Are corridors, fragment size and forest structure important for the conservation of leaf-litter lizards in a fragmented landscape?

To investigate the implications of forest fragmentation for conservation of leaf-litter lizards the importance of fragment size, corridors and forest structure was examined in 20 forest fragments and six localities within a continuous forest in the Atlantic Plateau of Sao Paulo state, Brazil. The fragments were 2-276 ha in area and had different degrees of connectivity depending on the presence or absence of corridors. Two species of lizards were dominant, Ecpleopus gaudichaudii and Enyalius perditus. Variation in forest structure among sites was important only in explaining the abundance of E. perditus. Regardless of variation in forest structure, lizard species composition, total lizard abundance, number of species and abundance of E. perditus were sensitive to fragmentation per se but not to fragment size or corridor linkage. The inhospitable matrix surrounding fragments is probably what determines the presence and abundance of E. perditus and the high er lizard richness in continuous forests. These conditions may have prevented lizard species from recolonizing the forest fragments. Our results emphasize that the conservation of this leaf-litter fauna depends on the maintenance of large tracts of continuous forests and not on the size of fragments or on the presence of forest connections. Strategies for conservation of leaf-litter lizards in such highly fragmented Atlantic Forest landscapes should consider the enlargement of landscape connectivity between fragments and continuous forest, allowing the latter areas to act as a source of individuals for fragments.

Isolation and characterization of microsatellite loci in the Brazilian orchid Epidendrum fulgens

Epidendrum fulgens has a patchy distribution along the Atlantic Rainforest in the Brazilian coast, due to the destruction of its native habitat. Here, we report on both the development of nine new microsatellite markers isolated from this species and the characterization of their allele variability in two distant and unrelated populations. The number of alleles observed for each locus ranged from 2 to 17 with an average of 6.4 alleles per locus. These microsatellites should be valuable tools for studying the effect of habitat fragmentation on the genetic structure of E. fulgens populations.

The identity of Mygale brunnipes CL Koch 1842 (Araneae, Theraphosidae), with a redescription of the species and the description of a new genus

We describe Kochiana new genus to accommodate a small Brazilian theraphosine species described originally as Mygale brunnipes by Koch (1842), resulting in Kochiana brunnipes new combination. Recently, specimens were rediscovered in northeastern Brazilian Atlantic rainforest. A preliminary cladistic analysis using equal weights parsimony and implied weights, was carried out to examine its phylogenetic placement. Kochiana new genus was monophyletic in all trees regardless of weighting scheme or concavity used. There is preliminary evidence for Kochiana new genus monophyly and weak evidence for its placement as sister group of Plesiopelma. Kochiana new genus can be characterized by the presence of a hornshaped spermatheca in females and males with a palpal bulb having prolateral accessory keels and a well developed medial crest on the embolus apex.

Systematic revision and cladistic analysis of the Brazilian subfamily Sodreaninae (Opiliones: Gonyleptidae)

Sodreaninae is reviewed and all ten species are combined under its type genus, Sodreana Mello-Leitao, 1922, according to a cladistic analysis of morphological characters, which revealed a pectinate pattern of clades. The subfamily is endemic to the Brazilian Atlantic rainforest from Santa Catarina state to Rio de Janeiro state. Sodreana is herein considered a senior synonym of Stygnobates Mello-Leitao, 1927, Zortalia Mello-Leitao, 1936, Gertia B. Soares & H. Soares, 1946 and Annampheres H. Soares, 1979. The following new combinations are proposed: Sodreana barbiellinii (Mello-Leitao, 1927), Sodreana hatschbachi (B. Soares & H. Soares, 1946), Sodreana inscripta (Mello-Leitao, 1939), Sodreana leprevosti (B. Soares & H. Soares, 1947b), Sodreana bicalcarata (Mello-Leitao, 1936). Sodreana granulata (Mello-Leitao, 1937) is revalidated from the synonymy of Sodreana sodreana Mello-Leitao, 1922. Three new species are described: Sodreana glaucoi from Ilhabela and Boraceia, Sao Paulo state; S. curupira from Parque Nacional da Serra dos Orgaos, Rio de Janeiro state, and S. caipora from Ubatuba, Sao Paulo state. Sodreaninae species are restricted to forested areas and most occur in the southern part of the coastal Atlantic rainforest, one species occurs in interior Atlantic rainforest. The biogeographical analysis (Brooks Parsimony Analysis) resulted in a single and fully resolved most parsimonious tree with three main: components: northern (Bahia and Serra do Espinhaco), southern (Santa Catarina, Parana, Serra do Mar of Sao Paulo), and central (Espirito Santo, Serra da Bocaina, southern state of Rio de Janeiro, Serra dos Orgaos, Serra da Mantiqueira, Serra do Mar of Sao Paulo).

Chloroplast microsatellite markers for the Neotropical orchid genus Epidendrum, and cross-amplification in other Laeliinae species (Orchidaceae)

One of the most significant challenges confronting orchid researchers is the lack of specific molecular markers, mainly for species in the Neotropics. Here we report the first set of specific chloroplast microsatellite primers (cpSSR) developed for Neotropical orchids. In total, nine polymorphic cpSSR loci were isolated and characterized in four species occurring in the Brazilian Atlantic Rainforest: Epidendrum cinnabarinum, E. denticulatum, E. fulgens and E. puniceoluteum. Levels of intraspecific polymorphism were characterized using two populations for each species, with 13-20 individuals each. Allele numbers varied from two to three per locus, while the number of haplotypes ranged from three to six per species. Extensive differentiation among the taxa was detected. All markers were successfully cross-amplified in eight other different genera. These cpSSRs markers will enable novel insights into the evolution of this important Neotropical genus.

Description of two new species of Avicularia Lamarck 1818 and redescription of Avicularia diversipes (C. L. Koch 1842) (Araneae, Theraphosidae, Aviculariinae)-three possibly threatened Brazilian species

Avicularia diversipes (C. L. Koch 1842) known previously only from its original description is redescribed along with Avicularia sooretama sp. nov. and Avicularia gamba sp. nov. The three species are endemic to Brazilian Atlantic rainforest. With other Avicularia species, they share a procurved anterior eye row, slender embolus and medially folded spermathecae, whereas they have unusual characters, such as a very long and spiraled embolus (A. diversipes) and spermathecae with multilobular apex (A. sooretama sp. nov.). Furthermore, the three species lack a tibial apophysis in males and share a distinctive color pattern ontogeny that is not known in any other Avicularia species. The conservation status of the three species is discussed, especially with respect to endemism, illegal trafficking and habitat destruction. The creation of protected areas in southern State of Bahia, Brazil, is recommended, as well as the inclusion of these species in IUCN and CITES lists. Appendices with figures and species information are presented to facilitate correct specimen identification by custom officers, in order to limit illegal traffic.

Detection of hantaviruses in Brazilian rodents by SYBR-Green-based real-time RT-PCR

Current knowledge of the pathogenic hantavirus indicates that wild rodents are its primary natural reservoir. Specific primers to detect the presence of viral genomes were developed using an SYBR-Green-based real-time RT-PCR protocol. One hundred sixty-four rodents native to the Atlantic Forest biome were captured in So Paulo State, Brazil, and their tissues were tested. The presence of hantavirus RNA was detected in sixteen rodents: three specimens of Akodon montensis, three of Akodon cursor, two of Necromys lasiurus, one of Juliomys sp., one of Thaptomys nigrita, five of Oligoryzomys nigripes, and one of Oryzomys sp. This SYBR Green real-time RT-PCR method for detection of hantavirus may be useful for surveying hantaviruses in Brazil.

Evolutionary history of Dengue virus type 4: Insights into genotype phylodynamics

Dengue virus type 4 (DENV-4) circulates in tropical and subtropical countries from Asia and the Americas. Despite the importance of dengue virus distribution, little is known about the worldwide viral spread. Following a Bayesian phylogenetic approach we inferred the evolutionary history of 310 isolates sampled from 37 countries during the time period 1956-2008 and the spreading dynamics for genotypes I and II. The region (tropical rainforest biome) comprised by Malaysia-Thailand was the most likely ancestral area from which the serotype has originated and spread. Interestingly, cross-correlation analysis on demographic time series with the Asian sequences showed a statistically significant negative correlation that could be suggestive of competition among genotypes within the same serotype. (C) 2011 Elsevier B.V. All rights reserved.

Extrativismo em área de reserva da biosfera da Mata Atlântica no Rio Grande do Sul : um estudo etnobiológico em Maquiné

As frondes de Rumohra adiantiformis (G.Forest.) Ching, conhecida como “leatherleaf”, “seven-weeks-fern” ou samambaia-preta, são usadas mundialmente em arranjos florais. Na África do Sul e Brasil o comércio da espécie é baseado no extrativismo. No Brasil a coleta é realizada em áreas de Mata Atlântica, sendo que 50% da produção provém das áreas de capoeira das encostas da Serra Geral no Rio Grande do Sul (RS). Atualmente, cerca de 2.000 famílias de agricultores familiares vivem nestas áreas, tendo no extrativismo sua principal fonte de renda. No entanto no RS a coleta, o comércio e o transporte de plantas ornamentais nativas são proibidos, já que nesta zona de transição da Reserva da Biosfera da Mata Atlântica (Maquiné, RS) há grandes restrições quanto à exploração dos recursos naturais. O êxodo rural e o próprio extrativismo estabelecido a partir da década de 70, permitiram a regeneração da Floresta Ombrófila Densa. Como a espécie é característica de estágios sucessionais iniciais, a regeneração florestal está levando à diminuição dos estoques naturais. Este trabalho se propôs a identificar alternativas econômicas para diversificação da economia de famílias de extrativistas, no intuito de minimizar a tensão associada à diminuição dos estoques naturais de samambaia-preta, às dificuldades no manejo da terra e à legislação ambiental. Junto à comunidade extrativista do distrito de Solidão (Maquiné) foram coletados dados etnobiológicos sobre plantas medicinais e plantas relacionadas ao artesanato. As principais espécies identificadas foram: Bambusa tuldoides (taquareira, colmo), Clytostoma sciuripabulum (cipó-branco, caule), Cyperus prolixus (tiririca, partes aéreas), Musa acuminata (bananeira, palha), Scirpus californicus (junco, partes aéreas), Typha dominguensis (taboa, partes aéreas), sendo que Macfadyena dentata (cipó-unha-de-gato, caule), Roupala brasiliensis (carvalho-brasileiro, folhas) e Tillandsia usneoides (barbade- pau, planta inteira) são as espécies prioritárias para a avaliação da sustentabilidade do extrativismo. Os dados etnobiológicos e ecológicos mostram que é possível estabelecer o manejo sustentável da R. adiantiformis. Os maiores entraves para o estabelecimento do manejo sustentado para as espécies identificadas incluem: a) estabelecer as bases de manejo sustentável destas espécies; b) compatibilizar esta atividade extrativista com o atual Código Florestal Estadual. Plantas medicinais não parecem ser uma alternativa viável a curto prazo, enquanto o artesanato requer a adequação da atividade artesanal no meio rural com os direitos à aposentadoria rural.

Avaliação de floresta nativa do bioma Mata Atlântica: uma aplicação da metodologia de custo de reposição

O presente trabalho investigou o valor de uma floresta nativa no bioma Mata Atlântica. Para isso, utilizou-se da metodologia de custo de reposição. Além disso, buscou-se explicitar os principais fatores determinantes desse valor, bem como seus impactos. Foram formuladas quatro hipóteses de pesquisa, a saber, i) o nível de degradação da área não influencia o custo total de reposição da floresta nativa; ii) relevos mais acidentados das áreas a serem restauradas não influenciam o custo total de reposição da floresta nativa; iii) a distância da área a ser restaurada em relação ao centro urbano mais próximo não influencia o custo total de reposição da floresta nativa; e iv) a distância da área a ser restaurada em relação ao viveiro produtor de mudas não influencia o custo total de reposição da floresta nativa. Para chegar aos resultados foram realizados testes simples de diferença de médias para as variáveis qualitativas. Os resultados encontrados foram de que pode-se rejeitar a hipótese de que relevos mais acidentados das áreas a serem restauradas não influenciam o custo total de reposição da floresta nativa. No entanto, não se rejeitam as hipóteses de que a distância da área a ser restaurada em relação ao centro urbano mais próximo não influencia o custo total de reposição da floresta nativa e de que a distância da área a ser restaurada em relação ao viveiro produtor de mudas não influencia o custo total de reposição da floresta nativa. Após essa primeira aproximação, é realizada uma série de regressões, utilizando o modelo clássico de mínimos quadrados ordinários (MQO). Fez-se uma análise de sensibilidade dos resultados obtidos. O levantamento de dados foi obtido por meio da realização de uma pesquisa (questionário) a uma série de entidades do setor. Foram testadas as quatro hipóteses. De acordo com os testes realizados, pode-se dizer que a hipótese 2 sobre o impacto de um relevo mais acidentado das áreas a serem restauradas no custo total de reposição da floresta nativa se mostrou não significativa em todos os modelos. No entanto, a hipótese 1 do impacto do nível de degradação sobre o valor do projeto foi rejeitada em todos os modelos. A hipótese 3 do impacto da localização da área em relação ao centro urbano sobre o valor do projeto foi rejeitada em dois modelos e a hipótese 4 de que a distância da área a ser restaurada em relação ao viveiro produtor de mudas não influencia o custo total de reposição da floresta nativa foi rejeitada em um modelo. Chegou-se ao resultado de R$22 mil/hectare para o custo de reposição de uma floresta nativa do bioma Mata Atlântica. Esse tipo de estudo foi contextualizado no desenvolvimento feito pela economia ambiental ao longo do tempo, ressaltando suas principais características. Nas conclusões destaca-se os principais pontos do trabalho e são discutidas uma série de implicações teóricas e gerenciais do presente estudo, bem como apresentadas sugestões para novos estudos nessa área.

Fungos ectomicorrízicos em áreas de Mata Atlântica do Nordeste do Brasil

Ectomycorrhizal associations are poorly known from tropical lowlands of South America. Recent field trips to the reserve Parque Estadual das Dunas in Natal, in Rio Grande do Norte state, Brazil, revealed a undocumented community of ectomycorrhizal fungi. This type of Mycorrhizal association is frequently in the north hemisphere in temperate and boreal forests. The aim of this work is to analyze the occurrence of ectotrophic areas in atlantic rainforest. Collections along and around the trails in the reserve revealed six genera of putatively ECM fungi which belong to the basidiomycete, Amanitaceae, Boletaceae, Russulaceae, Entolomataceae, and Sclerodermataceae family which are poorly documented in Brazil. Plants belonging to Myrtaceae, Polygonaceae, Leguminosae/Caesalpinioideae, Erythroxylaceae, Malphigiaceae, Bromeliaceae, Loganiaceae, Sapotaceae e Celastraceae were found living next to the species of fungi analized. Our results suggest that the area studied is an ectotrophic environment which shows high diversity of putatively ECM fungi and some plants probably host ECM. The tropical lands are a potential focus to study reinforced by the new records of Scleroderma in Brazil and Northwest of Brazil

Dinâmica espaço-temporal em uma guilda de borboletas frugívoras no limite norte da floresta atlântica nordestina

The extent of the Brazilian Atlantic rainforest, a global biodiversity hotspot, has been reduced to less than 7% of its original range. Yet, it contains one of the richest butterfly fauna in the world. Butterflies are commonly used as environmental indicators, mostly because of their strict association with host plants, microclimate and resource availability. This research describes diversity, composition and species richness of frugivorous butterflies in a forest fragment in the Brazilian Northeast. It compares communities in different physiognomies and seasons. The climate in the study area is classified as tropical rainy, with two well defined seasons. Butterfly captures were made with 60 Van Someren-Rydon traps, randomly located within six different habitat units (10 traps per unit) that varied from very open (e.g. coconut plantation) to forest interior. Sampling was made between January and December 2008, for five days each month. I captured 12090 individuals from 32 species. The most abundant species were Taygetis laches, Opsiphanes invirae and Hamadryas februa, which accounted for 70% of all captures. Similarity analysis identified two main groups, one of species associated with open or disturbed areas and a second by species associated with shaded areas. There was a strong seasonal component in species composition, with less species and lower abundance in the dry season and more species and higher abundance in the rainy season. K-means analysis indicates that choice of habitat units overestimated faunal perceptions, suggesting less distinct units. The species Taygetis virgilia, Hamadryas chloe, Callicore pygas e Morpho achilles were associated with less disturbed habitats, while Yphthimoides sp, Historis odius, H. acheronta, Hamadryas feronia e Siderone marthesia likey indicate open or disturbed habitats. This research brings important information for conservation of frugivorous butterflies, and will serve as baseline for future projects in environmental monitoring

Análise dos remanescentes de mata atlântica do Estado do Rio Grande do Norte : uma perspectiva em alta resolução

The habitat loss and fragmentation are considered the main threats to the biodiversity. These threats operate at the landscape level, which drives the need to manage entire landscapes, not just its components. Although systematic monitoring of the Atlantic Forest biome has been ongoing since the late eighties, current data on forest fragmentation for the sub-region of Pernambuco are practically nonexistent. This study aimed to map out, with high spatial resolution, the remnants of Atlantic forest in Rio Grande do Norte, and conduct a landscape level analysis. The results show that the landscape is highly fragmented, where about 13.6% to 17% of biome remains. Most of the fragments is less than 10 ha, while a few fragments have area larger than 100 ha. Although the high degree of fragmentation, the average distance between fragments found was small (128 m), this estimate is lower than has been observed for the biome (1440m). There is evidence that abrupt changes in the quantification of landscape structure can occur when one observes the fragmentation at high spatial resolution. The results presented here can be used in management actions, in order to make the scenario more conducive to maintaining biodiversity.

Anurans of the sandy coastal plains of the Lagamar Paulista, state of São Paulo, Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)