1000 resultados para C-myb


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Introduction Epithelial-to-mesenchymal transition (EMT) promotes cell migration and is important in metastasis. Cellular proliferation is often downregulated during EMT, and the reverse transition (MET) in metastases appears to be required for restoration of proliferation in secondary tumors. We studied the interplay between EMT and proliferation control by MYB in breast cancer cells. Methods MYB, ZEB1, and CDH1 expression levels were manipulated by lentiviral small-hairpin RNA (shRNA)-mediated knockdown/overexpression, and verified with Western blotting, immunocytochemistry, and qRT-PCR. Proliferation was assessed with bromodeoxyuridine pulse labeling and flow cytometry, and sulforhodamine B assays. EMT was induced with epidermal growth factor for 9 days or by exposure to hypoxia (1% oxygen) for up to 5 days, and assessed with qRT-PCR, cell morphology, and colony morphology. Protein expression in human breast cancers was assessed with immunohistochemistry. ZEB1-MYB promoter binding and repression were determined with Chromatin Immunoprecipitation Assay and a luciferase reporter assay, respectively. Student paired t tests, Mann–Whitney, and repeated measures two-way ANOVA tests determined statistical significance (P < 0.05). Results Parental PMC42-ET cells displayed higher expression of ZEB1 and lower expression of MYB than did the PMC42-LA epithelial variant. Knockdown of ZEB1 in PMC42-ET and MDA-MB-231 cells caused increased expression of MYB and a transition to a more epithelial phenotype, which in PMC42-ET cells was coupled with increased proliferation. Indeed, we observed an inverse relation between MYB and ZEB1 expression in two in vitro EMT cell models, in matched human breast tumors and lymph node metastases, and in human breast cancer cell lines. Knockdown of MYB in PMC42-LA cells (MYBsh-LA) led to morphologic changes and protein expression consistent with an EMT. ZEB1 expression was raised in MYBsh-LA cells and significantly repressed in MYB-overexpressing MDA-MB-231 cells, which also showed reduced random migration and a shift from mesenchymal to epithelial colony morphology in two dimensional monolayer cultures. Finally, we detected binding of ZEB1 to MYB promoter in PMC42-ET cells, and ZEB1 overexpression repressed MYB promoter activity. Conclusions This work identifies ZEB1 as a transcriptional repressor of MYB and suggests a reciprocal MYB-ZEB1 repressive relation, providing a mechanism through which proliferation and the epithelial phenotype may be coordinately modulated in breast cancer cells.

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Background Flavonoids such as anthocyanins, flavonols and proanthocyanidins, play a central role in fruit colour, flavour and health attributes. In peach and nectarine (Prunus persica) these compounds vary during fruit growth and ripening. Flavonoids are produced by a well studied pathway which is transcriptionally regulated by members of the MYB and bHLH transcription factor families. We have isolated nectarine flavonoid regulating genes and examined their expression patterns, which suggests a critical role in the regulation of flavonoid biosynthesis. Results In nectarine, expression of the genes encoding enzymes of the flavonoid pathway correlated with the concentration of proanthocyanidins, which strongly increases at mid-development. In contrast, the only gene which showed a similar pattern to anthocyanin concentration was UDP-glucose-flavonoid-3-O-glucosyltransferase (UFGT), which was high at the beginning and end of fruit growth, remaining low during the other developmental stages. Expression of flavonol synthase (FLS1) correlated with flavonol levels, both temporally and in a tissue specific manner. The pattern of UFGT gene expression may be explained by the involvement of different transcription factors, which up-regulate flavonoid biosynthesis (MYB10, MYB123, and bHLH3), or repress (MYB111 and MYB16) the transcription of the biosynthetic genes. The expression of a potential proanthocyanidin-regulating transcription factor, MYBPA1, corresponded with proanthocyanidin levels. Functional assays of these transcription factors were used to test the specificity for flavonoid regulation. Conclusions MYB10 positively regulates the promoters of UFGT and dihydroflavonol 4-reductase (DFR) but not leucoanthocyanidin reductase (LAR). In contrast, MYBPA1 trans-activates the promoters of DFR and LAR, but not UFGT. This suggests exclusive roles of anthocyanin regulation by MYB10 and proanthocyanidin regulation by MYBPA1. Further, these transcription factors appeared to be responsive to both developmental and environmental stimuli.

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Background Red colour in kiwifruit results from the presence of anthocyanin pigments. Their expression, however, is complex, and varies among genotypes, species, tissues and environments. An understanding of the biosynthesis, physiology and genetics of the anthocyanins involved, and the control of their expression in different tissues, is required. A complex, the MBW complex, consisting of R2R3-MYB and bHLH transcription factors together with a WD-repeat protein, activates anthocyanin 3-O-galactosyltransferase (F3GT1) to produce anthocyanins. We examined the expression and genetic control of anthocyanins in flowers of Actinidia hybrid families segregating for red and white petal colour. Results Four inter-related backcross families between Actinidia chinensis Planch. var. chinensis and Actinidia eriantha Benth. were identified that segregated 1:1 for red or white petal colour. Flower pigments consisted of five known anthocyanins (two delphinidin-based and three cyanidin-based) and three unknowns. Intensity and hue differed in red petals from pale pink to deep magenta, and while intensity of colour increased with total concentration of anthocyanin, no association was found between any particular anthocyanin data and hue. Real time qPCR demonstrated that an R2R3 MYB, MYB110a, was expressed at significant levels in red-petalled progeny, but not in individuals with white petals. A microsatellite marker was developed that identified alleles that segregated with red petal colour, but not with ovary, stamen filament, or fruit flesh colour in these families. The marker mapped to chromosome 10 in Actinidia. The white petal phenotype was complemented by syringing Agrobacterium tumefaciens carrying Actinidia 35S::MYB110a into the petal tissue. Red pigments developed in white petals both with, and without, co-transformation with Actinidia bHLH partners. MYB110a was shown to directly activate Actinidia F3GT1 in transient assays. Conclusions The transcription factor, MYB110a, regulates anthocyanin production in petals in this hybrid population, but not in other flower tissues or mature fruit. The identification of delphinidin-based anthocyanins in these flowers provides candidates for colour enhancement in novel fruits.

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Anthocyanin accumulation is coordinated in plants by a number of conserved transcription factors. In apple (Malus × domestica), an R2R3 MYB transcription factor has been shown to control fruit flesh and foliage anthocyanin pigmentation (MYB10) and fruit skin color (MYB1). However, the pattern of expression and allelic variation at these loci does not explain all anthocyanin-related apple phenotypes. One such example is an open-pollinated seedling of cv Sangrado that has green foliage and develops red flesh in the fruit cortex late in maturity. We used methods that combine plant breeding, molecular biology, and genomics to identify duplicated MYB transcription factors that could control this phenotype. We then demonstrated that the red-flesh cortex phenotype is associated with enhanced expression of MYB110a, a paralog of MYB10. Functional characterization of MYB110a showed that it was able to up-regulate anthocyanin biosynthesis in tobacco (Nicotiana tabacum). The chromosomal location of MYB110a is consistent with a whole-genome duplication event that occurred during the evolution of apple within the Maloideae family. Both MYB10 and MYB110a have conserved function in some cultivars, but they differ in their expression pattern and response to fruit maturity.

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Background The control of plant anthocyanin accumulation is via transcriptional regulation of the genes encoding the biosynthetic enzymes. A key activator appears to be an R2R3 MYB transcription factor. In apple fruit, skin anthocyanin levels are controlled by a gene called MYBA or MYB1, while the gene determining fruit flesh and foliage anthocyanin has been termed MYB10. In order to further understand tissue-specific anthocyanin regulation we have isolated orthologous MYB genes from all the commercially important rosaceous species. Results We use gene specific primers to show that the three MYB activators of apple anthocyanin (MYB10/MYB1/MYBA) are likely alleles of each other. MYB transcription factors, with high sequence identity to the apple gene were isolated from across the rosaceous family (e.g. apples, pears, plums, cherries, peaches, raspberries, rose, strawberry). Key identifying amino acid residues were found in both the DNA-binding and C-terminal domains of these MYBs. The expression of these MYB10 genes correlates with fruit and flower anthocyanin levels. Their function was tested in tobacco and strawberry. In tobacco, these MYBs were shown to induce the anthocyanin pathway when co-expressed with bHLHs, while over-expression of strawberry and apple genes in the crop of origin elevates anthocyanins. Conclusions This family-wide study of rosaceous R2R3 MYBs provides insight into the evolution of this plant trait. It has implications for the development of new coloured fruit and flowers, as well as aiding the understanding of temporal-spatial colour change.

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Anthocyanin concentration is an important determinant of the colour of many fruits. In apple (Malus x domestica), centuries of breeding have produced numerous varieties in which levels of anthocyanin pigment vary widely and change in response to environmental and developmental stimuli. The apple fruit cortex is usually colourless, although germplasm does exist where the cortex is highly pigmented due to the accumulation of either anthocyanins or carotenoids. From studies in a diverse array of plant species, it is apparent that anthocyanin biosynthesis is controlled at the level of transcription. Here we report the transcript levels of the anthocyanin biosynthetic genes in a red-fleshed apple compared with a white-fleshed cultivar. We also describe an apple MYB transcription factor, MdMYB10, that is similar in sequence to known anthocyanin regulators in other species. We further show that this transcription factor can induce anthocyanin accumulation in both heterologous and homologous systems, generating pigmented patches in transient assays in tobacco leaves and highly pigmented apple plants following stable transformation with constitutively expressed MdMYB10. Efficient induction of anthocyanin biosynthesis in transient assays by MdMYB10 was dependent on the co-expression of two distinct bHLH proteins from apple, MdbHLH3 and MdbHLH33. The strong correlation between the expression of MdMYB10 and apple anthocyanin levels during fruit development suggests that this transcription factor is responsible for controlling anthocyanin biosynthesis in apple fruit; in the red-fleshed cultivar and in the skin of other varieties, there is an induction of MdMYB10 expression concurrent with colour formation during development. Characterization of MdMYB10 has implications for the development of new varieties through classical breeding or a biotechnological approach.

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Anthocyanin concentration is a primary determinant of plant colour. Fruit anthocyanin biosynthesis is controlled by a distinct clade of R2R3 MYB transcription factors. In apple, three recent papers describe the discovery of MYB genes activating skin, flesh and foliage anthocyanic colour. These findings lead the way to new approaches in the breeding and biotechnological development of fruit with new colour patterns.

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Physical clustering of genes has been shown in plants; however, little is known about gene clusters that have different functions, particularly those expressed in the tomato fruit. A class I 17.6 small heat shock protein (Sl17.6 shsp) gene was cloned and used as a probe to screen a tomato (Solanum lycopersicum) genomic library. An 8.3-kb genomic fragment was isolated and its DNA sequence determined. Analysis of the genomic fragment identified intronless open reading frames of three class I shsp genes (Sl17.6, Sl20.0, and Sl20.1), the Sl17.6 gene flanked by Sl20.1 and Sl20.0, with complete 5' and 3' UTRs. Upstream of the Sl20.0 shsp, and within the shsp gene cluster, resides a box C/D snoRNA cluster made of SlsnoR12.1 and SlU24a. Characteristic C and D, and C' and D', boxes are conserved in SlsnoR12.1 and SlU24a while the upstream flanking region of SlsnoR12.1 carries TATA box 1, homol-E and homol-D box-like cis sequences, TM6 promoter, and an uncharacterized tomato EST. Molecular phylogenetic analysis revealed that this particular arrangement of shsps is conserved in tomato genome but is distinct from other species. The intronless genomic sequence is decorated with cis elements previously shown to be responsive to cues from plant hormones, dehydration, cold, heat, and MYC/MYB and WRKY71 transcription factors. Chromosomal mapping localized the tomato genomic sequence on the short arm of chromosome 6 in the introgression line (IL) 6-3. Quantitative polymerase chain reaction analysis of gene cluster members revealed differential expression during ripening of tomato fruit, and relatively different abundances in other plant parts.

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水母雪莲(Saussurea medusa Maxim)为名贵珍稀中药材,其主要药用成分为类黄酮,尤其是3-脱氧类黄酮。目前关于雪莲的研究主要集中在采用细胞培养生产类黄酮等方面,但对于雪莲类黄酮生物合成的分子机制了解甚少,极大限制了这一珍贵资源的利用。本研究采用水母雪莲红色系愈伤组织及悬浮细胞为材料,构建cDNA文库,从中克隆水母雪莲类黄酮次生代谢中的相关基因并对这些基因进行了深入的生物信息学分析、转基因研究初步确定其功能,以期了解雪莲类黄酮次生代谢的分子机制,为提高类黄酮的合成奠定基础。主要结果如下: 1. 成功地构建了水母雪莲红色系愈伤组织与悬浮细胞cDNA文库,原始文库滴度达到4×106pfu/ml,扩增文库滴度接近1011 pfu/ml,重组率达98%。PCR检测插入片段,均在0.5kb到3kb之间,1kb以上占62%。从文库中检测到了chs、dfr及Myb转录因子SmP,文库覆盖度达到要求且为PCR筛选文库提供了可能。 2. 采用部分简并引物,通过RT-PCR克隆了水母雪莲查尔酮异构酶基因Smchi特异探针,并根据这一探针序列设计特异引物,采用TD-PCR法筛选cDNA文库,获得Smchi cDNA序列,全长831bp,编码一个232氨基酸残基的蛋白。根据cDNA序列克隆了Smchi DNA序列,结果表明Smchi基因无内含子。Smchi cDNA序列与翠菊chi基因高度同源,ORF区域同源性高达84%,但推测氨基酸序列则只有79.3%。Smchi mRNA具有复杂的二级结构。SmCHI具有典型的Chalcone结构域,其二级结构与苜蓿CHI蛋白十分相似,7个α-螺旋与8个延伸链由随机结构联系起来。但其活性中心的第三个关键氨基酸残基N115为M115所取代,这一取代可能导致该蛋白无生物活性,也可能使它具有一般CHI不同的功能。构建Smchi正义、反义真核表达载体,通过农杆菌介导导入烟草,获得转正义、反义Smchi基因的烟草。转基因烟草花色未改变,但叶片总黄酮发生了显著的变化,50%转正义基因烟草总黄酮含量显著提高,最高比对照提高6倍,70%转反义基因烟草总黄酮含量显著下降,最多达85.1%,初步证明Smchi具有功能,并能有效调控烟草类黄酮次生代谢。因此,SmCHI可能是不同于已知CHI的一类新的CHI蛋白,它催化的反应可能与花色素合成无关,其反应机制也可能有所不同。 3. 伴随Smchi的克隆获得了一个黄烷酮3-羟化酶类似基因Smf3h的cDNA,全长1334bp,编码一个343aa的蛋白。根据这一cDNA序列克隆了Smf3h DNA序列,全长1630bp,结果表明该基因由4个外显子和3个内含子组成。Smf3h mRNA具有十分复杂的二级结构。 推测蛋白氨基酸同源性分析表明,SmF3H属于2OG-FeII_Oxy家族,与同一家族的的颠茄H6H的同源性为45%,与拟南芥F3H的同源性为40%,但对SmF3H、典型F3H及典型H6H推测蛋白二级结构、活性中心关键氨基酸残基的位置与相对距离、软件进行功能预测分析,发现SmF3H与F3H更相似。构建Smf3h的正义与反义真核表达载体,通过农杆菌介导导入烟草,但只获得一批转正义基因的烟草,反义基因导致烟草不能再生而未获得转反义基因烟草。转基因烟草花色未改变,叶片总黄酮也与对照相似,初步确认Smf3h与烟草类黄酮生物合成无关,而是一个既不属于f3h也不属于h6h的功能未确定的新基因。 4. 采用与克隆Smchi基因相似的方法,从cDNA文库中克隆了SmP基因cDNA,全长969bp,编码一个256 aa的蛋白质。根据cDNA序列克隆了SmP基因的DNA序列,结果表明,SmP基因无内含子。SmP基因cDNA 一级结构及mRNA二级结构预测分析表明,该基因A+T含量很高(63%),所形成二级结构以A-T配对为主,其稳定性可能较差。SmP推测蛋白序列具有R2R3-Myb转录因子的典型特征,在N-端具有两个Myb DNA-binding Domain,其二级结构与鸡Myb转录因子1A5J十分相似,与其他基因如水稻OsMYB、番茄ThMYB的同源区域主要集中在这一结构域,分别为71.3%和70.8%;C-端富含丝氨酸,与烟草NtMYB、葡萄VlMYB等类黄酮调控因子相似,都呈寡聚体分布,并具有相同的保守磷酸化位点S170与S206。构建SmP基因真核表达载体,通过农杆菌介导导入烟草,获得大量转基因烟草。转基因烟草花色未发生改变,但51%的转基因烟草叶片总黄酮含量都显著提高(0.5-6倍),表明SmP具有促进烟草类黄酮生物合成的功能,但所调控的支路与花色素合成无关。初步试验结果表明,转SmP基因烟草对蚜虫具有很高的抗性,可有效地抑制蚜虫在烟草上的生长,抑制率最高可达92%-100%。这一抗性与烟草中类黄酮的积累可能具有直接的联系,但还需要进一步的试验证明。 5. 与美国俄亥俄州立大学Erich Grotewold 博士实验室合作,完成了微型EST库50个克隆的测序并进行了分析,从中获得了水母雪莲花色素合酶基因SmANS及醛脱氢酶基因SmALDH的特异探针。根据SmANS特异探针设计引物,采用PCR从这50个克隆中筛选获得了SmANS的cDNA序列,全长1229bp,编码一个356aa的蛋白质。SmANS在cDNA水平上与同属的翠菊ANS基因高度同源,但同源区域集中在ORF区域,达到80%,mRNA 预测二级结构十分复杂;推测氨基酸序列与翠菊ANS同源性达到82.9%。SmANS属于2OG-FeII_Oxy家族,在2OG-FeII_Oxy结构域高度保守,与翠菊、甜橙ANS保守结构域同源性达到94%。预测蛋白二级结构以α-螺旋-β-折叠为主,由7个主螺旋和11个主β-折叠及随机结构连接而成,并具有2OG-FeII_Oxy家族活性中心的三个保守的组氨酸残基(His84、His235、His291)和一个天冬氨酸残基(Asp237)。 6. 根据微型EST库中获得的SmALDH特异探针设计引物,采用PCR从这50个克隆中筛选获得了SmALDH基因cDNA 序列,全长1664bp,编码一个491aa的蛋白质。SmALDH基因cDNA具有独特的碱基组成,3/-UTR富含A+T,占该区域碱基总量的80%,5/-UTR的A+T和G+C各占50%,比ORF区域(52%)还低,因此其mRNA二级结构中5/-UTR可以单独形成自身二级结构并且十分稳定,这可能影响基因的表达。这一现象在水稻、玉米等植物中也存在。SmALDH在cDNA水平上在ORF区域与拟南芥、藏红花、水稻等具有较高同源性,分别为64.03%、63.89%、63.72%,但在推测蛋白氨基酸序列水平上同源性反而较低,分别为54.9%、54.3%、54.0%。SmALDH缺少线粒体定位信号,为胞质醛脱氢酶,具有一个Aldedh 保守结构域,还具有与1OF7-H相似的以α-螺旋-β-折叠为主的二级结构,由10个主螺旋和15个主β-折叠及随机结构连接而成。由于ALDH在植物细胞乙醇发酵中具有解除醛类物质毒害的功能,因此SmALDH基因的克隆为改造细胞自身以适应发酵培养条件,解决水母雪莲细胞大规模培养中需氧问题提供了可能。

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Different species of Leishmania can cause a variety of medically important diseases, whose control and treatment are still health problems. Telomere binding proteins (TBPs) have potential as targets for anti-parasitic chemotherapy because of their importance for genome stability and cell viability. Here, we describe LaTBP1 a protein that has a Myb-like DNA-binding domain, a feature shared by most double-stranded telomeric proteins. Binding assays using full-length and truncated LaTBP1 combined with spectroscopy analysis were used to map the boundaries of the Myb-like domain near to the protein only tryptophan residue. The Myb-like domain of LaTBP1 contains a conserved hydrophobic cavity implicated in DNA-binding activity. A hypothetical model helped to visualize that it shares structural homology with domains of other Myb-containing proteins. Competition assays and chromatin immunoprecipitation confirmed the specificity of LaTBP1 for telomeric and GT-rich DNAs, suggesting that LaTBP1 is a new TBP. (C) 2007 Elsevier B.V. All rights reserved.

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The purpose of this study was to investigate the role of the c-KIT receptor in the progression of human melanoma and the mechanism(s) for the regulation of c-KIT gene expression in human melanoma.^ The molecular changes associated with the transition of melanoma cells from radial growth phase (RGP) to vertical growth phase (VGP) (metastatic phenotype) are not well-defined. Expression of the tyrosine-kinase receptor c-KIT progressively decreases during local tumor growth and invasion of human melanomas. To provide direct evidence that the metastasis of human melanoma is associated with the loss of c-KIT expression, highly metastatic A375SM cells, which express very low or undetectable levels of c-KIT, were tranduced with the human c-KIT gene. We demonstrated that enforced c-KIT expression in highly metastatic human melanoma cells significantly suppressed their tumorigenicity and metastatic propensity in nude mice. In addition, we showed that the ligand for c-KIT, SCF, induces apoptosis in human melanoma cells expressing c-KIT under both in vitro and in vivo conditions. These results suggest that loss of c-KIT receptor may allow malignant melanoma cells to escape SCF/c-KIT-mediated apoptosis, thus contributing to tumor growth and eventually metastasis.^ Furthermore, we investigated the possible mechanism(s) for the down-regulation of c-KIT gene expression in malignant melanoma. Sequence analysis of the c-KIT promoter indicated that this promoter contains several consensus binding-site sequences including three putative AP2 and two Myb sites. Although Myb was shown to be associated with c-KIT expression in human hemotopoietic cells, we found no correlation between c-KIT expression and Myb expression in human melanoma cell lines. In contrast, we showed that c-KIT expression directly correlates with expression of AP2 in human melanoma cells. We found that highly metastatic cells do not express the transcription factor AP2. Expression of AP2 in A375SM cells (c-KIT-negative and AP2-negative) was enough to restore luciferase activity driven by the c-KIT promoter in a dose-dependent manner. On the other hand, co-expression of the dominant-negative form of AP2 (AP2B) in Mel-501 cells (c-KIT-positive and AP2-positive) resulted in two-fold reduction in luciferase activity. Electrophoretic mobility shift assays revealed that the c-KIT promoter contains functional AP2 binding sites which could associate with AP2 protein. Endogenous c-KIT gene expression levels were elevated in AP2 stably-transfected human melanoma A375SM cells. Expression of exogenous AP2 in A375SM cells inhibited their tumorigenicity and metastatic potential in nude mice. The c-KIT ligand, SCF, also induced apoptosis in the AP2 stably-transfected A375SM cells. The identification of AP2 as an important regulator for c-KIT expression suggests that AP2 may have tumor growth and metastasis inhibitory properties, possibly mediated through c-KIT/SCF effects on apoptosis of human melanoma cells. Since AP2 binding sites were found in the promoters of other genes involved in the progression of human melanoma, such as MMP2 (72 kDa collagenase), MCAM/MUC18 and P21/WAF-1, our findings suggest that loss of AP2 expression might be a crucial event in the development of malignant melanoma. ^

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The promoter of the bean PAL2 gene (encoding phenylalanine ammonia-lyase; EC 4.3.1.5) is a model for studies of tissue-restricted gene expression in plants. Petal epidermis is one of the tissues in which this promoter is activated in tobacco. Previous work suggested that a major factor establishing the pattern of PAL2 expression in tobacco petals is the tissue distribution of a protein closely related to Myb305, which is a Myb-like transcriptional activator from snapdragon. In the present work, we show that Myb305 expression in tobacco leaves causes ectopic activation of the PAL2 promoter. To achieve Myb305 expression in planta, a viral expression vector was used. This approach combines the utility of transient assays with the possibility of direct biochemical detection of the introduced factor and may have wider application for studying the function of plant transcription factors.