Pharmacogenetics of MicroRNAs and MicroRNAs Biogenesis Machinery in Pediatric Acute Lymphoblastic Leukemia

Despite the clinical success of acute lymphoblastic leukemia (ALL) therapy, toxicity is frequent. Therefore, it would be useful to identify predictors of adverse effects. In the last years, several studies have investigated the relationship between genetic variation and treatment-related toxicity. However, most of these studies are focused in coding regions. Nowadays, it is known that regions that do not codify proteins, such as microRNAs (miRNAs), may have an important regulatory function. MiRNAs can regulate the expression of genes affecting drug response. In fact, the expression of some of those miRNAs has been associated with drug response. Genetic variations affecting miRNAs can modify their function, which may lead to drug sensitivity. The aim of this study was to detect new toxicity markers in pediatric B-ALL, studying miRNA-related polymorphisms, which can affect miRNA levels and function. We analyzed 118 SNPs in pre-miRNAs and miRNA processing genes in association with toxicity in 152 pediatric B-ALL patients all treated with the same protocol (LAL/SHOP). Among the results found, we detected for the first time an association between rs639174 in DROSHA and vomits that remained statistically significant after FDR correction. DROSHA had been associated with alterations in miRNAs expression, which could affect genes involved in drug transport. This suggests that miRNA-related SNPs could be a useful tool for toxicity prediction in pediatric B-ALL.

Factors influencing colour production from the sugar medium used for the rapid approximation of bacterial counts in fishery products

Results of the studies carried out to elucidate the factors influencing colour production from the sugar medium used for the rapid approximation of bacterial counts in fishery products are reported. The effect of particle size, trace elements, salt soluble protein and non-protein fractions, rate of multiplication of bacteria, in the medium, surface bacteria and the rate of colour production by individual strains of bacteria were studied. It is observed that the best results are obtained when a sea-water homogenate is used.

Growth performance of Chlorella ellipsoidea as biomicrocapsule using supernatant of digested sugar mill waste effluent

Biomicrocapsules mean microscopic living organisms which carry important nutrients, very essential for the growth and development of aquatic organisms as well as other animals. Among these biomicrocapsules, Chlorella ellipsoidea, an important green microalga (Chlorophyceae) which contains 40-45% crude protein, 12-16% crude lipid, 14-15% minerals, colour pigments, vitamins and carotene. The microalga, C. ellipsoidea was cultured in four different dilutions of supernatant of digested sugar mill effluent (DSME) i.e. 25, 50, 75 and 100% DSME and Bold basal medium (BBM) as control in laboratory condition. Maximum cell growth and chlorophyll a content of C. ellipsoidea were obtained on l0th day of culture in supernatant of 50% diluted DSME followed by those of this biomicrocapsule grown in BBM, and 75, 25 and 100% DSME at stationary phase. Cell number had highly (p<0.01) direct correlation with chlorophyll a (r = 0.889) of C. ellipsoidea, and optical density (r = 0.926) of media. Chlorophyll a was also highly (p<0.01) and directly correlated with optical density (r= 0.877) of media. The specific growth rates (µ/day) of cell and chlorophyll a of C. ellipsoidea grown in supernatant of 50% DSME were significantly (p<0.01) varied from those of C. ellipsoidea cultured in BBM followed by other DSME. Total biomass of C. ellipsoidea cultured in supernatant of 50% DSME was found significantly (p<0.01) higher than that of this microalga cultured in BBM, and supernatant of 25, 75 and 100% DSME. Similar trend was also observed in the case of optical density. The physico-chemical properties of media were varied with the growth of cell of this microalga. It was recorded that cell number, chlorophyll a of biomicrocapsule, and optical density of media were highly (p<0.01) and directly correlated with pH, hardness and alkalinity, and inversely correlated with nitrate-N. Crude protein and crude lipid of C. ellipsoidea grown in supernatant of 50% DSME were significantly (p<0.01) higher than those of C. ellipsoidea cultured in other DSME and BBM. Due to best growth performance exhibited by this microalga grown in supernatant of 50% DSME, it may be used to grow in supernatant of 50% DSME to get more essential nutrients than that cultured in supernatant of other DSME media.

Effect of sugar type on the survival of frozen-thawed rhesus monkey (Macaca mulatta) sperm

Sperm-freezing extenders supplemented with sugar or a combination of different sugars are widely used for the cryopreservation of nonhuman primate spermatozoa. Understanding which sugar or combination of sugars offers the highest level of cryoprotection w

Rubisco small subunit, chlorophyll a/b-binding protein and sucrose : fructan-6-fructosyl transferase gene expression and sugar status in single barley leaf cells in situ. Cell type specificity and induction by light

Chungui Lu, Olga A. Koroleva, John F. Farrar, Joe Gallagher, Chris J. Pollock, and A. Deri Tomos (2002). Rubisco small subunit, chlorophyll a/b-binding protein and sucrose : fructan-6-fructosyl transferase gene expression and sugar status in single barley leaf cells in situ. Cell type specificity and induction by light. Plant Physiology, 130 (3) pp.1335-1348 Sponsorship: BBSRC RAE2008

Sugar matrices in stabilization of bioactives by dehydration

Development of functional foods with bioactive components requires component stability in foods and ingredients. Stabilization of sensitive bioactive components can be achieved by entrapment or encapsulation of these components in solid food matrices. Lactose or trehalose was used as the structure-forming material for the entrapment of hydrophilic ascorbic acid and thiamine hydrochloride or the encapsulation of oil particles containing hydrophobic α-tocopherol. In the delivery of hydrophobic components, milk protein isolate, soy protein isolate, or whey protein isolate were used as emulsifiers and, in some cases, applied in excess amount to form matrices together with sugars. Dehydrated amorphous structures with bioactives were produced by freezing and freeze-drying. Experimental results indicated that: (i) lactose and trehalose showed similar water sorption and glass transition but very different crystallization behavior as pure sugars; (ii) the glass transition of sugar-based systems was slightly affected by the presence of other components in anhydrous systems but followed closely that of sugar after water plasticization; (iii) sugar crystallization in mixture systems was composition-dependent; (iv) the stability of bioactives was better retained in the amorphous matrices, although small losses of stability were observed for hydrophilic components above glass transition and for hydrophobic components as a function of water activity; (v) sugar crystallization caused significant loss of hydrophilic bioactives as a result of the exclusion from the continuous crystalline phase; (vi) loss of hydrophobic bioactives upon sugar crystallization was a result of dramatic change of emulsion properties and the exclusion of oil particles from the protecting structure; (vii) the double layers at the hydrophilic-hydrophobic interfaces improved the stability of hydrophobic bioactives in dehydrated systems. The present study provides information on the physical and chemical stability of sugar-based dehydrated delivery systems, which could be helpful in designing foods and ingredients containing bioactive components with improved storage stability.

Computational model for prediction of particle degradation during dilute phase pneumatic conveying: the use of a laboratory scale degradation tester for the determination of degradation propensity

The overall objective of this work is to develop a computational model of particle degradation during dilute-phasepneumatic conveying. A key feature of such a model is the prediction of particle breakage due to particle–wall collisions in pipeline bends. This paper presents a method for calculating particle impact degradation propensity under a range of particle velocities and particle sizes. It is based on interpolation on impact data obtained in a new laboratory-scale degradation tester. The method is tested and validated against experimental results for degradation at 90± impact angle of a full-size distribution sample of granulated sugar. In a subsequent work, the calculation of degradation propensity is coupled with a ow model of the solids and gas phases in the pipeline.