基于Vif-APOBEC3G相互作用的抗HIV-1药物研究

载脂蛋白B mRNA编辑酶催化多肽样蛋白3G(apolipoprotein B mRNA-editing enzyme catalyticpolypeptidelike3G,APOBEC3G或A3G)是人体天然抗病毒分子,可以使病毒逆转录形成的cDNA的胞嘧啶(C)脱氨为尿嘧啶(U),产生鸟嘌呤(G)→腺嘌呤(A)超突变,导致病毒转录产物突变,从而达到抑制病毒复制的作用。HIV-1的辅助蛋白Vif,可与APOBEC3G相互作用并导致其被降解,使得这一天然抗病毒机制失效,进而增强了HIV的感染力。Vif与APOBEC3G这种相互作用为抗HIV药物提供了新靶点。针对Vif-APOBEC3G相互作用的抗HIV抑制剂已经成为研究热点。本文综述了Vif和APOBEC3G的结构、二者的相互作用,以及基于这一相互作用的抗HIV-1抑制剂研究进展。

« Aulcune bonne ottorité de philosophie naturelle par quoy on peult veritablement congnoistre de quoy est faitte et composées les oeuvres d'argent vif crud des philosophes ».

Contient : « Regles sans lesquelles nul ne peut parvenir à la congnoissance du grand oeuvre » ; « Aultre traitté de la pierre des philosophes, en rime, par huitain »

A new detector for ghosted VIF signals

Under multipath conditions, video intermediate frequency (VIF) detectors may generate a local oscillator phase error and consequently produce a dispersed detected signal due to the presence of additional IF carriers. A new detector is presented which by processing the detected phase quadrature information, derives the correct phase for synchronous detection in the presence of multipath effects. This minimises dispersion and produces a detected video signal with the linear addition of amplitude scaled ghosts.

An intronic G run within HIV-1 intron 2 is critical for splicing regulation of vif mRNA

Within target T lymphocytes, human immunodeficiency virus type I (HIV-1) encounters the retroviral restriction factor APOBEC3G (apolipoprotein B mRNA-editing enzyme, catalytic polypeptide-like 3G; A3G), which is counteracted by the HIV-1 accessory protein Vif. Vif is encoded by intron-containing viral RNAs that are generated by splicing at 3' splice site (3'ss) A1 but lack splicing at 5'ss D2, which results in the retention of a large downstream intron. Hence, the extents of activation of 3'ss A1 and repression of D2, respectively, determine the levels of vif mRNA and thus the ability to evade A3G-mediated antiviral effects. The use of 3'ss A1 can be enhanced or repressed by splicing regulatory elements that control the recognition of downstream 5'ss D2. Here we show that an intronic G run (G(I2)-1) represses the use of a second 5'ss, termed D2b, that is embedded within intron 2 and, as determined by RNA deep-sequencing analysis, is normally inefficiently used. Mutations of G(I2)-1 and activation of D2b led to the generation of transcripts coding for Gp41 and Rev protein isoforms but primarily led to considerable upregulation of vif mRNA expression. We further demonstrate, however, that higher levels of Vif protein are actually detrimental to viral replication in A3G-expressing T cell lines but not in A3G-deficient cells. These observations suggest that an appropriate ratio of Vif-to-A3G protein levels is required for optimal virus replication and that part of Vif level regulation is effected by the novel G run identified here.

Peptide inhibitors of HIV-1 protease and viral infection of peripheral blood lymphocytes based on HIV-1 Vif

We recently reported that HIV-1 Vif (virion infectivity factor) inhibits HIV-1 protease in vitro and in bacteria, suggesting that it may serve as the basis for the design of new protease inhibitors and treatment for HIV-1 infection. To evaluate this possibility, we synthesized peptide derivatives from the region of Vif, which inhibits protease, and tested their activity on protease. In an assay of cleavage of virion-like particles composed of HIV-1 Gag precursor polyprotein, full-length recombinant Vif, and a peptide consisting of residues 21–65 of Vif, but not a control peptide or BSA, inhibited protease activity. Vif21–65 blocked protease at a molar ratio of two to one. We then tested this peptide and a smaller peptide, Vif41–65, for their effects on HIV-1 infection of peripheral blood lymphocytes. Both Vif peptides inhibited virus expression below the limit of detection, but control peptides had no effect. To investigate its site of action, Vif21–65 was tested for its effect on Gag cleavage by protease during HIV-1 infection. We found that commensurate with its reduction of virus expression, Vif21–65 inhibited the cleavage of the polyprotein p55 to mature p24. These results are similar to those obtained by using Ro 31–8959, a protease inhibitor in clinical use. We conclude that Vif-derived peptides inhibit protease during HIV-1 infection and may be useful for the development of new protease inhibitors.

Sur le vif : vers impressionnistes /

Edition of 321 copies printed.

Opīsanie rukopiseĭ biblīoteki Viḟanskoĭ dukhovnoĭ seminarīi. (S prilozhenīi︠a︡mi)

The supplements contain congratulatory poems and correspondence between members of the imperial family and the metropolitans Platon and Augustin.

Enfoque del Programa VIF, sede latinoamericana: análisis y propuesta de reestructuración a través del manual administrativo

Tesis de maestría -- Universidad de Costa Rica. Posgrado en Administración y Dirección de Empresas. Maestría Profesional en Administración y Dirección de Empresas con énfasis en Gerencia, 2005

Protein complementation assay as a display system for screening protein libraries in the intracellular environment

A wide range of screening strategies have been employed to isolate antibodies and other proteins with specific attributes, including binding affinity, specificity, stability and improved expression. However, there remains no high-throughput system to screen for target-binding proteins in a mammalian, intracellular environment. Such a system would allow binding reagents to be isolated against intracellular clinical targets such as cell signalling proteins associated with tumour formation (p53, ras, cyclin E), proteins associated with neurodegenerative disorders (huntingtin, betaamyloid precursor protein), and various proteins crucial to viral replication (e.g. HIV-1 proteins such as Tat, Rev and Vif-1), which are difficult to screen by phage, ribosome or cell-surface display. This study used the β-lactamase protein complementation assay (PCA) as the display and selection component of a system for screening a protein library in the cytoplasm of HEK 293T cells. The colicin E7 (ColE7) and Immunity protein 7 (Imm7) *Escherichia coli* proteins were used as model interaction partners for developing the system. These proteins drove effective β-lactamase complementation, resulting in a signal-to-noise ratio (9:1 – 13:1) comparable to that of other β-lactamase PCAs described in the literature. The model Imm7-ColE7 interaction was then used to validate protocols for library screening. Single positive cells that harboured the Imm7 and ColE7 binding partners were identified and isolated using flow cytometric cell sorting in combination with the fluorescent β-lactamase substrate, CCF2/AM. A single-cell PCR was then used to amplify the Imm7 coding sequence directly from each sorted cell. With the screening system validated, it was then used to screen a protein library based the Imm7 scaffold against a proof-of-principle target. The wild-type Imm7 sequence, as well as mutants with wild-type residues in the ColE7- binding loop were enriched from the library after a single round of selection, which is consistent with other eukaryotic screening systems such as yeast and mammalian cell-surface display. In summary, this thesis describes a new technology for screening protein libraries in a mammalian, intracellular environment. This system has the potential to complement existing screening technologies by allowing access to intracellular proteins and expanding the range of targets available to the pharmaceutical industry.

Estimating the fraction of progeny virions that must incorporate APOBEC3G for suppression of productive HIV-1 infection

The contest between the host factor APOBEC3G (A3G) and the HIV-1 protein Vif presents an attractive target of intervention. The extent to which the A3G-Vif interaction must be suppressed to tilt the balance in favor of A3G remains unknown. We employed stochastic simulations and mathematical modeling of the within-host dynamics and evolution of HIV-1 to estimate the fraction of progeny virions that must incorporate A3G to render productive infection unsustainable. Using three different approaches, we found consistently that a transition from sustained infection to suppression of productive infection occurred when the latter fraction exceeded similar to 0.8. The transition was triggered by A3G-induced hypermutations that led to premature stop codons compromising viral production and was consistent with driving the basic reproductive number, R-o, below unity. The fraction identified may serve as a quantitative guideline for strategies targeting the A3G-Vif axis. (C) 2013 Elsevier Inc. All rights reserved.

树突状细胞与 HIV-1 辅助蛋白相互作用的体外研究——细胞系模型研究价值的验证和新的研究方向的确立

树突状细胞（Dendritic cells，DCs）作为人类免疫缺陷病毒（Human Immunodeficiency Virus，HIV）感染的第一靶细胞和第一道防线， 在HIV-1感染 和传播过程当中发挥重要的功能。DC的免疫功能主要包括抗原的捕获、加工、 递呈并激活T细胞对HIV-1作出免疫反应，这些功能的发挥依赖于其自身接受刺 激有效地分化和成熟。 与其它慢病毒（lentivirus）相同，HIV-1所具有的6种辅助蛋白（Nef，Rev， Tat，Vif，Vpr和Vpu），决定着病毒自身的复制增殖和对机体的感染和致病力。 目前，HIV-1辅助蛋白对CD4+ T细胞影响的研究较为深入，是否影响和调节DC 的分化和成熟尚不够清楚，现有的文献报道很少，且相互不一致甚至矛盾。因此， 建立合适的体外研究体系和细胞模型，有针对性地进行研究DC与HIV-1之间的相 互作用，将有助于加深对HIV/AIDS致病和发病机理的理解，具有重要的生物医 学意义。 本实验选择了可被HIV-1感染的白血病细胞系THP-1为实验模型，首先评价 了THP-1作为DC前体在研究DC分化、成熟中的可用性，特别是判定DC分化成熟 和功能状态的主要细胞表面标记的动态变化和规律。进而在相同条件下分析了6 个辅助蛋白基因对THP-1的凋亡诱导作用，证实了Nef和Tat确可诱导转染细胞自 身凋亡，而Rev和Vpr可在THP-1细胞中持续表达，形成了稳定的细胞系，为进一 步研究和比较Rev、Vpr对DC的分化、成熟的影响奠定了实验基础。更重要的是， 我们发现，Vif和Vpu不能在THP-1中有效表达，其原因可能直接与限制性因子 APOBEC3G的存在有关，提示Vpu与APOBEC3G可能存在着新的相互作用——这 一线索已作为实验室新的研究方向，进一步深入的研究可能为HIV/AIDS致病、 发病机理和机体的抗病机制提供新的科学依据。

树突状细胞与HIV-1 辅助蛋白相互作用的体外研究——新的实验体系的建立与应用

树突状细胞（DC）是免疫系统中具有多种免疫功能的关键细胞，但在HIV/AIDS 患者 体内，虽有大量病毒及抗原存在，却不能有效地激发特异性免疫应答。最新的研究显示， HIV/AIDS 血源和性传染的途径虽有不同，但DC 均是早于T 细胞而最先遭受感染的“第一 靶细胞”。已知辅助蛋白（Nef、Rev、Tat、Vif、Vpr 和Vpu）是HIV-1 在宿主细胞内复制 和致病的根本因素。而哪种辅助蛋白、如何影响DC 功能，至今研究结果甚少，结论杂乱 不一。 本论文作为HIV-1 影响DC 功能研究的实验体系部分，旨在为系统比较研究6 个辅助 蛋白对DC 功能的调节和机理奠定基础。采用分子生物学和免疫学技术方法，把辅助蛋白 基因从DNA 和mRNA 水平导入目的细胞DC，在DC 前体及其分化、成熟的各个时相， 连续、动态地分析辅助蛋白对DC 特征性表面标志及免疫相关基因的表达水平、摄取和处 理抗原、激发和调控免疫应答等功能的影响，以期揭示HIV/AIDS 患者DC 功能明显异常 和失调的原因。 首先，分别将6 个辅助蛋白基因克隆到pEGFP-N2 和pCS2+表达载体，得到具有绿色 荧光蛋白融合基因的表达载体，将分别用于DNA 和mRNA 水平转染DC。再以K562 细胞 为模型建立mRNA 转染细胞的基本方法；以人外周血CD14 单核细胞为前体，建立了体外 “2＋2”快速诱导DC 的方法。最后，利用Amaxa 转染系统，从DNA 水平研究辅助蛋白对 DC 前体（单核细胞）的功能影响。发现单核细胞转染辅助蛋白与GFP 融合基因5h 后，胞 内蛋白大量表达，且能维持表达48h；其中Nef、Tat、Vpu、Rev、Vif、Vpr 表达效率分别 为35.42%、34.42%、43.42%、 17.07%、13.65%、10.29%；单核细胞转染基因后，表型 CD14、HLA-DR、CD80、CD83、CD86、DC-SIGN 没有明显的表达变化；转染Nef、Vpu、 Rev 辅助蛋白后，单核细胞有10％凋亡；Vpr 能抑制单核细胞IL-10 的分泌，Nef 能促进分 泌IL-6。 总之，通过构建辅助蛋白的表达载体，优化DC 的体外培养过程以及mRNA 转染方法， 并成功将辅助蛋白导入DC 前体，鉴定其表型和功能变化。为研究辅助蛋白影响DC 的功 能和机制建立了稳定而可行的实验系统。

APOBEC3G抗HIV-1作用机制研究进展

APOBEC3G是细胞内新的广谱抗病毒蛋白.它具有胞苷脱氨酶活性,能使病毒负链DNA产生dC→dU高发突变,造成正链DNA G→A突变,使得病毒DNA变成无功能或降解.APO-BEC3G具有广泛的生物学功能,可以限制HIV-1等病毒复制,但HIV-1病毒感染因子Vif能拮抗APOBEC3G抑制病毒活性作用.本文简要综述了APOBEC3G抑制病毒HIV-1作用机制的最新进展.

蛋白激酶C在HIV复制中的作用与药物发现

蛋白激酶C ( PKC)是一类磷脂依赖的丝氨酸/苏氨酸 蛋白激酶, PKC在中枢神经系统疾病及心血管紊乱等多种人 类疾病中都发挥了重要作用。研究发现, PKC可以通过多种 途径刺激H IV病毒的活化,并磷酸化病毒复制周期中的多 种蛋白,如P17gag、Nef、Rev和Vif等,这些蛋白的磷酸化在 病毒复制周期中起到了不可忽视的作用。了解PKC与H IV 及细胞间的复杂关系,开发抑制PKC蛋白激酶的药物从而 达到抑制H IV复制的目的,或激活PKC从而减少或消除体 内潜伏的H IV病毒库是对PKC在抗H IV研究中应用提出的 两个主要方向,对于开发新型抗H IV药物有重要意义。