Polishable and Renewable DNA Hybridization Biosensors

Routine applications of DNA hybridization biosensors are often restricted by the need for regenerating the single-stranded (ss) probe for subsequent reuse. This note reports on a viable alternative to prolonged thermal or chemical regeneration schemes through the mechanical polishing of oligonucleotide-bulk-modified carbon composite electrodes. The surface of these biocomposite hybridization biosensors can be renewed rapidly and reproducibly by a simple extrusion/polishing protocol. The immobilized probe retains its hybridization activity on confinement in the interior of the carbon paste matrix, with the use of fresh surfaces erasing memory effects and restoring the original target response, to allow numerous hybridization/measurement cycles. We expect that such reusable nucleic acid modified composite electrodes can be designed for a wide variety of biosensing applications.

Photoluminescence of disordered ABO3 perovskites

Intense photoluminescence in highly disordered (amorphous) BaTiO3, PbTiO3, and SrTiO3 prepared by the polymeric precursor method was observed at room temperature. The emission band maxima from the three materials are in the visible region and depend on the exciting wavelength. The origin of the photoluminescence was not exactly identified. However, the line shape indicates that confinement effects are not probable. The experimental results indicate that it could be related to the disordered perovskite structure. © 2000 American Institute of Physics.

First results for the Coulomb gauge integrals using NDIM

The Coulomb gauge has at least two advantages over other gauge choices in that bound states between quarks and studies of confinement are easier to understand in this gauge. However, perturbative calculations, namely Feynman loop integrations, are not well defined (there are the so-called energy integrals) even within the context of dimensional regularization. Leibbrandt and Williams proposed a possible cure to such a problem by splitting the space-time dimension into D = ω + ρ, i.e., introducing a specific parameter ρ to regulate the energy integrals. The aim of our work is to apply the negative dimensional integration method (NDIM) to the Coulomb gauge integrals using the recipe of split-dimension parameters and present complete results - finite and divergent parts - to the one- and two-loop level for arbitrary exponents of the propagators and dimension.

Sol-Gel Erbium-Doped Silica-Hafnia Planar and Channel Waveguides

Erbium activated SiO2 -HfO2 planar waveguides, doped with Er3+ concentrations ranging from 0.01 to 4 mol%, were prepared by sol-gel method. The films were deposited on v-SiO2 and silica-on-silicon substrates using dip-coating technique. The waveguides show high densification degree, effective intermingling of the two film components, and uniform surface morphology. The waveguide deposited on silica-on-silicon substrates shows one single propagation mode at 1.5μm, with a confinement coefficient of 0.81 and an attenuation coefficient of 0.8 dB/cm at 632.8nm. Emission in the C-telecommunication band was observed at room temperature for all the samples upon continuouswave excitation at 980 nm or 514.5 nm. The shape of the emission band corresponding to the 4I13/2 → 4I15/2 transition is found to be almost independent both on erbium content and excitation wavelength, with a FWHM between 44 and 48 nm. The 4I13/2 level decay curves presented a single-exponential profile, with a lifetime ranging between 1.1 - 6.6 ms, depending on the erbium concentration. Infrared to visible upconversion luminescence upon continuous-wave excitation at 980 nm was observed for all the samples. Channel waveguide in rib configuration was obtained by etching the active film in order to have a well confined mode at 1.5 μm.

Spinodal decomposition in pure-gauge QCD

Spinodal decomposition in a model of pure-gauge SU(2) theory that incorporates a deconfinement phase transition is investigated by means of real-time lattice simulations of the fully nonlinear Ginzburg-Landau equation. Results are compared with a Glauber dynamical evolution using Monte Carlo simulations of pure-gauge lattice QCD. © 2005 American Institute of Physics.

Ventilatory frequency of Nile tilapia subjected to different stressors

Ventilatory frequency (VF) was investigated in the fish Nile tilapia, Oreochromis niloticus, subjected to confinement, electroshock or social stressor. Fish were allowed to acclimatize to tank conditions for 10 days (1 fish/aquarium). VF baseline was determined 5 days after adjustment had been started. At the 10th day of isolation, stressor effects on VF were assessed. The stressors were imposed during 60 min: pairing with a larger resident animal (social stressor), or gentle electroshock (AC, 20 V, 15 mA, 100 Hz for 1 min every 4 min), or space restriction (confinement). VF was quantified immediately after the end of the stressor imposition. Baseline of VF was not statistically different among groups. Social stressor clearly induced VF to increase, while an increased or decreased VF can be observed for both confinement and electroshock. However, fish tend to increase their VF in response to confinement and decrease in the case of electroshock. These results suggest that VF is a sensitive behavioural indicator for distinguishing stress responses in the fish Nile tilapia among different stressors. © 2006 Elsevier GmbH. All rights reserved.

Ocorrência de infecção urinária em pacientes de um hospital universitário

Infection in hospitals is a serious problem for the Public Health System. It is responsible for the increasing number of hospital deaths, as well as the longer time patients may have to stay in hospital, raising the costs of confinement more and more. The most common hospital infection is urinary tract infections (UTI), the use of the urinary catheter being the main risk factor. The aim of this study was to evaluate the profile of UTI among hospitalized patients in a University Hospital in Brazil, from October to December 2003. Out of 271 samples of urine checked, 51 were positive, 27 of these from patients having community-acquired UTI and 24 whose infection originated in the hospital. The community-acquired UTIs were more frequent in female patients (63%). The highest incidence of infection was caused by Escherichia coli (74%), especially in patients aged from 0 to 15 (37%). The episodes of hospital-acquired infection happened, in the main, in male patients aged above 50 (68%) who were using a lasting vesical catheter; in this group of patients the infection was frequently caused by E. coli (29.1%) and Klebsiella spp. (29.1%). E. coli and Klebsiella pneumoniae exhibited strong resistance (62.5%) to trimethoprim-sulfamethoxazole, as well as to ampicillin, showing that these drugs should not be used to cure UTIs in this institution.

Rendimento dos não-componentes da carcaça de cordeiros de diferentes genótipos

Non-carcass components percentages of lambs terminated in confinement, fed with diet containing 40:60 forage:concentrate ratio were influenced by lambs' breed (Morada Nova and 1/2 Somális Brasileira 1/2 Morada Nova), except for the liver, without difference between pure and crossbred animals, with average values of 2.29% and 0.35%, respectively. Crossbred lambs had higher percentages of skin (8.96%), head plus foot (10.68%), heart (0.88%), and kidney (0.93%) than purebred lambs (7.15%, 9.69%, 0.56% and 0.35%, respectively).

Short-distance part of the interaction of D mesons and nucleons

The short-distance part of the low energy interaction of D-mesons and nucleons is investigated in the context of a quark model. The quark model is based on Coulomb gauge QCD. The model contains a confining Coulomb potential and a transverse hyperfine interaction consistent with a finite gluon propagator in the infrared. The basic mechanism for the short-distance interaction between the D-mesons and nucleons is quark interchange. Using Resonating GroupMethod techniques an effective potential for the interaction between nucleons and D mesons can be obtained and used in a Lippmann-Schwinger equation to obtain differential cross-sections and phase shifts.

The interaction of D mesons and nucleons at finite density

We present results on the the influence of changes in the masses and sizes of D mesons and nucleons on elastic DN scattering cross sections and phase shifts in a hadronic medium composed of confined quarks in nucleons. We evaluate the changes of the hadronic masses due to changes of the light constituent quarks at finite baryon density using a chiral quark model based on Coulomb gauge QCD. The model contains a confining Coulomb potential and a transverse hyperfine interaction consistent with a finite gluon propagator in the infrared. We present results for the total cross section and the s-wave phase shift at low energies for isospin I=1-for I=0 and other partial waves the results are similar.

Absence of Klein's paradox for massive spinless bosons coupled by a nonminimal vector interaction

A few properties of the nonminimal vector interaction in the Duffin-Kemmer-Petiau theory in the scalar sector are revised. In particular, it is shown that the nonminimal vector interaction has been erroneously applied to the description of elastic meson-nucleus scatterings and that the space component of the nonminimal vector interaction plays a peremptory role for the confinement of bosons whereas its time component contributes to the leakage. Scattering in a square step potential is used to show that Klein's paradox does not manifest in the case of a nonminimal vector coupling. Copyright © owned by the author(s) under the terms of the Creative Commons Attribution- NonCommercial-ShareAlike Licence.

Chiral symmetry breaking with a confining propagator and dynamically massive gluons

Chiral symmetry breaking in QCD is studied introducing a confining effective propagator, as proposed recently by Cornwall, and considering the effect of dynamically massive gluons. The effective confining propagator has the form 1/(k2 +m2)2 and we study the bifurcation equation finding limits on the parameter m below which a satisfactory fermion mass solution is generated. Since the coupling constant and gluon propagator are damped in the infrared, due to the presence of a dynamical gluon mass, the major part of the chiral breaking is only due to the confining propagator and related to the low momentum region of the gap equation. We study the asymptotic behavior of the gap equation containing this confinement effect and massive gluon exchange, and find that the symmetry breaking can be approximated by an effective four-fermion interaction generated by the confining propagator. We compute some QCD chiral parameters as a function of m, finding values compatible with the experimental data. We find a simple approximate relation between the fermion condensate and dynamical mass for a given representation as a function of the parameters appearing in the effective confining propagator. © Copyright owned by the author(s) under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike Licence.

A precautionary tale when describing species in a world of invaders: Morphology, coloration and genetics demonstrate that Lysmata rauli is not a new species endemic to Brazil but a junior synonym of the Indo-Pacific L. vittata

The objective of this study was to investigate morphological variation in traits of systematic relevance and the phylogenetic position, ecology, and reproductive biology of the shrimp Lysmata rauli Laubenheimer and Rhyne, 2010 (Caridea: Hippolytidae), described based only on a single specimen collected in Salvador, Bahia, Brazil. We analyzed a total of 89 specimens from Camamu Bay, Bahia (n = 88) and from S3o Vicente estuary, São Paulo (n = 1). Considerable morphological variation was detected in the rostral spine series, number of segments on the carpus and merus of pereiopod 2, number of spiniform setae on the ventrolateral margin of merus and on the ventral margin of propodus of pereiopods 3-5. Importantly, L rauli can be distinguished neither using morphology, nor coloration from the Indo-Pacific L. vittata (Stimpson, 1860). Furthermore, molecular phylogenetic analyses (using the 16S mt DNA fragment) did not reveal any considerable genetic dissimilarities between L rauli and L vittata. Thus, our results clearly indicate that L rauli is not a new species but a junior synonym of L vittata. The high density observed within the structures of oyster farming indicates that the invasive L vittata lives in crowds in Brazil. The studied population was composed of males, hermaphrodites, and transitional individuals (having characteristics of males and hermaphrodites). The above information suggests that L rauli is a protandric simultaneous hermaphrodite, as it has been observed in all species of Lysmata that have been investigated. Lysmata vittata has invaded the southwestern Atlantic and is present in Bahia, Rio de Janeiro and S3o Paulo, Brazil. © The Crustacean Society, 2013. Published by Brill NV, Leiden.

When small is different: The case of membranes inside tubes

Recently, classical elasticity theory for thin sheets was used to demonstrate the existence of a universal structural behavior describing the confinement of sheets inside cylindrical tubes. However, this kind of formalism was derived to describe macroscopic systems. A natural question is whether this behavior still holds at nanoscale. In this work, we have investigated through molecular dynamics simulations the structural behavior of graphene and boron nitride single layers confined into nanotubes. Our results show that the class of universality observed at macroscale is no longer observed at nanoscale. The origin of this discrepancy is addressed in terms of the relative importance of forces and energies at macro and nano scales. © 2012 Materials Research Society.

Environmental light color affects the stress response of Nile tilapia

We investigated the effects of environmental light colors (blue, yellow and white) on the stress responses (measured by changes in ventilatory frequency - VF) of Nile tilapia to confinement. After 7 days of light treatment, the VF was similar for fish in each color. On the 8th day, fish were confined for 15. min. After release, the post-confinement VF was measured six times (first period: 0, 2 and 4. min; second period: 6, 8 and 10. min). Irrespective of the light color treatment, confinement increased the VF to higher levels during the first post-confinement period than during the second one. When color was analyzed, irrespective of time, fish under white light increased their VF post-confinement, and blue light prevented this effect. We conclude that blue light is the preferred color for Nile tilapia in terms of reducing stress. This finding is in contrast to previous choice test studies that indicated that yellow is their preferred color. © 2012 Elsevier GmbH.