The fish fauna in the fish passage at the Ourinhos Dam, Paranapanema River

The composition and abundance of the fish assemblage were evaluated in the fish ladder of Ourinhos Dam, the newest dam (closed in 2005) in the cascade of dams constructed on the Paranapanema River. Samplings were carried out three times on a diel cycle, in three sampling periods, two in the warm season and one in the cold season of 2008 - 2009. The ladder was closed and emptied and the entire fish assemblage was sampled and identified. Most individuals were released alive downstream of the dam. The assemblage found in the ladder was compared with the fish fauna sampled in the reservoir and in downstream sites, in the same period. Twenty seven species and a total of 4682 individuals were caught in the ladder. Pimelodus maculatus was the only migratory species, which was caught in low number in the ladder (0.04% of the total captured), where small sedentary species predominated. The most abundant species were the non-migratory Apareiodon affinis, Bryconamericus stramineus, Astyanax fasciatus and Parodon nasus. Individuals observed in the ladder's window were moving up-and down the passage. The fish ladder is a microhabitat inhabited by an abundant association of benthic organisms that is probably used as a food resource for the fish assemblage in the ladder. The similarity between the fish fauna in the ladder and that of the Ourinhos Reservoir was low (26%). The species richness of migrants in the stretch between the uspstream reservoir (Chavantes) and the downstream one (Salto Grande), before the Ourinhos dam closure (23 species) was reduced to 16 and 12 species in Salto Grande and Ourinhos reservoirs, respectively, after the dam closure, and to a single species in the ladder.

Rapid assessment survey for exotic benthic species in the São Sebastião Channel, Brazil

The study of biological invasions can be roughly divided into three parts: detection, monitoring, mitigation. Here, our objectives were to describe the marine fauna of the area of the port of São Sebastião (on the northern coast of the state of São Paulo, in the São Sebastião Channel, SSC) to detect introduced species. Descriptions of the faunal community of the SSC with respect to native and allochthonous (invasive or potentially so) diversity are lacking for all invertebrate groups. Sampling was carried out by specialists within each taxonomic group, in December 2009, following the protocol of the Rapid Assessment Survey (RAS) in three areas with artificial structures as substrates. A total of 142 species were identified (61 native, 15 introduced, 62 cryptogenic, 4 not classified), of which 17 were Polychaeta (12, 1, 1, 3), 24 Ascidiacea (3, 6, 15, 0), 36 Bryozoa (17, 0, 18, 1), 27 Cmdana (2, 1, 24, 0), 20 Crustacea (11, 4, 5, 0), 2 Entoprocta (native), 16 Mollusca (13, 3, 0, 0). Twelve species are new occurrences for the SSC. Among the introduced taxa, two are new for coastal Brazil. Estimates of introduced taxa are conservative as the results of molecular studies suggest that some species previously considered cryptogenic are indeed introduced. We emphasize that the large number of cryptogenic species illustrates the need for a long-term monitoring program, especially in areas most susceptible to bioinvasion. We conclude that rapid assessment studies, even in relatively well-known regions, can be very useful for the detection of introduced species and we recommend that they be carried out on a larger scale in all ports with heavy ship traffic.

Polychaete fauna of the Northwest Portuguese Coastal Shelf: ecology, diversity and distribution

Polychaetes are one of the larger groups of macroinvertebrates with more than 9000 species recognised, distributed worldwide. Thanks to the broad ecological adaptability and high abundaces, this taxon plays a leading role and is considered an important component of all benthic assemblages. Our knowledge about the West Iberian Coast polychaete fauna are scarce, and the only studies are recent. In this sense, the aim of this work was to investigate the composition and the spatial distribution of the polychaete fauna along the NW Portuguese Coastal Shelf, focusing on their relationship to environmental factors (depth, grain size, longitude and latitude) and to add new data to the existing biological dataset. A total of 39 sites were analysed, collected in an area of about 5665 km², between 20 and 150 m depth, distributed in a way to cover the overall grain size gradient. A total of 9352 specimens belonging to 41 families were found, and the analysis based on the abundance of polychaete species revealed five affinity groups: (a) nearshore medium sand characterised by Pisione parapari and Hesionura elongata; (b) very coarse sand that showed the highest abundance of Syllidae and was characterised by Protodorvillea kefersteini and Syllis garciai; (c) fine sand dominated by Spiophanes bombyx and Glycera tridactyla; (d) very fine sand with Nepthys assimilis and Amage sp. and the highest abundance of Paraonidae; (d) mud characterised by Labioleanira yhleni and Ampharete finmarchica. The combination of the environmental variables and the biological data, done with BIOENV routine, demonstrated that depth, grain size and fine contents were the best related with the biological data (rho=0.598). In general, the results agree with the composition and the spatial distribution of the polychaete fauna in other parts of the world; further polychaete assemblages related to mud sediments were firstly recorded in the Northwestern Portuguese Coastal Shelf.

Benthic and planktonic foraminifera of sediment core GIK17957-2

A detailed age model for core 17957-2 of the southern South China Sea was developed based on delta18O, coarse fraction, magnetostratigraphy, and biostratigraphy for the last 1500 kyr. The delta18O record has clear ~100-kyr cycles after the Mid-Pleistocene Revolution (MPR) at the entrance of marine isotopic stage (MIS) 22. Planktonic foraminifera responded to the MPR immediately, showing the increased sea surface temperature (SST) and dissolution after the MPR. Benthic foraminifera did not respond to it until the Brunhes/Matuyama boundary. Since the MPR, the depth of thermocline gradually became shallower until MISs 6-5. This major change within MISs 6-5 was also reflected in the decreased SSTs and increased productivity and Deep Water Mass. Thus two major Pleistocene paleoceanographic changes were found: One was around the MPR; the other occurred within MISs 6-5, which speculatively might be ascribed to the reorganization of surface and deep circulation, possibly induced by tectonic forces.

Fauna composition of benthos communities in bottom sediments from the edge and the central part of the shelf in the California upwelling zone

Two shelf communities from the central part off the California Peninsula are described. The community of Amphiodia urtica - Nephtys ferruginea develops in the central part of the shelf within the depth range 95-105 m. The community of Nephtys ferruginea - Amphiura acrystata develops on the shelf edge at depth 110 m. Biomasses of both communities are very low (about 10 g/m**2). Species richness of the shelf community is high; more than 60 species occur in samples (43-51 species per a community). Various echinoderms and some other groups are abundant on the Californian shelf; these groups are absent in shelf areas of Peruvian and Benguela upwellings. Species structures of the communities were analyzed; the communities were shown to consist of coexisting, but not interacting guilds; this indicates that the communities are undersaturated with individuals. At the same time values of ABC-indices indicate that the communities are stable. We suggest that in this case adaptation to unfavorable but stable environment is observed (selection of species-stressolarents). An explanation seems to lie in the penetrating type of the upwelling in the Californian upwelling zone. Low biomass values seem to result from mass development of necto-benthic carnivorous crustaceans-galateids Pleuroncodes planiceps.

Benthic foraminifera in Lower Cretaceous sediments from various DSDP samples

From the DSDP Legs 1, 11, 13, 17, 25, 27, 32, 36, 41, 43, 44, 50, and 62 the Lower Cretaceous foraminifers have been investigated for biostratigraphical, taxonomical, and palaeoecological purposes. An overview of the cored Lower Cretaceous sections of Leg 1-80 is given. In the Northern Atlantic Ocean characteristic foraminiferal faunas are missing from the Upper Tithonian to the Valanginian due to a marked regression which caused hiatuses. In areas without black shale conditions Valanginian to Barremian medium rich to poor microfaunas with Praedorothia ouachensis (Sigal) of the Praedorothia ouachensis Zone (Valanginian-Hauterivian). The Hauterivian-Aptian interval is characterized by zones of Gavelinella barrerniana, Gaudryina dividens, and Conorotalites aptiensis. During the Albian a world-wide fauna consisting of agglutinated and calcareous foraminifers of the Pseudoclavulina gaultina Zone is established in areas lacking the wide-spread black-shale conditions. The Upper Albian and the Cenomanian are represented by the Gavelinella eenomanica Zone. Some ornamented species of the nodosariids (Citharina, Lenticulina), Gavelinella, Conorotatites, Pleurostomella, Vatvulineria, and Osangularia are of some importance for the biostratigraphy of the Berriasian-Albian interval. The Berriasian to Albian zones introduced for the Tethys and the DSDP by Moullade (1984) could only be of some local importance due to the long stratigraphical range of the foraminiferal species used. In the Indian Ocean an exact stratigraphical age cannot be assigned to the few Neocomian foraminiferal faunas of a cooler sea water (Site 261). These faunas mainly contain primitive agglutinated foraminifers, because in most cases the calcareous tests are dissolved or redeposited. In the Pacific Ocean most of the Berriasian to Aptian microfaunas are of minor biostratigraphical and palaeoecological importance for reasons of poor core recoveries, contaminations or original foraminiferal poverty (black shales). Since the Albian there are somewhat higher-diverse faunas of calcareous and agglutinated foraminifers with index species of the Pseudoclavulina gaultina Zone. As a rule, the boundary Albian/Cenomanian is set by means of planktonic foraminifers because no other foraminifer has its first appearance datum during this interval, except Gavelinella cenornanica. During the Albian very uniform, world-wide foraminiferal faunas without a marked provincialism are obvious.

Benthic foraminifera in surface sediments of the Gulf of Lions

Surface sediment was sampled at two bathyal sites in the southwestern Gulf of Lions in the western Mediterranean Sea in February and August 1997 to study the distribution and microhabitat of living (Rose Bengal stained) deep sea benthic foraminifera. Both standing stock and diversity of the faunas, and the microhabitat of distinct species mirror the trophic situation and the depth of the oxidised layer at the different sites. Our results suggest that the faunas do not comprise highly opportunistic species and are adapted to rather stable environments. In the axial channel of the Lacaze-Duthiers Canyon, organic matter fluxes are enhanced due to advective transport of organic matter resulting in elevated oxygen consumption rates in the surface sediment and a rather thin oxidised layer. The corresponding benthic foraminiferal fauna is characterised by rather high standing stock and diversity, and a well-developed deep infauna. In addition to freshly deposited phytodetritus, more degraded organic matter seems to be an important food source. In contrast, at the open slope, organic matter fluxes and oxygen consumption rates in the surface sediment are lower and the oxidised layer is much thicker than inside the canyon. The corresponding benthic foraminiferal fauna comprises mainly epifaunal and shallow-infaunal species with much lower standing stocks and clear differences between February and August. In August standing stocks are higher and the average living depths of most species shift towards the sediment surface. These differences can be attributed to patchiness or represent a seasonal trophic signal.

Middle Eocene to early Oligocene planktonic and benthic foraminifers from ODP Hole 125-786A

Drilling at Site 786, located in the center of the Izu-Bonin forearc basin, penetrated an apparently continuous section of middle Eocene/lower Oligocene volcaniclastic breccias and nannofossil oozes. Planktonic foraminiferal faunas underwent a gradual transition from relatively high-diversity middle Eocene through late Eocene tropical or warm-water assemblages to a cooler-water, less diverse assemblage during the early Oligocene. In the cosmopolitan benthic foraminiferal faunas, the major transition occurred during the early late Eocene. Middle Eocene benthic assemblages resembling the bathyal 'Lenticulina' fauna (characterized by Osangularia mexicana, Cibicidoides eocaenus, and several buliminid species) changed to an upper Eocene abyssal 'Globocassidulina subglobosa' fauna (characterized by Cibicidoides praemundulus, Globocassidulina subglobosa, Gyroidinoides girardanus, Oridorsalis umbonatus, and Siphonodosaria aculeata). Even though no large, abrupt faunal changes appear to have been associated with the assumed Eocene/Oligocene boundary, benthic species turnover continued through the late Eocene and into the early Oligocene. This resulted in a slightly lower diversity early Oligocene fauna dominated by three species: Laevidentalina sp., Bulimina jarvisi, and Gyroidinoides girardanus. The progression from a middle Eocene bathyal 'Lenticulina' fauna, rather than an abyssal 'Nuttallides truempyi' fauna, to an abyssal 'Globocassidulina subglobosa' fauna during the early late Eocene, suggests that a bathymetric deepening occurred at Site 786. Increased water depths may have resulted from tectonic subsidence.

Ostracode fauna of sediment core GIK23414-9 in the northeast Atlantic

Sediment core M23414 from the Rockall Plateau (North Atlantic) covering the last two climatic cycles, marine isotope stages (MIS) 7 to 1, was investigated for glacial-interglacial variations in the deep-sea benthic ostracode fauna. A highly diversified ostracode fauna including 98 species was found. Two climate-related assemblages were identified, associated with interglacial and peak glacial periods, respectively. The 'interglacial' group occurs during the end of MIS 7, 5 and 1 and is composed of the genera Henryhowella, Pelecocythere, Echinocythereis, Cytherella, Bradleya, Aversovalva and Eucytherura. The 'glacial' group consists of the genera Acetabulastoma (which is known as 'sea ice indicator' in the modern Arctic Ocean), Polycope, Bythoceratina, ?Rhombobythere, and some species possibly belonging to the genus Pseudocythere and is found during MIS 6, 4 and 2. These longer-term variations within the ostracode fauna seem related to the particular glacial and interglacial climate conditions that affected both deep-water production as well as primary production in the surface waters. However, a detailed comparison of ostracode abundances with the occurrence of events marked by increased ice-rafted debris reveals also much shorter-term climate related changes in the ostracode fauna. Thus, the temporal fluctuations within ostracode assemblages reflect long- and short-term alterations of the deep-sea environment that are clearly linked to climate changes.

Benthic foraminifera abundance data of sediment core GeoB7926-2

We present a high resolution, multiproxy study of the relationship between pelagic and benthic environments of a coastal upwelling system in the subtropical NE Atlantic Ocean. Marine sediments corresponding to late MIS3 to the Holocene in the radiocarbon dated core GeoB7926, retrieved off Mauritania (21°N) were analysed to reconstruct productivity in surface waters and its linkage to deep waters during the last 35 ka BP. High latitude cold events and changes in atmospheric and oceanographic dynamics influenced upwelling intensity over this time period. Subsequently, this caused changes in primary productivity off this low-latitude coastal upwelling locality. The benthic foraminiferal fauna displays four main community shifts corresponding to fundamental climatic events, first of all during late MIS3 (35-28 ka BP), secondly from 28 to 19 ka BP (including Heinrich event 2 and the LGM), thirdly within Heinrich event 1, the Bølling Allerød and the Younger Dryas (18-11.5 ka BP) and finally during the Holocene (11.5-0 ka BP). In particular, strong pelagic-benthic coupling is apparent in MIS 3, as demonstrated by increased primary productivity, indicated by moderate DAR and the dominance of benthic foraminiferal species which prefer fresh phytodetritus. A decline in upwelling intensity and nutrient availability follows, which resulted in a proportionately larger amount of older, degraded matter, provoking a shift in the benthic foraminifera fauna composition. This rapid response of the benthic environment continues with a progressive increase in upwelling intensity due to sea level and oceanographic changes and according high surface production during the LGM. During Heinrich event 1 and the Younger Dryas, extreme levels of primary production actually hindered benthic environment through the development of low oxygen conditions. After this period, a final change in benthic foraminiferal community composition occurs which indicates a return to more oxygenated conditions during the Holocene.