330 resultados para Sequências


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Pós-graduação em Genética e Melhoramento Animal - FCAV

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Pós-graduação em Matemática em Rede Nacional - IBILCE

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Pós-graduação em Microbiologia Agropecuária - FCAV

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Pós-graduação em Microbiologia Agropecuária - FCAV

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Pós-graduação em Biotecnologia - IQ

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Pós-graduação em Matemática - IBILCE

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Pós-graduação em Engenharia Elétrica - FEIS

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Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

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Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

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Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

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Pós-graduação em Engenharia Mecânica - FEG

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Introduction: Tuberculosis (TB) is a granulomatous disease caused by Mycobacterium tuberculosis. The genus Mycobacteriumhas two different complexes: M. tuberculosis Complex and M. avium Complex. This is a global health epidemic and remains a major global health problem, besides, the clinical severity of TB is significantly higher in transplanted patients. The detection of these mycobacteria complexes in transplanted patients, by molecular methods, is fundamental for quick treatment of patients and can contribute for rapid and accuracy of diagnosis. Objective: To detect mycobacteria DNA of M. tuberculosis and M. avium Complexes in formalin fixed paraffin-embedded samples (FFPE) of two patients groups: non transplanted and transplanted. Materials and Methods: The study includes 40 FFPE biopsies separated in four groups: NTP – presence of epithelioid granuloma and positive ZN, non-transplanted patients – 9 samples; NTN - presence of epithelioid granuloma and negative ZN, non-transplanted patients – 10 samples; TP – positive ZN, transplanted patients – 9 samples; TN – negative ZN, transplanted patients – 7 samples. Sections were cut for DNA extraction. Samples were submitted to PCR for amplification of: a) β-actin, b) IS6110 insertion and c) IS1245 insertion. DNA evaluation was made by spectrophotometry and efficiency and PCR analysis was made by agarose gels under UV light. Results: In all samples processed, 97.1% were positive for human β-actin gene. In22.2% of NTP group were found the IS6110 insertion sequencebut the IS1245 wasn´t. In the NTN group was not found any sequence. In theTP group, 11.1% of the samples were positive for IS6110 and also 11,1% werepositive for IS1245. In the TN group, 14.3% of the samples were positive forIS6110 and for IS1245, 14.3% was also positive. Conclusion: Although factors such as DNA degradation after formalin fixation and paraffin embedding, were possible to detect DNA from the human gene ...

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Buscando identificar marcadores populacionais que indiquem supostos mecanismos de isolamento entre as populações, no presente trabalho foram realizadas análises filogenéticas e filogeográficas em populações de Hypostomus strigaticeps, com base em sequências de DNA mitocondrial do gene ATPase 8/6. Um total de 32 exemplares provenientes de 11 populações de quatro sub-bacias: rio Mogi-Guaçu (duas), rio Paranapanema (cinco), rio Tietê (três) e Rio do Peixe (um), tiveram DNA extraído e o gene ATPase 8/6 completamente amplificado (840 pares de base) e sequenciado. As sequências obtidas foram alinhadas com o programa Bioedit, as análises filogenéticas foram realizadas no programa MEGA 5.0 através do método de Neighbor-Joining, Máxima Parcimônia e Minimun-Evolution, com 1000 réplicas de boostrap. Para as análises filogeográficas as sequências foram analisadas no programa TCS. As análises filogenéticas mostraram que a espécie forma uma unidade monofilética composta por duas linhagens: “TG” com representantes das populações dos rios Tietê, Mogi-Guaçu e Rio do Peixe, e “PC” com representantes dos rios Paranapanema e reservatório de Chavantes. A divergência genética da linhagem “TG” é de 0,1% e da linhagem “PP” é de 0,2%, enquanto a divergência genética entre as duas linhagens é de cerca de 1%. Na análise filogeográfica observou-se a existência de seis haplótipos (A-H), sendo o haplótipo A considerado ancestral para as populações analisadas. Apenas os representantes da bacia do Tietê possuem o haplótipo ancestral. Os haplótipos A, B e F possuem a maior frequência (18,51%). Os resultados obtidos para uma população do Mogi-guaçu (Cachoeira de Emas), mostram que estes peixes são muito distantes das demais populações de H. strigaticeps, tanto no ponto de vista filogenético quanto no ponto de vista fitogeográfico... (Resumo completo, clicar acesso eletrônico abaixo)

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The use of multimodal neuroimaging techniques has been helpful in the investigation of epileptogenic zone in patients with refractory epilepsies. This work aims to describe an ictal event during EEG-fMRI performed simultaneously in a 39-year-old man with refractory epilepsy. The EEG data were recorded at a sampling rate of 5 kHz, using a BrainAmp (BrainProducts, München, Germany) amplifier, with 64 MR (magnetic resonance) compatible Ag/AgCl electrodes. MR images were acquired using a 3T scanner in 3 sequences of 6 minutes of echo-planar images (EPIs), with TR = 2s, being the last sequence stopped after the ictal event. The EEG was corrected for gradient and pulse artifacts using the Brain Vision Analyzer2 software (BrainProducts), and the functional images were realigned, slice-timing corrected, normalized and smoothed. The start of the ictal changes was used for the evaluation of the BOLD response in MR images, using a t-test with a minimum cluster of 5 voxels, p <0.005 (T>2.5). The patient had a partial complex seizure, as noted by neurologist. The fMRI data showed positive BOLD responses (activation) in dysplastic areas, but showed the most significant activation outside the lesion, in areas compatible with secondary spread of the epileptic focus, probably caused by motor reaction also observed during the seizure. As a conclusion, we note that the technique of EEG-fMRI can detect the epileptogenic zone in patients with refractory epilepsy, but areas of dissemination of primary epileptogenic focus may show significant activation, introducing additional difficulties to the interpretation of the results