Evaluation of susceptibility of pear and plum varieties and rootstocks to Ca. P. pyri and Ca. P. prunorum using Real-Time PCR

Real-time PCR was used to quantify phytoplasma concentration in fifty inoculated trees from five Prunus rootstocks and in forty-eight symptomatic pear and Japanese plum trees from orchards. Seasonal fluctuation of Ca. P. prunorum in different Prunus rootstocks, over three years, showed that the highest percentage detected by nested-PCR was in the ‘Garnem’ rootstock on nearly all sampling dates. Intra-varietal differences were also observed. Phytoplasma titer could be estimated by real time PCR in some trees of the rootstocks ‘Garnem’, ‘Barrier’, ‘GF-677’ and ‘Marianna’, and ranged from 4.7x105 to 3.18x109 phytoplasmas per gram of tissue. Quantification by real-time PCR was not possible in the ‘Cadaman’ trees analyzed, probably due to a lower phytoplasma titer in this variety. Samples from infected trees from commercial plots had different phytoplasma concentration and detection percentage depending on the variety, both being lower in ‘Fortune’ and ‘606’ Japanese plum and in ‘Blanquilla’ pear trees.

Evaluation of detection methods for Virus, Viroids and Phytoplasmas affecting pear and apple

The RT-PCR technique for the detection of apple stem grooving virus (ASGV), apple stem pitting virus (ASPV), apple chlorotic leaf spot virus (ACLSV), apple mosaic virus (ApMV) and pear blister canker viroid (PBCV) was evaluated for health control of fruit plants from nurseries. The technique was evaluated in purified RNA and crude extracts and also in phloem collected in autumn and from young spring shoots. The results obtained for phytoplasma detection with ribosomal and non-ribosomal primers are also presented.

Diversity of the bacterial community in the surface soil of a pear orchard based on 16S rRNA gene analysis

A cultivation-independent approach based on polymerase chain reaction (PCR)-amplified partial small subunit rRNA genes was used to characterize bacterial populations in the surface soil of a commercial pear orchard consisting of different pear cultivars during two consecutive growing seasons. Pyrus communis L. cvs Blanquilla, Conference, and Williams are among the most widely cultivated cultivars in Europe and account for the majority of pear production in Northeastern Spain. To assess the heterogeneity of the community structure in response to environmental variables and tree phenology, bacterial populations were examined using PCR-denaturing gradient gel electrophoresis (DGGE) followed by cluster analysis of the 16S ribosomal DNA profiles by means of the unweighted pair group method with arithmetic means. Similarity analysis of the band patterns failed to identify characteristic fingerprints associated with the pear cultivars. Both environmentally and biologically based principal-component analyses showed that the microbial communities changed significantly throughout the year depending on temperature and, to a lesser extent, on tree phenology and rainfall. Prominent DGGE bands were excised and sequenced to gain insight into the identities of the predominant bacterial populations. Most DGGE band sequences were related to bacterial phyla, such as Bacteroidetes, Cyanobacteria, Acidobacteria, Proteobacteria, Nitrospirae, and Gemmatimonadetes, previously associated with typical agronomic crop environments

Comparison of lures loaded with codlemone and pear ester for capturing codling moths, Cydia pomonella, in apple and pear orchards using mating disruption

Studies were conducted in apple, Malus domestica Borkhausen and pear, Pyrus communis L. (Rosales: Rosaceae), orchards to evaluate the attractiveness of grey halobutyl septa loaded with 1 (L2) and 10 (Mega) mg of codlemone, 8E,10E-dodecadien-1-ol, 3 mg of pear ester, ethyl (E,Z)- 2,4-decadienoate (DA2313), and 3 mg of pear ester plus 3 mg of codlemone (Combo) to adult codling moth, Cydia pomonella (L.) (Lepidoptera: Tortricidae). All studies were conducted in orchards treated with pheromone mating disruption. All four lures were tested on diamond-shaped sticky traps placed in 60 plots of apple and 40 plots of pears in 2003/04, and in 62 plots of apples and 30 of pears in 2004-05. Combo lures attracted significantly more moths (males + females) than all the others in both years. Comparisons among flights showed significant differences mainly for flight 1 and 2, but not always for flight 3. Mega lures provided no significant improvement compared with L2 lures during both seasons regarding the total number of moths. Combo and DA2313 lures attracted fewer females than males during the whole season. For most sample dates, more virgin than mated females were attracted to Combo lures, except during the third flight, and the overall ratio was 60:40, although the difference was not statistically significant. We conclude that the Combo lures are better indicators of codling moth activity in pheromone treated orchards, regardless of pest population level, when compared with similar lures containing codlemone or pear ester alone.

Evaluation of a revision of the BSPcast decision support system for control of brown spot of pear

Control of brown spot of pear requires fungicide treatments of pear trees during the growing season. Scheduling fungicide sprays with the Brown spot of pear forecasting system (BSPcast) provides significantfungicide savings but does not increase the efficacy of disease control. Modifications in BSPcast wereintroduced in order to increase system performance. The changes consisted of: (1) the use of a daily infectionrisk (Rm≥0.2) instead of the 3-day cumulative risk (CR≥0.4) to guide the fungicide scheduling, and (2) theinclusion of the effect of relative humidity during interrupted wetness periods. Trials were performed during2 years in an experimental pear orchard in Spain. The modifications introduced did not result in increaseddisease control efficacy, compared with the original BSPcast system. In one year, no reduction in the numberof fungicide applications was obtained using the modified BSPcast system in comparison to the original system, but in the second year the number of treatments was reduced from 15 to 13. The original BSPcast model overestimated the daily infection risk in 6.5% of days with wetness periods with low relative humidity during the wetness interruption, and in these cases the modified version was more adequate

Etiología de enfermedades asociadas al decaimiento del peral. Mejora de técnicas de detección de fitoplasmas

El fitoplasma causante de la enfermedad del decaimiento del peral o Pear decline (PD) había sido descrito en nuestro país, pero se desconocía la incidencia real del patógeno, ya que las sintomatologías observadas se confundían a menudo con otros patógenos o con posibles desordenes fisiológicos. Se propuso realizar un estudio conducente a discernir la presencia del PD de otros agentes afines, así como determinar su incidencia y distribución por variedades y patrones en el área frutícola de Cataluña y Cuenca del Ebro. Así mismo, para un adecuado control de la enfermedad era necesario conocer cuales eran las especies de insectos vectores de la enfermedad en la zona y conocer si existía un único aislado del fitoplasma o por el contrario existía variabilidad genética del mismo. Se desconocía si la distinta expresión de síntomas observada era debida a variabilidad genética del fitoplasma o a una respuesta varietal. En el momento de iniciarse el proyecto únicamente dos especies del género Cacopsylla habían sido identificadas como vectores de la enfermedad C. pyricola y C. pyrisuga, aunque se sospechaba que C. pyri también era probablemente vector de la enfermedad, ya que era la especie más abundante en los países mediterráneos y se habían identificado individuos de esta especie portadores del fitoplasma. Por otro lado, la dificultad de diagnosticar las enfermedades producidas por fitoplasmas era también uno de los principales problemas para su control. La técnica de la PCR aunque era la más sensible, resultaba poco asequible para la aplicación rutinaria en empresas o para la certificación de material vegetal. Los principales problemas eran debidos a la complejidad del proceso de extracción del ADN, especialmente en leñosas y muy especialmente en peral, donde la presencia de inhibidores interfiere a menudo en el desarrollo de la PCR. Por estos motivos se planteó la mejora de las técnicas de detección para este fitoplasma y la puesta a punto de modificaciones que simplificaran la técnica de la PCR y permitieran su utilización de forma más rutinaria. Otro punto importante para la detección precoz de la enfermedad era conocer la distribución y concentración del fitoplasma en los distintos estadios fenológicos del árbol y en los distintos tejidos u órganos, con el fin de determinar el mejor momento para realizar la detección. Otra finalidad de este objetivo era determinar en que épocas del año podía propagarse la enfermedad a través de la multiplicación vegetativa, ya que se creía que el fitoplasma descendía a las raíces durante el invierno y por tanto las yemas tomadas durante este período estaban libres del mismo. También se planteó un estudio para determinar la correlación entre la detección del fitoplasma y la expresión de síntomas, ya que la detección del fitoplasma en plantas asintomáticas es esencial en los procesos de propagación vegetativa y de certificación del material vegetal obtenido.

Determinació de la dosi potencial de pseudotecis de l'ascomicet Pleospora allii per millorar els programes de control de l'estemfiliosi de la perera

L’objectiu principal d’aquest treball és relacionar el nivell d’estemfiliosi en plantacions comercials de perera, a caiguda de fulla, amb la DPP o dosi potencial de pseudotecis de Pleospora allii (fase sexual del patogen Stemphylium vesicarium). També es pretén determinar aspectes relacionats amb la biologia del fong P. allii, com la dinàmica de producció de pseudotecis en el temps i l’efecte de la temperatura en aquesta formació. El coneixement del DPP en plantacions de pera i la predicció del desenvolupament inicial de la malaltia poden permetre perfeccionar els programes de control de l’estemfiliosi, reduint-ne el cost i l’impacte ambiental

Dinàmica d'esporulació del fong Stemphylium vesicarium en perera i determinació de la viabilitat dels conidis en funció de paràmetres ambientals

L’objectiu del treball és per una banda determinar la dinàmica d’esporulació i emissió de conidis de Stemphylium vesicarium en finques comercials de perera, i per altra banda determinar la viabilitat de la capacitat infectiva i germinativa d’aquests conidis al llarg del temps segons diferents condicions ambientals

Contribució al coneixement del cicle biològic de la carpocapsa (Cydia pomonella (L.)) de pomes i peres a Girona: estimació de l’entrada en diapausa de la població de segona generació

Estudi de la Cydia pomonella (L.), corc de les pomes i de les peres que és una plaga molt important en tot l’àmbit estatal i del control que cal fer-ne per tal d’evitar la pèrdua total o parcial de la collita

Influència de la temperatura i humitat relativa en l’esporulació del fong “Stemphylium vesicarium” en fulles de perera

Estudi de la fase asexual del fong deuteromicet Stemphylium vesicarium causant de l’estemfilosi de la perera

Determinació de l'eficàcia de soques de Bacillus sp. en el control de Stemphylium vesicarium en assajos in vitro i ex vivo

L’estemsiliosi de la perera és una malaltia fúngica d’una gran importància econòmica a la zona del centre i sud d’Europa. És comparable al motejat de la pomera i pot arribar a assolir el 90 % de pèrdues en pressions elevades de la malaltia. S’ha comprovat que els tractaments amb fungicides presenten una eficàcia de control limitada, i que les mesures sanitàries i de control biològic generen resultats que plantegem com a una eina més a utilitzar en en la integració de mètodes de control. L’objectiu del treball és determinar l’eficàcia de control de Stemphylium vesicarium a partir de diferents soques de Bacilus subtilis en assatjos en situacions controlades

Mechanisms of antagonism of Pseudomonas fluorescens EPS62e against Erwinia amylovora, the causal agent of fire blight

Pseudomonas fluorescens EPS62e was selected during a screening procedure for its high efficacy in controlling infections by Erwinia amylovora, the causal agent of fire blight disease, on different plant materials. In field trials carried out in pear trees during bloom, EPS62e colonized flowers until the carrying capacity, providing a moderate efficacy of fire-blight control. The putative mechanisms of EPS62e antagonism against E. amylovora were studied. EPS62e did not produce antimicrobial compounds described in P. fluorescens species and only developed antagonism in King’s B medium, where it produced siderophores. Interaction experiments in culture plate wells including a membrane filter, which physically separated the cultures, confirmed that inhibition of E. amylovora requires cell-to-cell contact. The spectrum of nutrient assimilation indicated that EPS62e used significantly more or different carbon sources than the pathogen. The maximum growth rate and affinity for nutrients in immature fruit extract were higher in EPS62e than in E. amylovora, but the cell yield was similar. The fitness of EPS62e and E. amylovora was studied upon inoculation in immature pear fruit wounds and hypanthia of intact flowers under controlled-environment conditions. When inoculated separately, EPS62e grew faster in flowers, whereas E. amylovora grew faster in fruit wounds because of its rapid spread to adjacent tissues. However, in preventive inoculations of EPS62e, subsequent growth of EPS101 was significantly inhibited. It is concluded that cell-to-cell interference as well as differences in growth potential and the spectrum and efficiency of nutrient use are mechanisms of antagonism of EPS62e against E. amylovora

Evaluation of four whole-plant inoculation methods to analyze the pathogenicity of Erwinia amylovora under quarantine conditions

Four methods were tested to assess the fire-blight disease response on grafted pear plants. The leaves of the plants were inoculated with Erwinia amylovora suspensions by pricking with clamps, cutting with scissors, local infiltration, and painting a bacterial suspension onto the leaves with a paintbrush. The effects of the inoculation methods were studied in dose-time-response experiments carried out in climate chambers under quarantine conditions. A modified Gompertz model was used to analyze the disease-time relatiobbnships and provided information on the rate of infection progression (rg) and time delay to the start of symptoms (t0). The disease-pathogen-dose relationships were analyzed according to a hyperbolic saturation model in which the median effective dose (ED50) of the pathogen and maximum disease level (ymax) were determined. Localized infiltration into the leaf mesophile resulted in the early (short t0) but slow (low rg) development of infection whereas in leaves pricked with clamps disease symptoms developed late (long t0) but rapidly (high rg). Paintbrush inoculation of the plants resulted in an incubation period of medium length, a moderate rate of infection progression, and low ymax values. In leaves inoculated with scissors, fire-blight symptoms developed early (short t0) and rapidly (high rg), and with the lowest ED50 and the highest ymax

Pathogenic plant-microbe interactions. What we know and how we benefit

Plants, like humans and other animals, also get sick, exhibit disease symptoms, and die. Plant diseases are caused by environmental stress, genetic or physiological disorders and infectious agents including viroids, viruses, bacteria and fungi. Plant pathology originated from the convergence of microbiology, botany and agronomy; its ultimate goal is the control of plant disease. Microbiologists have been attracted to this field of research because of the need for identification of the agents causing infectious diseases in economically important crops. In 1878—only two years after Pasteur and Koch had shown for the first time that anthrax in animals was caused by a bacteria—Burril, in the USA, discovered that the fire blight disease of apple and pear was also caused by a bacterium (nowadays known as Erwinia amylovora). In 1898, Beijerinck concluded that tobacco mosaic was caused by a “contagium vivum fluidum” which he called a virus. In 1971, Diener proved that a potato disease named potato spindle tuber was caused by infectious RNA which he called viroid

Real-time tree-foliage surface estimation using a ground laser scanner

The optimization of most pesticide and fertilizer applications is based on overall grove conditions. In this work we measurements. Recently, Wei [9, 10] used a terrestrial propose a measurement system based on a ground laser scanner to LIDAR to measure tree height, width and volume developing estimate the volume of the trees and then extrapolate their foliage a set of experiments to evaluate the repeatability and surface in real-time. Tests with pear trees demonstrated that the accuracy of the measurements, obtaining a coefficient of relation between the volume and the foliage can be interpreted as variation of 5.4% and a relative error of 4.4% in the linear with a coefficient of correlation (R) of 0.81 and the foliar estimation of the volume but without real-time capabilities. surface can be estimated with an average error less than 5 %.