gels were studied, with the focus on their use as a cosmetic base. Some ideal characteristics can be predicted by the rheological characterization, such as the performance, with easy application and without dripping or forming lumps and bubbles. Moreover, it is possible to detect signs of physical instability. The gels were prepared with sodium carboxymethyl cellulose 3% and 5%, with Carbopol 940 (INCI: Carbomer) and with Carbopol Ultrez (INCI: Acrylates/C10-30 alkyl acrylate crosspolymer). The tests performed were yield stress, stress sweep and creep and recovery. The gel with 3% of sodium carboxymethyl cellulose presented the most appropriated behavior and can be indicated as the most suitable cosmetic base.

Reimplante dentário tardio após o uso do alendronato de sódio como curativo endodôntico: estudo histológico e morfométrico em dentes de ratos

Pós-graduação em Odontologia - FOA

Utilização de carboidratos digestíveis em dietas para pacu, Piaractus mesopotamicus (Holmberg, 1887)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Perfil metagenômico de solo sob cultivo de cana-de-açúcar com perspectiva na produção de bioenergia

Pós-graduação em Microbiologia Agropecuária - FCAV