Ranakinestatin-PPF from the Skin Secretion of the Fukien Gold-Striped Pond Frog, Pelophylax plancyi fukienensis: A Prototype of a Novel Class of Bradykinin B2 Receptor Antagonist Peptide from Ranid Frogs

The defensive skin secretions of many amphibians are a rich source of bradykinins and bradykinin-related peptides (BRPs). Members of this peptide group are also common components of reptile and arthropod venoms due to their multiple biological functions that include induction of pain, effects on many smooth muscle types, and lowering systemic blood pressure. While most BRPs are bradykinin receptor agonists, some have curiously been found to be exquisite antagonists, such as the maximakinin gene-related peptide, kinestatin—a specific bradykinin B₂-receptor antagonist from the skin of the giant fire-bellied toad, Bombina maxima. Here, we describe the identification, structural and functional characterization of a heptadecapeptide (DYTIRTRLHQGLSRKIV), named ranakinestatin-PPF, from the skin of the Chinese ranid frog, Pelophylax plancyi fukienensis, representing a prototype of a novel class of bradykinin B₂-receptor specific antagonist. Using a preconstricted preparation of rat tail arterial smooth muscle, a single dose of 10⁻⁶ M of the peptide effectively inhibited the dose-dependent relaxation effect of bradykinin between 10⁻¹¹ M and 10⁻⁵ M and subsequently, this effect was pharmacologically-characterized using specific bradykinin B₁- (desArg-HOE140) and B₂-receptor (HOE140) antagonists; the data from which demonstrated that the antagonism of the novel peptide was mediated through B₂-receptors. Ranakinestatin—PPF—thus represents a prototype of an amphibian skin peptide family that functions as a bradykinin B₂-receptor antagonist herein demonstrated using mammalian vascular smooth muscle.

Abordagens didáticas dos conteúdos de Física e Química dos 8º e 10º anos na escola EB 2,3/s Dr. João de Brito Camacho em Almodôvar

Este relatório foi elaborado no âmbito do Mestrado em Ensino de Física e Química para o 3º ciclo do Ensino Básico e Secundário, e refere-se à Unidade Curricular Prática de Ensino Supervisionada (PES), iniciada em setembro de 2011, na Escola E B 2,3 Dr. João de Brito Camacho em Almodôvar. A disciplina de PES decorreu sob orientação dos seguintes elementos: Orientadora Científica da Componente de Química (Professora Doutora Maria de Lurdes Cristiano), Orientadora Científica da Componente da Física (Professor Doutor Rui Guerra) e Orientadora Cooperante (Dr.ª Raquel Forca). Contempla o desenvolvimento de diferentes atividades letivas, nas Componentes de Química e de Física, aplicadas nas turmas do 8º e do 10º ano, este do curso Científico – Humanístico de Ciências e Tecnologias. A componente de Química foi lecionada de setembro de 2011 a janeiro de 2012, a componente de Física foi lecionada de fevereiro de 2012 a julho de 2012. A prática de ensino supervisionada, contou com um total de vinte e três aulas, catorze da componente de Química e nove da componente de Física. Durante o ano letivo foram realizadas diversas atividades/projetos, nomeadamente uma visita de estudo aos “Dias Abertos” do Instituto Superior Técnico, onde os alunos para além de participarem em diversos workshops, puderam ainda assistir a diversas palestras sobre temas relacionados com a Física. O estagiário participou nas atividades do Plano Anual, dinamizando o projeto do Laboratório de Instrumentação e Física Experimental (LIP), designado por Radiação e Ambiente onde os alunos realizaram tarefas de investigação sobre os efeitos da radiação. Participou também no projeto financiado pela Fundação Calouste Gulbenkian “Podíamos ler mais”, que envolveu a leitura de obras de divulgação científica e contou com um contato via skype com autores como David Bodanis e Michaell Guillian. A entrevista a estes autores foi realizada no “II Encontro aqui há ciência, arte e palavras” que contou ainda com palestras de divulgação científica por parte dos orientadores deste estágio e pelo Professor Doutor Paulo Crawford do departamento de Física da Faculdade de Ciências da Universidade de Lisboa. Este projeto foi convidado pelo Plano Nacional de Leitura a representar o mesmo na Futurália 2012. Os alunos dinamizaram um workshop intitulado “Livros sem resistência” onde apresentaram as experiências que leram nas obras inerentes a este projeto. O Relatório de Estágio compreende seis capítulos, referências bibliográficas e apêndices. No capítulo I é feita uma introdução onde são apresentados os objetivos do trabalho, as unidades de Física e de Química focadas e a metodologia seguida. No capítulo II é efetuado o enquadramento geral, do qual faz parte uma descrição das condições de trabalho, da turma, alvo da prática de ensino supervisionada e das disciplinas / turmas da responsabilidade da Orientadora Cooperante. O capítulo III (Química – 8º e 10º ano) e o capítulo IV (Física – 8º e 10ºano) contêm a análise da bibliografia oficial associada, as planificações, as metodologias, os instrumentos de avaliação e as atividades extracurriculares realizadas. No capítulo V o mestrando dá a conhecer os projetos que foram realizados, presentes no Plano Anual de Atividades. O capítulo VI e último, proporciona uma análise reflexiva de todo o trabalho desenvolvido, associada a sugestões futuras, eventualmente mais eficazes para a aprendizagem da Física e da Química, pelos alunos.

(Tables 1, 2) Permafrost borehole characteristics in the Nordic Area during the IPY 2007-2009

This paper provides a snapshot of the permafrost thermal state in the Nordic area obtained during the International Polar Year (IPY) 2007-2009. Several intensive research campaigns were undertaken within a variety of projects in the Nordic countries to obtain this snapshot. We demonstrate for Scandinavia that both lowland permafrost in palsas and peat plateaus, and large areas of permafrost in the mountains are at temperatures close to 0°C, which makes them sensitive to climatic changes. In Svalbard and northeast Greenland, and also in the highest parts of the mountains in the rest of the Nordic area, the permafrost is somewhat colder, but still only a few degrees below the freezing point. The observations presented from the network of boreholes, more than half of which were established during the IPY, provide an important baseline to assess how future predicted climatic changes may affect the permafrost thermal state in the Nordic area. Time series of active-layer thickness and permafrost temperature conditions in the Nordic area, which are generally only 10 years in length, show generally increasing active-layer depths and rising permafrost temperatures.

Order and disorder in the structures of two crystal polymorphs of the adduct bis(quinolinium-2-carboxylate) DL-malic acid

The structures of two polymorphs of the anhydrous cocrystal adduct of bis(quinolinium-2-carboxylate) DL-malic acid, one triclinic the other monoclinic and disordered, have been determined at 200 K. Crystals of the triclinic polymorph 1 have space group P-1, with Z = 1 in a cell with dimensions a = 4.4854(4), b = 9.8914(7), c = 12.4670(8)Å, α = 79.671(5), β = 83.094(6), γ = 88.745(6)deg. Crystals of the monoclinic polymorph 2 have space group P21/c, with Z = 2 in a cell with dimensions a = 13.3640(4), b = 4.4237(12), c = 18.4182(5)Å, β = 100.782(3)deg. Both structures comprise centrosymmetric cyclic hydrogen-bonded quinolinic acid zwitterion dimers [graph set R2/2(10)] and 50% disordered malic acid molecules which lie across crystallographic inversion centres. However, the oxygen atoms of the malic acid carboxylic groups in 2 are 50% rotationally disordered whereas in 1 these are ordered. There are similar primary malic acid carboxyl O-H...quinaldic acid hydrogen-bonding chain interactions in each polymorph, extended into two-dimensional structures but in l this involves centrosymmetric cyclic head-to-head malic acid hydroxyl-carboxyl O-H...O interactions [graph set R2/2(10)] whereas in 2 the links are through single hydroxy-carboxyl hydrogen bonds.

Ecionines A and B, two new cytotoxic pyridoacridine alkaloids from the Australian marine sponge, Ecionemia geodides

Chemical investigations of the Australian marine sponge Ecionemia geodides resulted in the isolation of two new pyridoacridine alkaloids, ecionines A (1) and B (2), along with the previously isolated marine natural products, biemnadin (3) and meridine (4). Compounds 1 and 2 both contain an imine moiety, which is rare for the pyridoacridine structure class. The chemical structures of 1 and 2 were determined by extensive 1D and 2D NMR and MS data analyses. All compounds were tested against a panel of human bladder cancer cell lines, the increasingly metastatic TSU-Pr1 series (TSU-Pr1, TSU-Pr1-B1 and TSU-Pr1- B2) and the superficial bladder cancer cell line 5637. Ecionine A (1) displayed cytotoxicity against all cell lines, with IC50 values ranging from 3 to 7 mM. This is the first report of chemistry from the sponge genus Ecionemia.

Structure Of A Thionucleoside - 5'-Deoxy-5',6-Epithio-5,6-Dihydro-2',3'-Ortho-Isopropylidene-3-Methyluridine

C13HlsN205 S, M r = 314.35, orthorhombic, P212121 with a = 39.526 (4), b = 6.607 (2), c = 5.661 (2) A, Z = 4, V = 1478.36 A 3, D c = 1.412 Mg m -3, Cu Ka radiation. Final R = 0.073 for 1154 observed counter reflections. The sulphur atom is in a pseudo-equatorial position with respect to the dihydrouracil ring. The sugar pucker is predominantly O(l')-exo unlike the C(3')-exo,C(4')-endo observed for 2',3' O-isopropylideneuridine (ISPU). The fivemembered dioxolane ring has C(7) displaced by 0.497 (7)A from the best plane through atoms 0(2'), C(2'), C(3'), 0(3'), in contrast to ISPU where 0(3') shows the maximum deviation.

Conformational studies of the triphenylphosphazenyl side chain in cyclophosphazenes. II. Crystal and molecular structure of 2,4,4,6,6,8,8-heptachloro-2-triphenylphosphazenylcyclotetra(phosphazene), N4P4Cl7(NPPh3)

Abstract is not available.

Ratios of T-cell immune-effectors with tumour associated macrophages and PD-1/PD-L1 axis immune-checkpoint molecules, as prognosticators in diffuse large B cell lymphoma: A population-based study

Background Risk-stratification of diffuse large B-cell lymphoma (DLBCL) requires identification of patients with disease that is not cured despite initial R-CHOP. Although the prognostic importance of the tumour microenvironment (TME) is established, the optimal strategy to quantify it is unknown. Methods The relationship between immune-effector and inhibitory (checkpoint) genes was assessed by NanoString™ in 252 paraffin-embedded DLBCL tissues. A model to quantify net anti-tumoural immunity as an outcome predictor was tested in 158 R-CHOP treated patients, and validated in tissue/blood from two independent R-CHOP treated cohorts of 233 and 140 patients respectively. Findings T and NK-cell immune-effector molecule expression correlated with tumour associated macrophage and PD-1/PD-L1 axis markers consistent with malignant B-cells triggering a dynamic checkpoint response to adapt to and evade immune-surveillance. A tree-based survival model was performed to test if immune-effector to checkpoint ratios were prognostic. The CD4*CD8:(CD163/CD68)*PD-L1 ratio was better able to stratify overall survival than any single or combination of immune markers, distinguishing groups with disparate 4-year survivals (92% versus 47%). The immune ratio was independent of and added to the revised international prognostic index (R-IPI) and cell-of-origin (COO). Tissue findings were validated in 233 DLBCL R-CHOP treated patients. Furthermore, within the blood of 140 R-CHOP treated patients immune-effector:checkpoint ratios were associated with differential interim-PET/CT+ve/-ve expression.

Anaerobic DNA cleavage activity in red light and photocytotoxicity of (pyridine-2-thiol)cobalt(III) complexes of phenanthroline bases

Cobalt(III) complexes [Co(pnt)(B)(2)](NO3)(2) (1-3) of pyridine-2-thiol (pnt) and phenanthroline bases (B), viz. 1,10-phenanthroline (phen in 1), dipyrido[3,2-d: 2',3'-f]quinoxaline (dpq in 2) and dipyrido[3,2-a:2',3'-c] phenazine (dppz in 3), have been prepared, characterized and their photo-induced anaerobic DNA cleavage activity studied. The crystal structure of 1a as mixed ClO4- and PF6- salt of 1 shows a (CoN5S)-N-III coordination geometry in which the pnt and phen showed N,S- and N,N-donor binding modes, respectively. The complexes exhibit Co(III)/Co(II) redox couple near -0.3 V (vs. SCE) in 20% DMF-Tris-HCl buffer having 0.1 M TBAP. The complexes show binding propensity to calf thymus DNA giving K-b values within 2.2 x 10(4)-7.3 x 10(5) M-1. Thermal melting and viscosity data suggest DNA surface and/or groove binding of the complexes. The complexes show significant anaerobic DNA cleavage activity in red light under argon atmosphere possibly involving sulfide anion radical or thiyl radical species. The DNA cleavage reaction under aerobic medium in red light is found to involve both singlet oxygen and hydroxyl radical pathways. The dppz complex 3 shows non-specific BSA and lysozyme protein cleavage activity in UV-A light of 365 nm via both hydroxyl and singlet oxygen pathways. The dppz complex 3 exhibits photocytotoxicity in HeLa cervical cancer cells giving IC50 values of 767 nM and 19.38 mu M in UV-A light of 365 nm and in the dark, respectively. A significant reduction of the dark toxicity of the dppz base (IC50 = 8.34 mu M in dark) is observed on binding to the cobalt(III) center.

Effective action and adiabatic expansions for the 1-D and 2-D hubbard models at half-filling

We analyze here the occurrence of antiferromagnetic (AFM) correlations in the half-filled Hubbard model in one and two space dimensions using a natural fermionic representation of the model and a newly proposed way of implementing the half-filling constraint. We find that our way of implementing the constraint is capable of enforcing it exactly already at the lowest levels of approximation. We discuss how to develop a systematic adiabatic expansion for the model and how Berry's phase contributions arise quite naturally from the adiabatic expansion. At low temperatures and in the continuum limit the model gets mapped onto an O(3) nonlinear sigma model (NLsigma). A topological, Wess-Zumino term is present in the effective action of the ID NLsigma as expected, while no topological terms are present in 2D. Some specific difficulties that arise in connection with the implementation of an adiabatic expansion scheme within a thermodynamic context are also discussed, and we hint at possible solutions.

冬小麦抗寒性和光合作用对增强UV-B辐射与温度交互作用的响应

人类活动产生的氯氟烃化合物破坏了大气臭氧层，导致了到达地球表面的UV-B辐射大幅度增加。UV-B辐射增强可以影响到植物的生长、形态与发育等各个方面，因此有关增强UV-B辐射对植物的影响，及其与许多环境因子复合作用的研究都已经广泛开展。但是增强UV-B辐射与温度，特别是与低温的相互作用的研究报道很少。在北半球的晚秋至早春这段时期里，一些越冬生长的植物将面临着UV-B辐射增强和低温的双重胁迫，因此，迫切需要进行UV-B辐射和低温生长环境下植物的响应及其机制的研究。 以人工气候生长室中生长的冬小麦(Triticum aestivum)幼苗为试验材料，研究了低剂量（4.2 kJ m-2 d-1 UV-BBE，LUVB）和较高剂量（7.0 kJ m-2 d-1 UV-BBE，HUVB）UV-B辐射处理对20/16℃条件下幼苗抗寒力的交叉适应性及其抗氧化系统的反应;同时还研究了在两种生长温度（25/20℃和10/5℃）条件下，低剂量（4.2 kJ m-2 d-1 UV-BBE，LUVB）和超高剂量（10.3 kJ m-2 d-1 UV-BBE，SHUVB）UV-B辐射处理幼苗的生长速率、光合与荧光参数、叶黄素循环色素、抗氧化系统、以及抗寒性和酚类物质等生理反应，以期阐明不同温度条件下生长的冬小麦对UV-B辐射的生长、光合作用以及抗寒性响应与适应机制。主要结果如下： 1.在LUVB辐射处理下，在20/16℃和25/20℃条件下生长的冬小麦幼苗LT50值都显著降低，HUVB辐射处理对在20/16℃条件下生长的幼苗LT50值也可以显著降低，而SHUVB辐射对25/20℃条件下生长的幼苗LT50值没有显著影响。但是，LUVB和SHUVB辐射处理都导致了10/5℃条件下生长的幼苗LT50值的显著增加。表明适当的UV-B辐射能增强较高温度（20/16℃或25/20℃）条件下冬小麦幼苗的抗寒力，即表现出对冷冻低温的交叉适应性，但低温（10/5℃）生长条件却削弱了UV-B辐射下冬小麦的抗寒能力。 2.在20/16℃条件下接受UV-B辐射预处理的幼苗在-6℃条件下冷冻胁迫6 h再缓慢恢复6 h后，与未进行UV-B辐射处理的对照相比，其叶片过氧化氢酶（CAT）、愈创木酚过氧化物酶（GPX）、谷胱甘肽还原酶（GR）活性，谷胱甘肽氧化还原比例（GSH/GSSG）都显著提高，而由硫代巴比妥酸反应物质（TBARS）代表的膜质过氧化程度显著低于对照。此外，UV-B辐射期间处理幼苗的H2O2含量较对照显著增加，而冷冻恢复以后却明显低于对照。表明UV-B辐射诱导的抗寒力的提高应该与冷冻恢复后植株体内抗氧化系统的上调表达有关，H2O2可能参与了UV-B辐射对低温的交叉适应的信号传导。 3.除25/20℃生长条件下的LUVB处理的小麦幼苗外，UV-B辐射显著降低幼苗的相对生长速率（RGR）、净光合速率（Pn）、光系统II最大量子产量（Fv/Fm）、光系统II实际量子产量（(F΄m−Fs)/F΄m）以及光化学淬灭（qP），但是UV-B辐射并不影响叶片胞间CO2浓度（Ci），而且冬小麦幼苗生长和光合作用的抑制被增加的UV-B辐射剂量和降低的温度加强。UV-B辐射引起的光抑制由非气孔限制所导致，而且主要与PS II光化学效率降低有关。 4.UV-B辐射显著增加了两个温度条件（20/16℃或25/20℃）下生长的冬小麦幼苗叶黄素循环过程中紫黄素（V）的合成，但抑制了V向玉米黄质（Z）的转化，从而造成了对照与LUVB辐射处理幼苗之间的叶片中脱环氧化比例（DEPS）和NPQ无显著性差异，但SHUVB辐射处理幼苗叶片中DEPS和NPQ显著降低。因此，在本试验条件下，增强UV-B辐射处理的冬小麦可能并不通过热耗散形式形成光保护机制，光抑制形成的过剩激发能的耗散可能更多地通过代谢途径来实现。 5.UV-B辐射处理提高了在25/20℃条件下幼苗的超氧化物歧化酶（SOD）、抗坏血酸过氧化物酶（APX）和GR等活性，以及抗坏血酸氧化还原比例（AsA/DHA）和GSH/GSSG;但是在10/5℃下，UV-B辐射除了导致SOD和CAT活性升高之外，对APX活性和AsA/DHA并不产生明显影响，但GPX和GSH/GSSG则显著降低。说明UV-B辐射幼苗的抗氧化系统在较高生长温度下显著地增强，而在低温10/5℃下被严重地削弱或降低，即低温阻止了代谢途径的光保护机制的正常运转。 6.多酚物质在UV-B辐射或低温10/5℃条件下都能显著地累积，且在UV-B辐射和低温复合作用下增加尤其显著，表明多酚物质在两个温度生长条件下特别是低温条件下都参与了对UV-B辐射幼苗的保护。 7.在高温条件下仅仅SHUVB处理的幼苗TBARS含量显著增加，而低温10/5℃条件下两个UV-B辐射处理都非常显著地上升，说明与高温生长条件相比较，低温加重了UV-B辐射引起的氧化胁迫，低温10/5℃条件下幼苗多酚的增加以及抗氧化系统的部分增强都没有能阻止UV-B辐射对幼苗的伤害。

养殖褐牙鲆细胞色素b 基因序列的初步研究

对养殖褐牙鲆( Paralichthys olivaceus) 的线粒体DNA Cytb 基因的部分序列进行测定,测得的目的DNA 片段的长 度为410 bp ,其A(104 bp) 、T(119 bp) 、C(117 bp) 、G(70 bp) 4 种碱基平均含量分别为25. 4 %、29. 0 %、28. 5 %、17. 1 %。 在28 个褐牙鲆个体中共出现了3 种单倍型。白化褐牙鲆出现的第1 种和第3 种单倍型个体数分别为10 尾(占白 化褐牙鲆样本数的90. 91 %) 和1 尾(9. 09 %) ;6 尾黑化褐牙鲆均出现第1 种单倍型(100 %) ;正常褐牙鲆出现的3 种 单倍型尾数分别为7 尾(占正常褐牙鲆样本数的55. 56 %) 、2 尾(22. 22 %) 和2 尾(22. 22 %) ;测得的序列与既知序列 间在第6 bp 、第19 bp 和第402 bp 碱基处出现差异。由于褐牙鲆Cytb 基因的高度同源性,研究其白化、黑化和正常 状态时出现的序列差异,对于寻找褐牙鲆白化机理研究的分子标记意义重大。

Expressional induction of Paralichthys olivaceus cathepsin B gene in response to virus, poly I:C and lipopolysaccharide

Cathepsin B is a lysosomal cysteine protease of the papain-like enzyme family with multiple biological functions. In this study, Paralichthys olivaceus cathepsin B (PoCatB) cDNA was isolated from flounder embryonic cells (FEC) treated with UV-inactivated grass carp hemorrhage virus (GCHV) and subsequently identified as a vitally induced gene. The full length cDNA of PoCatB is 1801 bp encoding 330-amino acids. The deduced protein has high homology to all known cathepsin B proteins, containing an N-terminal signal peptide, cysteine protease active sites, the occluding loop segment and a glycosylation site, all of which are conserved in the cathepsin B family. PoCatB transcription of FEC cells could be induced by turbot (Scophthalmus maximus) rhabdovirus (SMRV), UV-inactivated SMRV, UV-inactivated GCHV, poly I:C or lipopolysaccharide (LPS), and SMRV or poly I:C was revealed to be most effective among the five inducers. In normal flounder, PoCatB mRNA was detectable in all examined tissues. Moreover, SMRV infection could result in significant upregulation of PoCatB mRNA, predominantly in spleen, head kidney, posterior kidney, intestine, gill and muscle with 18.2,10.9, 24.7,12, 31.5 and 18 fold increases at 72 h post-infection respectively. These results provided the first evidence for the transcriptional induction of cathepsin B in fish by virus and LPS, indicating existence of a novel function in viral defense. (C) 2008 Elsevier Ltd. All rights reserved.