The biological sense of smell: olfactory search behavior and a metabolic view for olfactory perception

Part I of the thesis describes the olfactory searching and scanning behaviors of rats in a wind tunnel, and a detailed movement analysis of terrestrial arthropod olfactory scanning behavior. Olfactory scanning behaviors in rats may be a behavioral correlate to hippocampal place cell activity.

Part II focuses on the organization of olfactory perception, what it suggests about a natural order for chemicals in the environment, and what this in tum suggests about the organization of the olfactory system. A model of odor quality space (analogous to the "color wheel") is presented. This model defines relationships between odor qualities perceived by human subjects based on a quantitative similarity measure. Compounds containing Carbon, Nitrogen, or Sulfur elicit odors that are contiguous in this odor representation, which thus allows one to predict the broad class of odor qualities a compound is likely to elicit. Based on these findings, a natural organization for olfactory stimuli is hypothesized: the order provided by the metabolic process. This hypothesis is tested by comparing compounds that are structurally similar, perceptually similar, and metabolically similar in a psychophysical cross-adaptation paradigm. Metabolically similar compounds consistently evoked shifts in odor quality and intensity under cross-adaptation, while compounds that were structurally similar or perceptually similar did not. This suggests that the olfactory system may process metabolically similar compounds using the same neural pathways, and that metabolic similarity may be the fundamental metric about which olfactory processing is organized. In other words, the olfactory system may be organized around a biological basis.

The idea of a biological basis for olfactory perception represents a shift in how olfaction is understood. The biological view has predictive power while the current chemical view does not, and the biological view provides explanations for some of the most basic questions in olfaction, that are unanswered in the chemical view. Existing data do not disprove a biological view, and are consistent with basic hypotheses that arise from this viewpoint.

Community sense and response systems

The proliferation of smartphones and other internet-enabled, sensor-equipped consumer devices enables us to sense and act upon the physical environment in unprecedented ways. This thesis considers Community Sense-and-Response (CSR) systems, a new class of web application for acting on sensory data gathered from participants' personal smart devices. The thesis describes how rare events can be reliably detected using a decentralized anomaly detection architecture that performs client-side anomaly detection and server-side event detection. After analyzing this decentralized anomaly detection approach, the thesis describes how weak but spatially structured events can be detected, despite significant noise, when the events have a sparse representation in an alternative basis. Finally, the thesis describes how the statistical models needed for client-side anomaly detection may be learned efficiently, using limited space, via coresets.

The Caltech Community Seismic Network (CSN) is a prototypical example of a CSR system that harnesses accelerometers in volunteers' smartphones and consumer electronics. Using CSN, this thesis presents the systems and algorithmic techniques to design, build and evaluate a scalable network for real-time awareness of spatial phenomena such as dangerous earthquakes.

From molecules to organs : Microscopy and multi-scale nature of development

Morphogenesis is a phenomenon of intricate balance and dynamic interplay between processes occurring at a wide range of scales (spatial, temporal and energetic). During development, a variety of physical mechanisms are employed by tissues to simultaneously pattern, move, and differentiate based on information exchange between constituent cells, perhaps more than at any other time during an organism's life. To fully understand such events, a combined theoretical and experimental framework is required to assist in deciphering the correlations at both structural and functional levels at scales that include the intracellular and tissue levels as well as organs and organ systems. Microscopy, especially diffraction-limited light microscopy, has emerged as a central tool to capture the spatio-temporal context of life processes. Imaging has the unique advantage of watching biological events as they unfold over time at single-cell resolution in the intact animal. In this work I present a range of problems in morphogenesis, each unique in its requirements for novel quantitative imaging both in terms of the technique and analysis. Understanding the molecular basis for a developmental process involves investigating how genes and their products- mRNA and proteins-function in the context of a cell. Structural information holds the key to insights into mechanisms and imaging fixed specimens paves the first step towards deciphering gene function. The work presented in this thesis starts with the demonstration that the fluorescent signal from the challenging environment of whole-mount imaging, obtained by in situ hybridization chain reaction (HCR), scales linearly with the number of copies of target mRNA to provide quantitative sub-cellular mapping of mRNA expression within intact vertebrate embryos. The work then progresses to address aspects of imaging live embryonic development in a number of species. While processes such as avian cartilage growth require high spatial resolution and lower time resolution, dynamic events during zebrafish somitogenesis require higher time resolution to capture the protein localization as the somites mature. The requirements on imaging are even more stringent in case of the embryonic zebrafish heart that beats with a frequency of ~ 2-2.5 Hz, thereby requiring very fast imaging techniques based on two-photon light sheet microscope to capture its dynamics. In each of the hitherto-mentioned cases, ranging from the level of molecules to organs, an imaging framework is developed, both in terms of technique and analysis to allow quantitative assessment of the process in vivo. Overall the work presented in this thesis combines new quantitative tools with novel microscopy for the precise understanding of processes in embryonic development.

Shén神: categoria estruturante da racionalidade médica chinesa

A Medicina chinesa divulgada no ocidente tem sido estudada de forma fragmentada entre as suas diferentes formas de expressão desenvolvidas ao longo da história do Pensamento Médico Chinês. Nesse sentido o texto destaca três possíveis vertentes desta expressão, que denomina: Medicina Clássica Chinesa (GÜ DÀI ZHÖNG YÏ), Medicina Tradicional Chinesa (ZHÖNG YÏ) e Medicina Chinesa Contemporânea (DÄNG DÀI ZHÖNG YÏ). A primeira expressa as formulações nas obras clássicas surgidas a partir do período formativo da Medicina Chinesa, na Dinastia HÀN (206 a.C. a 221 d.C.). A segunda como corpo teórico e prático de conhecimento que, se disseminou no Oriente em geral e, posteriormente, no Ocidente como uma continuidade da Medicina Clássica Chinesa (GÜ DÀI ZHÖNG YÏ). A terceira refere-se à corrente hegemônica, hoje, na República Popular da China e mais tarde nos meios ocidentais. O objetivo do trabalho é investigar como tem sido divulgada no Ocidente por diferentes autores representantes de cada uma dessas vertentes a categoria SHÉN , frequentemente traduzida no Ocidente como Mente ou Espírito. Para tal, leva-se em conta a notoriedade acadêmica, a familiaridade com o idioma chinês, os pressupostos adotados, a história pessoal de cada um desses autores, entendidas como determinantes para suas apreensões de sentidos e significados da categoria SHÉN e, consequentemente, para os sentidos que assumem sua divulgação no Ocidente. Entendendo a Medicina Chinesa como uma Racionalidade Médica, conforme definição de Madel Therezinha Luz composta de seis dimensões: cosmologia, doutrina médica, dinâmica vital, morfologia, diagnose e terapêutica, o trabalho investiga do ponto de vista teórico-conceitual, amparado na Filosofia e Antropologia Médicas como a categoria SHÉN relaciona-se a cada uma das dimensões da Racionalidade Médica Chinesa. SHÉN relaciona-se com diversas outras categorias do Pensamento Médico e Filosófico Chinês, não sendo possível conceituá-lo sem mencionar categorias, tais como DÀO, YÏN YÁNG , TIÄN (Céu), RÉN (Homem), DÌ (Terra), MING (Destino), WÜ XÍNG (Cinco Fases), SÄN BÄO (Três Tesouros), GUÏ e LING Manifesta-se de diferentes formas através de sua relação com os ZÁNG FÜ (Órgãos e Vísceras), interferindo no funcionamento orgânico-visceral, nos aspectos de personalidade, nas emoções, entendidas como uma totalidade corpo-mente-espírito no Pensamento Médico chinês. SHÉN está presente em todas as dimensões da Racionalidade Médica Chinesa, diferindo o grau de importância dado por autores representantes de cada uma das três vertentes da Medicina Chinesa. Autores representantes da Medicina Clássica Chinesa (GÜ DÀI ZHÖNG YÏ) E DA Medicina Tradicional Chinesa (ZHÖNG YÏ) tendem a valorizar sua presença em todas as dimensões. Autores representantes da Medicina Chinesa Contemporânea (DÄNG DÀI ZHÖNG YÏ) tendem a valorizar a participação de SHÉN na dimensão Diagnose. Percebe-se, portanto, que SHÉN ao participar de todas as dimensões ganha o importante papel de estruturante da Racionalidade Médica Chinesa, não podendo, portanto, ser negligenciado nos estudos da Medicina Chinesa, sob pena de comprometer a importância da Racionalidade Médica.

Fortalecendo laços: o conceito chinês de parceria estratégica aplicado às relações bilaterais sino-russa e sino-brasileira

Esta dissertação trata das relações bilaterais sino-russa e sino-brasileira a partir do conceito de parceria estratégica, tal como este aparece na formulação teórica dos chineses. Neste sentido, a análise recai sobre o pensamento político chinês e como este articula uma concepção própria sobre as relações internacionais, na qual é dada uma ênfase às relações bilaterais da China com países aos quais confere peso estratégico no rol de suas relações bilaterais. O conceito de parceria estratégica, neste trabalho, refere-se a relações bilaterais constituídas com um grau de institucionalização de meios de consulta e organismos permanentes entre os Estados, sem com isso em traduzir-se em alianças entre os dois países ou voltadas contra um terceiro Estado. Oficialmente, o termo parceria estratégica aparece na diplomacia chinesa para caracterizar as relações bilaterais da China com o Brasil e a Rússia, por exemplo, entendidas como o tipo de relacionamento mais harmonioso do país asiático com outros Estados, uma vez que a República Popular não constitui mais alianças ou relações de muita proximidade com qualquer membro do sistema internacional. Levando em conta a validade deste conceito de parceria estratégica, são analisadas as relações bilaterais sino-russa e sino-brasileira, para compreender até que ponto é válido o conceito como ferramenta explicativa.

A study of the male reproductive organs of nine species of penaeid prawns (Crustacea: Penaeinae)

This paper deals with the male reproductive organs of nine species of penaeid prawns; Penaeus penicillatus Alcock, P. merguiensis De Man, P. semisulcatus De Haan, Metapenaeus affinis (H.Milne Edwards), M. monoceros (Fabricius), M. stebbingi Nobili, Parapenaeopsis hardwickii (Miers), P. sculptilis (Heller) and P. stylifera (H. Milne Edwards). The male reproductive organs exhibited structural variations, which were more pronounced at generic level. These variations are mainly due to the type of spermatophore they possess. One species of each genus, that is, P. merguiensis, M. affinis and P. sculptilis were also studied histologically to examine the internal structure of the male reproductive organs. Spermatophores of the six species belonging to the genera Penaeus and Parapenaeopsis are also described and illustrated.

Bacterial load in pond water and different organs of a Indian major carp Cirrhinus mrigala Ham.

During the study period (August, 1993 to July,l994) the mean bacterial load in surface water was found to vary from 1.39 xl05 (July'94) to 3.llxl07CFU/ml (September'93), while that of botrom water ranged from l.Olxl06 (May'94) to 5.90xl07CFU/ml (October '93). The mean total number of bacterial load in body slime, liver and kidney was found to vary from 0.58xl03 (July'94) to 2.37xl07CFU/g (March'94),from 0.22xl03(July'94)to 9.64xl06 CFU/g (March'94) from O.l5xl03 (July'94) to 9.36xl06 CFU/g (March'94), respectively. Bacterial load in slime was significantly correlated with bacterial load in liver, bacterial load in slime was significantly correlated with bacterial load in kidney and bacterial load in liver was significantly correlated with bacterial load in kidney.