Soluções de melhoria de desempenho acústico na Reabilitação de Edifícios

O presente relatório enquadra-se no âmbito do estágio curricular referente ao Mestrado em Engenharia Civil – Ramo de Construções, do Instituto Superior de Engenharia do Porto. Este relatório tem como objetivo apresentar e descrever de forma sucinta as atividades desenvolvidas na empresa Porto Vivo, SRU – Sociedade de Reabilitação Urbana da Baixa Portuense, S.A., no período compreendido entre 3 de Dezembro de 2012 e 3 de Julho de 2013. O estágio realizou-se por diferentes etapas, sendo numa fase inicial mais relacionada com a pesquisa bibliográfica e enquadramento da temática da reabilitação urbana em Portugal, tendo em seguida estudado e acompanhado o projeto de obras em curso. Esta etapa consistiu, principalmente, no acompanhamento de projetos e obras de reabilitação urbana, no âmbito da atividade da Porto Vivo, SRU, desempenhando inúmeras atividades tais como: contato com técnicos responsáveis pela elaboração dos Documentos Estratégicos, análise dos projetos em curso, acompanhamento de obras de reabilitação urbana, apoio à elaboração de relatórios de acompanhamento das obras, participado em reuniões de obra com empreiteiros e projetistas, elaborado o registo fotográfico de obras particulares e executado o levantamento do edificado. A primeira parte deste relatório enquadra o tema da Reabilitação Urbana, no seu conceito mais lato descrevendo os principais incentivos e programas de apoio inerentes. Refere-se, ainda, à descrição da empresa Porto Vivo, SRU e às atividades aí desenvolvidas. Numa segunda parte do relatório, é descrito o estudo de caso relativo ao desempenho acústico de soluções construtivas no âmbito da reabilitação do património edificado. Por último, uma reflexão final de todo o período de estágio e apreciação global das atividades desenvolvidas e da sua importância na formação pessoal e profissional.

A Rare Variation of the Extensor Indicis Proprius Tendon With Important Clinical Implications

Introduction: Anatomical variations of the extensor tendons to the fingers are of great clinical interest, due to the relatively high frequency of tendon injury in clinical practice. Material and methods: During routine dissection of the right upper limb of a 67-year-old female preserved corpse, the extensor indicis proprius (EIP) muscle belly originated 3 independent tendons, each with a separate fascial sheath, forming a triple EIP tendon. There was a larger tendon, which occupied a central position, that represented the usual single EIP tendon. In addition, there were two thinner radial and ulnar accessory EIP tendons. The radial-EIP tendon crossed deep to the extensor digitorum communis (EDC) tendon to the index finger in the distal half of the dorsum of the hand to reach the radial side of the extensor expansion hood of the index finger. Discussion: According to the literature, the frequency of a triple EIP tendon ranges from 0%, to as high as 7%, although most authors do not acknowledge the presence of this variant in their series. This variant of the EIP tendon, in which the radial-EIP terminated laterally to the termination of the tendon of the EDC to the index finger, may be a source of confusion intraoperatively, as the EIP tendon has traditionally been identified on the basis of its ulnar location with respect to the EDC tendon. Conclusion: The possibility of a triple EIP tendon should certainly be born in mind by all surgeons when performing tendon repairs, tenoplasties or tendon transfers.

Coordenação e gestão de obras em ambiente empresarial

O estágio foi um complemento da formação académica, disponibilizado pelo Instituto Superior de Engenharia do Porto, permitindo o contacto e a inserção do estagiário no mercado de trabalho. Este relatório retrata o percurso realizado durante o estágio, e representa o culminar do Curso de Mestrado em Engenharia civil no Ramo de Gestão de Obras. O estágio, com duração de 6 meses, realizou-se na empresa Cogedir – Gestão de Projetos S.A. sediada em Vila Nova de Gaia. A integração na empresa permitiu adquirir e desenvolver competências que habilitaram o estagiário a prestar funções de direção e fiscalização de obras, pois durante o período de estágio foram atribuídas diversas funções do ramo de gestão, como a coordenação e gestão de obras, resposta a concursos públicos e privados, orçamentação, entre outras, sendo que o estágio se focalizou sobretudo na coordenação e gestão da execução de um empreendimento destinado a um Hotel e Spa na região de Águeda. Este relatório tenta demonstrar que os conhecimentos obtidos ao longo do curso foram devidamente interiorizados e aplicados em ambiente empresarial e para isso serão abordadas as principais funções, responsabilidades e atividades desempenhadas ao longo da execução do empreendimento em foco tentando dar exemplos de cada atividade. Para além disso haverá lugar a um capítulo inteiramente dedicado à gestão do planeamento a nível de prazos e custos de uma das fases de execução do empreendimento. Essa gestão será realizada com recurso à ferramenta de gestão designada por Método EVM, incorporada no programa Microsoft Project 2013. Este método oferece a possibilidade de cálculo de vários indicadores de um projeto e será explicado de forma intuitiva, simples e completa, possibilitando a sua fácil consulta ao longo da vida profissional.

Signal transduction pathways involving the hypertension-related WNK1 and WNK4 protein kinases

Dissertação apresentada para obtenção do Grau de Doutor em Biologia, na especialidade de Genética Molecular, pela Universidade Nova de Lisboa, Faculdade de Ciências e Tecnologia

Dos ciclos e sistemas aos interstícios de Creixomil: entre o seu conhecimento e transformação potencial

Dissertação de mestrado integrado em Arquitectura (área de especialização em Território)

Endemism analysis of Neotropical Pentatomidae (Hemiptera, Heteroptera)

The definition of areas of endemism is central to studies of historical biogeography, and their interrelationships are fundamental questions. Consistent hypotheses for the evolution of Pentatomidae in the Neotropical region depend on the accuracy of the units employed in the analyses, which in the case of studies of historical biogeography, may be areas of endemism. In this study, the distribution patterns of 222 species, belonging to 14 Pentatomidae (Hemiptera) genera, predominantly neotropical, were studied with the Analysis of Endemicity (NDM) to identify possible areas of endemism and to correlate them to previously delimited areas. The search by areas of endemism was carried out using grid-cell units of 2.5° and 5° latitude-longitude. The analysis based on groupings of grid-cells of 2.5° of latitude-longitude allowed the identification of 51 areas of endemism, the consensus of these areas resulted in four clusters of grid-cells. The second analysis, with grid-cells units of 5° latitude-longitude, resulted in 109 areas of endemism. The flexible consensus employed resulted in 17 areas of endemism. The analyses were sensitive to the identification of areas of endemism in different scales in the Atlantic Forest. The Amazonian region was identified as a single area in the area of consensus, and its southeastern portion shares elements with the Chacoan and Paraná subregions. The distribution data of the taxa studied, with different units of analysis, did not allow the identification of individual areas of endemism for the Cerrado and Caatinga. The areas of endemism identified here should be seen as primary biogeographic hypotheses.

Expanding the phenotype and genotype of female GnRH deficiency.

Context: GnRH deficiency is a rare genetic disorder of absent or partial pubertal development. The clinical and genetic characteristics of GnRH-deficient women have not been well-described. Objective: To determine the phenotypic and genotypic spectrum of a large series of GnRH-deficient women. Design, Setting, and Subjects: Retrospective study of 248 females with GnRH deficiency evaluated at an academic medical center between 1980 and 2010. Main Outcome Measures: Clinical presentation, baseline endogenous GnRH secretory activity, and DNA sequence variants in 11 genes associated with GnRH deficiency. Results: Eighty-eight percent had undergone pubarche, 51% had spontaneous thelarche, and 10% had 1-2 menses. Women with spontaneous thelarche were more likely to demonstrate normal pubarche (P = 0.04). In 27% of women, neuroendocrine studies demonstrated evidence of some endogenous GnRH secretory activity. Thirty-six percent (a large excess relative to controls) harbored a rare sequence variant in a gene associated with GnRH deficiency (87% heterozygous and 13% biallelic), with variants in FGFR1 (15%), GNRHR (6.6%), and PROKR2 (6.6%) being most prevalent. One woman had a biallelic variant in the X-linked gene, KAL1, and nine women had heterozygous variants. Conclusions: The clinical presentation of female GnRH deficiency varies from primary amenorrhea and absence of any secondary sexual characteristics to spontaneous breast development and occasional menses. In this cohort, rare sequence variants were present in all of the known genes associated with GnRH deficiency, including the novel identification of GnRH-deficient women with KAL1 variants. The pathogenic mechanism through which KAL1 variants disrupt female reproductive development requires further investigation.

LINGO1 and LINGO2 variants are associated with essential tremor and Parkinson disease.

Genetic variation in the leucine-rich repeat and Ig domain containing 1 gene (LINGO1) was recently associated with an increased risk of developing essential tremor (ET) and Parkinson disease (PD). Herein, we performed a comprehensive study of LINGO1 and its paralog LINGO2 in ET and PD by sequencing both genes in patients (ET, n=95; PD, n=96) and by examining haplotype-tagging single-nucleotide polymorphisms (tSNPs) in a multicenter North American series of patients (ET, n=1,247; PD, n= 633) and controls (n=642). The sequencing study identified six novel coding variants in LINGO1 (p.S4C, p.V107M, p.A277T, p.R423R, p.G537A, p.D610D) and three in LINGO2 (p.D135D, p.P217P, p.V565V), however segregation analysis did not support pathogenicity. The association study employed 16 tSNPs at the LINGO1 locus and 21 at the LINGO2 locus. One variant in LINGO1 (rs9652490) displayed evidence of an association with ET (odds ratio (OR) =0.63; P=0.026) and PD (OR=0.54; P=0.016). Additionally, four other tSNPs in LINGO1 and one in LINGO2 were associated with ET and one tSNP in LINGO2 associated with PD (P<0.05). Further analysis identified one tSNP in LINGO1 and two in LINGO2 which influenced age at onset of ET and two tSNPs in LINGO1 which altered age at onset of PD (P<0.05). Our results support a role for LINGO1 and LINGO2 in determining risk for and perhaps age at onset of ET and PD. Further studies are warranted to confirm these findings and to determine the pathogenic mechanisms involved.

Dissecting TCR-MHC/peptide complex interactions with A2/peptide multimers incorporating tumor antigen peptide variants: crucial role of interaction kinetics on functional outcomes.

Soluble peptide/MHC-class-I (pMHC) multimers have recently emerged as unique reagents for the study of specific interactions between the pMHC complex and the TCR. Here, we assessed the relative binding efficiency of a panel of multimers incorporating single-alanine-substituted variants of the tumor-antigen-derived peptide MAGE-A10(254-262) to specific CTL clones displaying different functional avidity. For each individual clone, the efficiency of binding of multimers incorporating MAGE-A10 peptide variants was, in most cases, in good although not linear correlation with the avidity of recognition of the corresponding variant. In addition, we observed two types of discrepancies between efficiency of recognition and multimer binding. First, for some peptide variants, efficient multimer binding was detected in the absence of measurable effector functions. Some of these peptide variants displayed antagonist activity. Second, when comparing different clones we found clear discrepancies between the dose of peptide required to obtain half-maximal lysis in CTL assays and the binding efficiency of the corresponding multimers. These discrepancies, however, were resolved when the differential stability of the TCR/pMHC complexes was determined. For individual clones, decreased recognition correlated with increased TCR/pMHC off-rate. TCR/pMHC complexes formed by antagonist ligands displayed off-rates faster than those of TCR/pMHC complexes formed with weak agonists. In addition, when comparing different clones, the efficiency of multimer staining correlated better with relative multimer off-rates than with half-maximal lysis values. Altogether, the data presented here reconcile and extend our previous results on the impact of the kinetics of interaction of TCR with pMHC complexes on multimer binding and underline the crucial role of TCR/pMHC off-rates for the functional outcome of such interactions.

Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization.

Chromatin immunoprecipitation followed by deep sequencing (ChIP-seq) experiments are widely used to determine, within entire genomes, the occupancy sites of any protein of interest, including, for example, transcription factors, RNA polymerases, or histones with or without various modifications. In addition to allowing the determination of occupancy sites within one cell type and under one condition, this method allows, in principle, the establishment and comparison of occupancy maps in various cell types, tissues, and conditions. Such comparisons require, however, that samples be normalized. Widely used normalization methods that include a quantile normalization step perform well when factor occupancy varies at a subset of sites, but may miss uniform genome-wide increases or decreases in site occupancy. We describe a spike adjustment procedure (SAP) that, unlike commonly used normalization methods intervening at the analysis stage, entails an experimental step prior to immunoprecipitation. A constant, low amount from a single batch of chromatin of a foreign genome is added to the experimental chromatin. This "spike" chromatin then serves as an internal control to which the experimental signals can be adjusted. We show that the method improves similarity between replicates and reveals biological differences including global and largely uniform changes.

Vitamine D: actualité et recommandations [Vitamin D: update and recommendations].

The number of studies related to vitamin D has increased exponentially in recent years and it becomes difficult to integrate these data into daily practice. This article focuses on the practice by offering an overview on screening, needs, treatment and consequences of deficiency. While in some areas, a consensus seems to emerge, other issues still require a lot of research in order to have an impact on practice. Independently of the threshold values we use, there is an increased prevalence, which makes vitamin D deficiency the most common and also the most underdiagnosed deficiency. Vitamin D is like a marker of good health and a marker of the evolution of our society. How can be used this marker by the practitioner?

Recherche de l'expression de la lamine A et de la progérine chez des patients avec un syndrome myélodysplasique/syndrome myéloprolifératif avec thrombocytose

Les syndromes myélodysplasiques (SMD) et myéloprolifératifs (SMP) sont des maladies qui touchent les cellules souches de la moelle hématopoïétique. Les symptômes varient selon le sous-type de SMD ou SMP allant de l'anémie à la polyglobulie, de la leucopénie à la leucocytose et de la thrombopénie à la thrombocytose. Ces syndromes se développent à la suite de mutations acquises qui provoquent des anomalies des cellules souches. En outre, plusieurs études ont mis en évidence des anomalies de processus épigénétiques comme l'hyperméthylation de l'ADN et la déacéthylation des histones. La maladie de Hutchinson-Gilford ou progéria est provoquée par une mutation sur le gène de la lamine A (protéine de l'enveloppe nucléaire) qui a pour conséquence l'augmentation de l'utilisation d'un site de splicing normalement peu utilisé ce qui engendre une protéine anormale, la progérine. Cette protéine a pour effet de modifier les processus épigénétiques. Une étude récente sur des patients souffrant de progéria a révélé la présence d'une thrombocytose chez tous les patients. Le but du présent travail a été d'étudier l'expression de la lamine A et de la progérine chez les patients souffrant de SMD ou SMP avec une thrombocytose suivis par le Service d'hématologie du CHUV. Nous avons sélectionné parmi les patients souffrant de SMD ou SMP ceux avec une thrombocytose supérieure à 400 G/l au moment du diagnostic. Nous avons ensuite effectué une PCR pour détecter la lamine A et la mutation de la lamine A que l'on trouve dans la progéria. Sur les 33 patients sélectionnés, nous avons pu analyser les échantillons de 18 d'entre eux. Le matériel était issu de cellules mononucléées ou de granulocytes. Les résultats démontrent la présence de la lamine A et l'absence de la mutation trouvée dans la progéria chez 16 patients. Cependant, chez 2 patients, la PCR laisse suspecter la présence de progérine en plus de celle de la lamine A. D'autres investigations seront nécessaires pour confirmer cette dernière observation. S'il s'avère que la progérine est effectivement présente chez ces deux patients, il faudrait étendre l'analyse à d'autres patients avec une hémopathie maligne. Plusieurs publications rapportent l'absence de lamine A dans les cellules hématopoïétiques. Cependant, le présent travail démontre clairement que les cellules mononucléées du sang ou de la moelle osseuse de certains patients avec SMP/SMD expriment la lamine A. Nous n'avons toutefois pas étudié si la lamine A et, éventuellement la progérine, sont exprimées par les cellules hématopoïétiques normales. En conclusion, ce travail a révélé qu'il serait très intéressant d'étudier le rôle potentiel des lamines nucléaires et en particulier de la lamine A et de la progérine dans l'hématopoïèse et le développement des SMD/SMP et d'autres hémopathies malignes. Il a donc ouvert la voie pour de futurs projets de recherche.

Kaivinkoneiden tuottavuus, työnjälki ja kustannukset maanmuokkauksessa turvemailla

Summary: Productivity, work quality and operation costs of excavators in site preparation on peatlands

New loci associated with birth weight identify genetic links between intrauterine growth and adult height and metabolism.

Birth weight within the normal range is associated with a variety of adult-onset diseases, but the mechanisms behind these associations are poorly understood. Previous genome-wide association studies of birth weight identified a variant in the ADCY5 gene associated both with birth weight and type 2 diabetes and a second variant, near CCNL1, with no obvious link to adult traits. In an expanded genome-wide association meta-analysis and follow-up study of birth weight (of up to 69,308 individuals of European descent from 43 studies), we have now extended the number of loci associated at genome-wide significance to 7, accounting for a similar proportion of variance as maternal smoking. Five of the loci are known to be associated with other phenotypes: ADCY5 and CDKAL1 with type 2 diabetes, ADRB1 with adult blood pressure and HMGA2 and LCORL with adult height. Our findings highlight genetic links between fetal growth and postnatal growth and metabolism.

Autoimmunity-Associated LYP-W620 Does Not Impair Thymic Negative Selection of Autoreactive T Cells.

A C1858T (R620W) variation in the PTPN22 gene encoding the tyrosine phosphatase LYP is a major risk factor for human autoimmunity. LYP is a known negative regulator of signaling through the T cell receptor (TCR), and murine Ptpn22 plays a role in thymic selection. However, the mechanism of action of the R620W variant in autoimmunity remains unclear. One model holds that LYP-W620 is a gain-of-function phosphatase that causes alterations in thymic negative selection and/or thymic output of regulatory T cells (Treg) through inhibition of thymic TCR signaling. To test this model, we generated mice in which the human LYP-W620 variant or its phosphatase-inactive mutant are expressed in developing thymocytes under control of the proximal Lck promoter. We found that LYP-W620 expression results in diminished thymocyte TCR signaling, thus modeling a "gain-of-function" of LYP at the signaling level. However, LYP-W620 transgenic mice display no alterations of thymic negative selection and no anomalies in thymic output of CD4(+)Foxp3(+) Treg were detected in these mice. Lck promoter-directed expression of the human transgene also causes no alteration in thymic repertoire or increase in disease severity in a model of rheumatoid arthritis, which depends on skewed thymic selection of CD4(+) T cells. Our data suggest that a gain-of-function of LYP is unlikely to increase risk of autoimmunity through alterations of thymic selection and that LYP likely acts in the periphery perhaps selectively in regulatory T cells or in another cell type to increase risk of autoimmunity.