Quasi-distributed strain sensor incorporating a chirped Moiré fiber Bragg grating

A quasi-distributed strain sensor with an average spatial resolution of 164 µm over a length of 25 mm and a strain sensitivity of 0.8 ± 0.01 pm/µe has been experimentally demonstrated. The sensor was formed by a chirped Moiré fiber Bragg grating written into the core of single-mode optical fiber with a 244-nm continuous-wave laser. © 2005 IEEE.

Quasi-pilot aided phase noise estimation for coherent optical OFDM systems

In this letter, a novel phase noise estimation scheme has been proposed for coherent optical orthogonal frequency division multiplexing systems, the quasi-pilot-aided method. In this method, the phases of transmitted pilot subcarriers are deliberately correlated to the phases of data subcarriers. Accounting for this correlation in the receiver allows the required number of pilots needed for a sufficient estimation and compensation of phase noise to be reduced by a factor of 2 in comparison with the traditional pilot-aided phase noise estimation method. We carried out numerical simulation of a 40 Gb/s single polarization transmission system, and the outcome of the investigation indicates that by applying quasi-pilot-aided phase estimation, only four pilot subcarriers are needed for effective phase noise compensation. © 2014 IEEE.

Non-periodic quasi-stable nonlinear optical carrier pulses with sliding chirp-free points for transmission at 40 Gbit/s rate

In this paper, we demonstrate the possibility of reaching a quasi-stable nonlinear transmission regime with carrier pulses of 12.5 ps width in multi-channel 40 Gbit/s systems. The quasi-stable pulses that are presented in this work for the first time are not dispersion-managed solitons, and are indeed supported by a large normal span average dispersion and misbalanced optical amplification, and representing a new type of nonlinear carrier.

Analytical characterization of a quasi-lossless Raman-amplified fibre transmission scheme

In this paper, we explore theoretically a novel amplifier scheme, that combines second order bidirectional pumping and fiber Bragg grating reflectors to achieve quasi-lossless transmission over long spans. The scheme is shown to significantly reduce the signal power variation over the span as compared to commonly used schemes with the same number of pump sources. It is concluded that it can be practical to analyze a simplified system of three equations, obtained by neglecting noise terms, that would allow us to better understand the physical mechanisms and to find analytical estimates for the required pump power or the power variations along the fibre span

Second order distributed Raman amplification for quasi-lossless transmission

A novel distributed Raman amplification scheme for quasi-lossless transmission is presented. The scheme is able to keep signal power variations below 3 dB in a 100 km periodic cell and 0.36 dB in 60 km.

Theory of optimal power budget in quasi-linear dispersion-managed fibre links

A theory of an optimal distribution of the gain of in-line amplifiers in dispersion-managed transmission systems is developed. As an example of the application of the general method, a design of the line with periodically imbalanced in-line amplification is proposed.

Optimal power budget in quasi-linear dispersion-managed fiber links

We develop a theory of an optimal distribution of the gain of in-line amplifiers in dispersion-managed transmission systems. As an example of the application of the general method we propose a design of the line with periodically imbalanced in-line amplification.

Toward prediction of class II mouse major histocompatibility complex peptide binding affinity:in silico bioinformatic evaluation using partial least squares, a robust multivariate statistical technique

The accurate identification of T-cell epitopes remains a principal goal of bioinformatics within immunology. As the immunogenicity of peptide epitopes is dependent on their binding to major histocompatibility complex (MHC) molecules, the prediction of binding affinity is a prerequisite to the reliable prediction of epitopes. The iterative self-consistent (ISC) partial-least-squares (PLS)-based additive method is a recently developed bioinformatic approach for predicting class II peptide−MHC binding affinity. The ISC−PLS method overcomes many of the conceptual difficulties inherent in the prediction of class II peptide−MHC affinity, such as the binding of a mixed population of peptide lengths due to the open-ended class II binding site. The method has applications in both the accurate prediction of class II epitopes and the manipulation of affinity for heteroclitic and competitor peptides. The method is applied here to six class II mouse alleles (I-Ab, I-Ad, I-Ak, I-As, I-Ed, and I-Ek) and included peptides up to 25 amino acids in length. A series of regression equations highlighting the quantitative contributions of individual amino acids at each peptide position was established. The initial model for each allele exhibited only moderate predictivity. Once the set of selected peptide subsequences had converged, the final models exhibited a satisfactory predictive power. Convergence was reached between the 4th and 17th iterations, and the leave-one-out cross-validation statistical terms - q2, SEP, and NC - ranged between 0.732 and 0.925, 0.418 and 0.816, and 1 and 6, respectively. The non-cross-validated statistical terms r2 and SEE ranged between 0.98 and 0.995 and 0.089 and 0.180, respectively. The peptides used in this study are available from the AntiJen database (http://www.jenner.ac.uk/AntiJen). The PLS method is available commercially in the SYBYL molecular modeling software package. The resulting models, which can be used for accurate T-cell epitope prediction, will be made freely available online (http://www.jenner.ac.uk/MHCPred).

Towards the in silico identification of class II restricted T-cell epitopes:a partial least squares iterative self-consistent algorithm for affinity prediction

Motivation: The immunogenicity of peptides depends on their ability to bind to MHC molecules. MHC binding affinity prediction methods can save significant amounts of experimental work. The class II MHC binding site is open at both ends, making epitope prediction difficult because of the multiple binding ability of long peptides. Results: An iterative self-consistent partial least squares (PLS)-based additive method was applied to a set of 66 pep- tides no longer than 16 amino acids, binding to DRB1*0401. A regression equation containing the quantitative contributions of the amino acids at each of the nine positions was generated. Its predictability was tested using two external test sets which gave r pred =0.593 and r pred=0.655, respectively. Furthermore, it was benchmarked using 25 known T-cell epitopes restricted by DRB1*0401 and we compared our results with four other online predictive methods. The additive method showed the best result finding 24 of the 25 T-cell epitopes. Availability: Peptides used in the study are available from http://www.jenner.ac.uk/JenPep. The PLS method is available commercially in the SYBYL molecular modelling software package. The final model for affinity prediction of peptides binding to DRB1*0401 molecule is available at http://www.jenner.ac.uk/MHCPred. Models developed for DRB1*0101 and DRB1*0701 also are available in MHC- Pred

Revealing statistical properties of quasi-CW fibre lasers in bandwidth-limited measurements

We introduce a general technique how to reveal in experiments of limited electrical bandwidth which is lower than the optical bandwidth of the optical signal under study, whether the statistical properties of the light source obey Gaussian distribution or mode correlations do exist. To do that one needs to perform measurements by decreasing the measurement bandwidth. We develop a simple model of bandwidth-limited measurements and predict universal laws how intensity probability density function and intensity auto-correlation function of ideal completely stochastic source of Gaussian statistics depend on limited measurement bandwidth and measurement noise level. Results of experimental investigation are in good agreement with model predictions. In particular, we reveal partial mode correlations in the radiation of quasi-CW Raman fibre laser.

Influence of the generated power, measurement bandwidth, and noise level on intensity statistics of a quasi-CW Raman fiber laser

In the present paper we numerically study instrumental impact on statistical properties of quasi-CW Raman fiber laser using a simple model of multimode laser radiation. Effects, that have the most influence, are limited electrical bandwidth of measurement equipment and noise. To check this influence, we developed a simple model of the multimode quasi- CW generation with exponential statistics (i.e. uncorrelated modes). We found that the area near zero intensity in probability density function (PDF) is strongly affected by both factors, for example both lead to formation of a negative wing of intensity distribution. But far wing slope of PDF is not affected by noise and, for moderate mismatch between optical and electrical bandwidth, is only slightly affected by bandwidth limitation. The generation spectrum often becomes broader at higher power in experiments, so the spectral/electrical bandwidth mismatch factor increases over the power that can lead to artificial dependence of the PDF slope over the power. It was also found that both effects influence the ACF background level: noise impact decreases it, while limited bandwidth leads to its increase. © (2014) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.

A laser induced breakdown spectroscopy quantitative analysis method based on the robust least squares support vector machine regression model

Data fluctuation in multiple measurements of Laser Induced Breakdown Spectroscopy (LIBS) greatly affects the accuracy of quantitative analysis. A new LIBS quantitative analysis method based on the Robust Least Squares Support Vector Machine (RLS-SVM) regression model is proposed. The usual way to enhance the analysis accuracy is to improve the quality and consistency of the emission signal, such as by averaging the spectral signals or spectrum standardization over a number of laser shots. The proposed method focuses more on how to enhance the robustness of the quantitative analysis regression model. The proposed RLS-SVM regression model originates from the Weighted Least Squares Support Vector Machine (WLS-SVM) but has an improved segmented weighting function and residual error calculation according to the statistical distribution of measured spectral data. Through the improved segmented weighting function, the information on the spectral data in the normal distribution will be retained in the regression model while the information on the outliers will be restrained or removed. Copper elemental concentration analysis experiments of 16 certified standard brass samples were carried out. The average value of relative standard deviation obtained from the RLS-SVM model was 3.06% and the root mean square error was 1.537%. The experimental results showed that the proposed method achieved better prediction accuracy and better modeling robustness compared with the quantitative analysis methods based on Partial Least Squares (PLS) regression, standard Support Vector Machine (SVM) and WLS-SVM. It was also demonstrated that the improved weighting function had better comprehensive performance in model robustness and convergence speed, compared with the four known weighting functions.

Spatio-temporal generation regimes in quasi-CW Raman fiber lasers

We present experimental measurements of intensity spatiotemporal dynamics in quasi-CW Raman fiber laser. Depending on the power, the laser operates in different spatio-temporal regimes varying from partial mode-locking near the generation threshold to almost stochastic radiation and a generation of short-lived pulses at high power. The transitions between the generation regimes are evident in intensity spatio-temporal dynamics. Two-dimensional auto-correlation functions provide an additional insight into temporal and spatial properties of the observed regimes.

Ginzburg-Landau turbulence in quasi-CW Raman fiber lasers

Fiber lasers operating via Raman gain or based on rare-earth-doped active fibers are widely used as sources of CW radiation. However, these lasers are only quasi-CW: their intensity fluctuates strongly on short time scales. Here the framework of the complex Ginzburg-Landau equations, which are well known as an efficient model of mode-locked fiber lasers, is applied for the description of quasi-CW fiber lasers. The vector Ginzburg-Landau model of a Raman fiber laser describes the experimentally observed turbulent-like intensity dynamics, as well as polarization rogue waves. Our results open debates about the common underlying physics of operation of very different laser types - quasi-CW lasers and passively mode-locked lasers. Fiber lasers operating via Raman gain or based on rare-earth-doped active fibers are widely used as sources of CW radiation. However, these lasers are only quasi-CW: their intensity fluctuates strongly on short time scales. Here the framework of the complex Ginzburg-Landau equations, which are well known as an efficient model of mode-locked fiber lasers, is applied for the description of quasi-CW fiber lasers. The vector Ginzburg-Landau model of a Raman fiber laser describes the experimentally observed turbulent-like intensity dynamics, as well as polarization rogue waves. Our results open debates about the common underlying physics of operation of very different laser types - quasi-CW lasers and passively mode-locked lasers.