Mathematical analysis of activation thresholds in enzyme-catalyzed positive feedbacks: application to the feedbacks of blood coagulation.

A hierarchy of enzyme-catalyzed positive feedback loops is examined by mathematical and numerical analysis. Four systems are described, from the simplest, in which an enzyme catalyzes its own formation from an inactive precursor, to the most complex, in which two sequential feedback loops act in a cascade. In the latter we also examine the function of a long-range feedback, in which the final enzyme produced in the second loop activates the initial step in the first loop. When the enzymes generated are subject to inhibition or inactivation, all four systems exhibit threshold properties akin to excitable systems like neuron firing. For those that are amenable to mathematical analysis, expressions are derived that relate the excitation threshold to the kinetics of enzyme generation and inhibition and the initial conditions. For the most complex system, it was expedient to employ numerical simulation to demonstrate threshold behavior, and in this case long-range feedback was seen to have two distinct effects. At sufficiently high catalytic rates, this feedback is capable of exciting an otherwise subthreshold system. At lower catalytic rates, where the long-range feedback does not significantly affect the threshold, it nonetheless has a major effect in potentiating the response above the threshold. In particular, oscillatory behavior observed in simulations of sequential feedback loops is abolished when a long-range feedback is present.

Gerenciamento de resíduos sólidos municipais e os sistemas complexos: a busca da sustentabilidade e a proposta de cobrança da coleta em Santo André-SP

O gerenciamento de resíduos sólidos municipais não vem contemplando adequadamente a multidimensionalidade da realidade urbana num mundo globalizado e pouco tem auxiliado na necessária transformação dos padrões de consumo nas comunidades locais. Face a incerteza inerente dos sistemas sociais, a complexidade vem sendo, progressivamente, reconhecida como a expressão paradigmática dessa realidade. Neste trabalho, desenvolve-se o conceito de sistema de resíduos sólidos sob a perspectiva de um sistema complexo, assim como caracteriza-se a dinâmica das suas interações. A partir dessa concepção teórica, discute-se a busca da sustentabilidade por meio do gerenciamento de resíduos e as formas de complexificar a sua metodologia de atuação, na qual a cobrança da coleta de resíduos domiciliares é identificada como um importante instrumento neste processo. Propõe-se um modelo de cobrança desses serviços cuja viabilidade é verificada na simulação feita para o município de Santo André-SP. Levanta-se, ainda, dados sobre as formas de cobrança existentes em diversos municípios e a situação dos serviços de limpeza urbana no Brasil. Conclui-se que o gerenciamento de resíduos sólidos deve ser executado no âmbito de uma política pública local para o setor e que o modelo de cobrança proposto tem maior aplicabilidade em cidades de médio a grande porte.

Abrasão-corrosão em corpos moedores na moagem de minério de ferro.

O desgaste de corpos moedores constitui um custo importante na indústria mineral, que depende da operação de cominuição para promover a liberação das espécies minerais e produzir concentrados. Embora se conheça alguns dos mecanismos individuais que afetam o desgaste, a interação entre eles num sistema tão complexo quanto um moinho ainda precisa ser melhor entendido. Este trabalho avaliou o efeito da corrosão no desgaste de bolas de aço e de ferro fundido branco de alto cromo durante a moagem de minério de ferro, através de ensaios eletroquímicos e de desgaste em moinho de laboratório. Foi feita uma alteração no modo tradicional de realização do ensaio de polarização potenciodinâmica, utilizando polpa de minério de ferro a 70% de sólidos (em peso) como eletrólito. As curvas de polarização obtidas foram compatíveis com os resultados de desgaste, de modo que as curvas correspondentes aos metais na condição mais ativa estavam associadas às menores taxas de desgaste nos ensaios de moagem em laboratório, demonstrando que os ensaios de polarização realizados podem ser utilizados como indicativo do comportamento do metal na moagem de minério de ferro. Sobretudo, os testes demonstraram que o desgaste das bolas de aço é devido, principalmente, à abrasão, já que uma pequena diferença, de apenas 8%, foi observada nas taxas de desgaste nas condições avaliadas (polpa no pH 5 e pH 8). Por outro lado, as bolas de ferro fundido branco de alto cromo, que são mais caras, são mais propensas a resistir ao desgaste em polpa ácida, em que a taxa de desgaste foi 40% menor que a determinada em pH 8.

La infraestructura hidráulica y la gestión del agua en los regadíos tradicionales en la Vega Baja del Segura (Alicante)

La agricultura tradicional de la comarca de la Vega Baja del Segura se asienta sobre la llanura aluvial creada por el río a lo largo de la historia. Cuenta con una superficie regable de unos 190 km2 que se nutre con recursos propios de la cuenca del río Segura. Las aguas son desviadas del río mediante azudes y distribuidas, por simple gravedad, a través de un complejo sistema de acueductos, acequias y azarbes, que configuran sendas redes de aguas vivas y de aguas muertas, permitiendo la reutilización de las aguas. El presente trabajo tiene por finalidad el estudio de las infraestructuras hidráulicas y su papel en la gestión de los recursos hídricos para el riego en la comarca de la Vega Baja del Segura. A tal fin, se ha consultado la bibliografía y recabado información en diferentes juzgados de aguas, sindicatos de riego y comunidades de regantes, complementándose todo ello con visitas de campo para la toma de datos e imágenes. Los resultados obtenidos muestran una gestión eficiente de los escasos recursos hídricos disponibles y un aprovechamiento óptimo de los mismos, en cuanto que, al final, el sistema cede sus aguas sobrantes a otros regadíos para ser reutilizadas.

Data analysis using circular causality in networks

Complex systems in causal relationships are known to be circular rather than linear; this means that a particular result is not produced by a single cause, but rather that both positive and negative feedback processes are involved. However, although interpreting systemic interrelationships requires a language formed by circles, this has only been developed at the diagram level, and not from an axiomatic point of view. The first difficulty encountered when analysing any complex system is that usually the only data available relate to the various variables, so the first objective was to transform these data into cause-and-effect relationships. Once this initial step was taken, our discrete chaos theory could be applied by finding the causal circles that will form part of the system attractor and allow their behavior to be interpreted. As an application of the technique presented, we analyzed the system associated with the transcription factors of inflammatory diseases.

An introduction to alysidal algebra (V): phenomenological components

Purpose – This paper aims to refer to a subjective approach to a type of complex system: human ecosystems, referred to as deontical impure systems (DIS) to capture a set of properties fundamental to the distinction between human and natural ecosystems. There are four main phenomenological components: directionality, intensity, connection energy and volume. The paper establishes thermodynamics of deontical systems based on the Law of Zipf and the temperature of information. Design/methodology/approach – Mathematical and logical development of human society structure. Findings – A fundamental question in this approach to DIS is the intensity or forces of a relation. Concepts are introduced as the system volume and propose a system thermodynamic theory. It hints at the possibility of adapting the fractal theory by introducing the fractal dimension of the system. Originality/value – This paper is a continuation of other previous papers and developing the theory of DIS.

Coverage and invariability in fuzzy systems

This paper presents a new complex system systemic. Here, we are working in a fuzzy environment, so we have to adapt all the previous concepts and results that were obtained in a non-fuzzy environment, for this fuzzy case. The direct and indirect influences between variables will provide the basis for obtaining fuzzy and/or non-fuzzy relationships, so that the concepts of coverage and invariability between sets of variables will appear naturally. These two concepts and their interconnections will be analyzed from the viewpoint of algebraic properties of inclusion, union and intersection (fuzzy and non-fuzzy), and also for the loop concept, which, as we shall see, will be of special importance.

Sulfur-isotope analyses of gypsium samples from the Southeast Greenland margin, southern Alaska and Gulf of Alaska (Table 1)

Gypsum grains were identified in Miocene-Pleistocene sediment cores from two deep-water ODP sites, Site 918 off the SE Greenland margin and Site 887 in the Gulf of Alaska, and in Holocene sediment cores from shallow-water localities in Disenchantment Bay and Muir Inlet in southern Alaska. Although initial morphologic and textural observations suggested a complex system in which the gypsum may have had more than one origin, quantitative sulfur isotope analyses of the gypsum provide evidence of its detrital nature. d34S values in gypsum from southern Alaska range between +0.0 and +7.1 per mil. Gypsum has d34S values between -27.1 and -27.5 per mil in the Gulf of Alaska and values between -28.5 and +0.2 per mil off the SE Greenland margin. All of these isotopic signatures are too highly depleted in d34S to have precipitated from seawater, present or past. In addition there is no significant change in d34S values for gypsum crystals with differing physical characteristics (abraded vs. unabraded) from the same stratigraphic horizon, suggesting all the gypsum is detrital regardless of the degree of abrasion. The isotopic and physical evidence, in combination with the onshore geology the environmental setting, and site characteristics of the gypsum-bearing marine localities, lead us to propose that the ultimate source of the gypsum is precipitation from freeze-induced terrestrial sediment or soil brines. Furthermore the combined evidence suggests that the subsequent occurrence of gypsum in glacimarine sediments results from ice-rafting (by icebergs or sea ice) of the frozen regolith and/or, in the proximal glacimarine setting of southern Alaska, very rapid burial via turbidity currents.

Selecting Contexts. One Method of Selecting Contexts for Theatre Historiography

In principle, the world and life itself are the contexts of theatrical events. The term context is broad and thus seems hardly usable. It only makes sense to use the term when terminologies and methodologies determine which parts of their contexts are to be incorporated and analysed for which theatrical event. This presentation exemplifies a method which is particularly suitable for sensibly selecting the most important contexts for research in theatre history. The complexity of the representation increases continuously from The Presentation of Self in Everyday Life to Brecht’s “Street Scene” and “Everyday Theatre”, portrayals of rulers in feasts and parades to Hamlet productions by the Royal Shakespeare Company or a Wagner opera in Bayreuth. The different forms of theatre thus constitute a continuum which spans from “everyday theatre” to “art theatre”. The representation of the world in this continuum is sometimes questioned by the means of theatre, for example when Commedia dell’arte takes a critical stance towards the representative theatre of the humanists or when playful devices such as reversal, parody and fragmentation challenge the representative character of productions, which is applied by the Vice character for instance. There is a second component that has an impact on the continuum without a theatrical device: attitude, opinion, norms and bans which originate from society. As excerpts of contexts, they refer to single forms of theatre in the continuum. This results in a complex system of four components which evolves from the panorama between the antipodes “everyday theatre” and “art theatre” as well as both spheres of influence of which only one uses theatrical devices. All components interact in a specific time frame in a specific place in a specific way in each case, which can then be described as the theatricality in this time frame. This presentation will deal with what the concept is capable of doing.

Linking surficial geomorphology with vertical structure in high and low energy marine environments

Senior thesis written for Oceanography 445

Crafting a Third Space: Teacher Beliefs and Practices in Curriculum Reform for Multicultural Education

Thesis (Ph.D.)--University of Washington, 2016-06

Optimising care of acute coronary syndromes in three Australian hospitals

Objective. To improve quality of in-hospital care of patients with acute coronary syndromes using a multifaceted quality improvement program. Design. Prospective, before and after study of the effects of quality improvement interventions between October 2000 and August 2002. Quality of care of patients admitted between 1 October 2000 and 16 April 2001 (baseline) was compared with that of those admitted between 15 February 2002 and 31 August 2002 (post-intervention). Setting. Three teaching hospitals in Brisbane, Australia. Study participants. Consecutive patients (n = 1594) admitted to hospital with acute coronary syndrome [mean age 68 years (SD 14 years); 65% males]. Interventions. Clinical guidelines, reminder tools, and educational interventions; 6-monthly performance feedback; pharmacist-mediated patient education program; and facilitation of multidisciplinary review of work practices. Main outcome measures. Changes in key quality indicators relating to timing of electrocardiogram (ECG) and thrombolysis in emergency departments, serum lipid measurement, prescription of adjunctive drugs, and secondary prevention. Results. Comparing post-intervention with baseline patients, increases occurred in the proportions of eligible patients: (i) undergoing timely ECG (70% versus 61%; P = 0.04); (ii) prescribed angiotensin-converting enzyme inhibitors (70% versus 60%; P = 0.002) and lipid-lowering agents (77% versus 68%; P = 0.005); (iii) receiving cardiac counselling in hospital (57% versus 48%; P = 0.009); and (iv) referred to cardiac rehabilitation (17% versus 8%; P < 0.001). Conclusions. Multifaceted approaches can improve care processes for patients hospitalized with acute coronary syndromes. Care processes under direct clinician control changed more quickly than those reliant on complex system factors. Identifying and overcoming organizational impediments to quality improvement deserves greater attention.

ACcESS: Australia's contribution to the iSERVO Institute's development

The new Australian Computational Earth Systems Simulator research facility provides a virtual laboratory for studying the solid earth and its complex system behavior. The facility's capabilities complement those developed by overseas groups, thereby creating the infrastructure for an international computational solid earth research virtual observatory.

Advanced computing for systems biology

Systems biology is based on computational modelling and simulation of large networks of interacting components. Models may be intended to capture processes, mechanisms, components and interactions at different levels of fidelity. Input data are often large and geographically disperse, and may require the computation to be moved to the data, not vice versa. In addition, complex system-level problems require collaboration across institutions and disciplines. Grid computing can offer robust, scaleable solutions for distributed data, compute and expertise. We illustrate some of the range of computational and data requirements in systems biology with three case studies: one requiring large computation but small data (orthologue mapping in comparative genomics), a second involving complex terabyte data (the Visible Cell project) and a third that is both computationally and data-intensive (simulations at multiple temporal and spatial scales). Authentication, authorisation and audit systems are currently not well scalable and may present bottlenecks for distributed collaboration particularly where outcomes may be commercialised. Challenges remain in providing lightweight standards to facilitate the penetration of robust, scalable grid-type computing into diverse user communities to meet the evolving demands of systems biology.

Optimal design of a regenerative dynamic dynamometer using genetic algorithms

This paper presents an approach for optimal design of a fully regenerative dynamic dynamometer using genetic algorithms. The proposed dynamometer system includes an energy storage mechanism to adaptively absorb the energy variations following the dynamometer transients. This allows the minimum power electronics requirement at the mains power supply grid to compensate for the losses. The overall dynamometer system is a dynamic complex system and design of the system is a multi-objective problem, which requires advanced optimisation techniques such as genetic algorithms. The case study of designing and simulation of the dynamometer system indicates that the genetic algorithm based approach is able to locate a best available solution in view of system performance and computational costs.