Low voltage four-quadrant current multiplier: An improved topology for n-well CMOS process

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Low voltage four-quadrant current multiplier: an improved topology for n-well CMOS process

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

In silico network topology-based prediction of gene essentiality

The identification of genes essential for survival is important for the understanding of the minimal requirements for cellular life and for drug design. As experimental studies with the purpose of building a catalog of essential genes for a given organism are time-consuming and laborious, a computational approach which could predict gene essentiality with high accuracy would be of great value. We present here a novel computational approach, called NTPGE (Network Topology-based Prediction of Gene Essentiality), that relies on the network topology features of a gene to estimate its essentiality. The first step of NTPGE is to construct the integrated molecular network for a given organism comprising protein physical, metabolic and transcriptional regulation interactions. The second step consists in training a decision-tree-based machine-learning algorithm on known essential and non-essential genes of the organism of interest, considering as learning attributes the network topology information for each of these genes. Finally, the decision-tree classifier generated is applied to the set of genes of this organism to estimate essentiality for each gene. We applied the NTPGE approach for discovering the essential genes in Escherichia coli and then assessed its performance. (C) 2007 Elsevier B.V. All rights reserved.

Towards the prediction of essential genes by integration of network topology, cellular localization and biological process information

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

The size of excavators within a polymorphic termite species governs tunnel topology

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Structure of the posthepatic septum and its influence on visceral topology in the tegu lizard, Tupinambis merianae (Teiidae : Reptilia)

The posthepatic septum (PHS) divides the body cavity of Tupinambis merianae into two parts: the cranial one containing the lungs and liver and the caudal one containing the remaining viscera. The PHS is composed of layers of collagenous fibers and bundles of smooth muscle, neither of which show systematic orientation, as well as isolated blood vessels, lymphatic vessels, and nerves. Striated muscle of the abdominal wall does not invade the PHS. The contractions of the smooth muscles may stabilize the pleurohepatic cavity under conditions of elevated aerobic needs rather than supporting breathing on a breath-by-breath basis. Surgical removal of the PHS changes the anatomical arrangement of the viscera significantly, with stomach and intestine invading the former pleurohepatic cavity and reducing the space for the lungs, Thus, the PHS is essential to maintain the visceral topography in Tupitionibis. J. Morphol. 258:151-157, 2003. (C) 2003 Wiley-Liss. Inc.

QCD vacuum topology and glueballs

We outline a comprehensive study of spin-0 glueball properties which, in particular, keeps track of the topological gluon structure. Specifically, we implement (semi-hard) topological instanton physics as well as topological charge screening in the QCD vacuum into the operator product expansion (OPE) of the glueball correlators. A realistic instanton size distribution and the (gauge-invariant) renormalization of the instanton contributions are also implemented. Predictions for 0(++) and 0(-+) glueball properties are presented.

Cosmic topology: a brief overview

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Exploring the global topology of the universe

We review the work done by our group on cosmic topology. It ranges from early atempts to solve a famous controversy about quasars thought the multiplicity of images, to quantum cosmology in this context and an application to QED renormalization.

Search for scalar leptoquarks and T-odd quarks in the acoplanar jet topology using 2.5 fb(-1) of p(p)over-bar collision data at root s=1.96 TeV

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Search for neutral Higgs bosons in the multi-b-jet topology in 5.2 fb(-1) of p(p)over-bar collisions at root s=1.96 TeV

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Measurement of t(t)over-bar production in the tau plus jets topology using p(p)over-bar collisions root s=1.96 TeV

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Search for the Standard Model Higgs Boson in the Missing Energy and Acoplanar b-Jet Topology at root s=1.96 TeV

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Virasoro constraints and flavor-topology duality in QCD

We derive Virasoro constraints for the zero momentum part of the QCD-like partition functions in the sector of topological charge v. The constraints depend on the topological charge only through the combination N-f +betav/2 where the value of the Dyson index beta is determined by the reality type of the fermions. This duality between flavor and topology is inherited by the small-mass expansion of the partition function and all spectral sum rules of inverse powers of the eigenvalues of the Dirac operator. For the special case beta =2 but arbitrary topological charge the Virasoro constraints are solved uniquely by a generalized Kontsevich model with the potential V(X) = 1/X.