Novel antifouling and antimicrobial compound from a marine-derived fungus Ampelomyces sp.

In this study, using a bioassay-guided isolation and purification procedure, we obtained 3-chloro-2,5-dihydroxybenzyl alcohol from a marine-derived Ampelomyces species that effectively inhibited larval settlement of the tubeworm Hydroides elegans and of cyprids of the barnacle Balanus amphitrite. The inhibitive effect on larval settlement was nontoxic and the EC50 of 3-chloro-2,5-dihydroxybenzyl alcohol ranged from 3.19 mu g ml(-1) to 3.81 mu g ml(-1) while the LC50 was 266.68 lambda g ml(-1) for B. amphitrite cyprids; EC50 ranged from 0.67 mu g ml(-1) to 0.78 mu g ml(-1), and LC50 was 2.64 mu g ml(-1) for competent larvae of H. elegans, indicating that inhibitive effect of this compound was nontoxic. At a concentration of 50 mu g per disc, this compound showed strong inhibitive effects on the growth of 13 out of 15 marine bacterial species tested in disc diffusion bioassay. Overall, the high inhibitory activities against bacteria and larval settlement as well as the non- or low-toxic nature of this compound to the barnacle and polychaete larvae suggest this compound could be a potent antifoulant and/or antibiotic.

Sedimentation rates and provenance analysis in the Southwestern Okinawa Trough since the mid-Holocene

As a high-sedimentation rate depocenter along the path of the Kuroshio Current, the southwesternmost part of the Okinawa Trough is a key area to understand the Kuroshio history and sediments transportation. A 34.17-m-long sediment core was obtained by the advanced piston corer of Marco Polo/IMAGES XII MARION DUFRESNE during the May 2005 from the Southern Okinawa Trough at site MD05-2908. The recovered sediments were analyzed by AMS C-14 dating, coarse size fraction (> 63 mu m) extraction and moisture content determination in order to study its sedimentation flux and provenance. The depth-age relationship of core MD05-2908 was well constrained by 17 C-14 dating points. The sediments span across the mid-Holocene (6.8 ka B.P.) and have remarkablely high sedimentation rates between 1.8 and 21-2 m/ka, which is well consistent with the modern observations from sediment traps. We identified five 70-200 a periods of abnormally rapid sedimentation events at 6790-6600 a B.P., 5690-5600 a B.P., 4820-4720 a B.P., 1090-880 a B.P., and 260-190 a B.P., during which the highest sedimentation rate is up to 21-2 m/ka. In general, the lithology of the sediments were dominated by silt and clay, associated with less than 5% coarse size fraction (a parts per thousand << 63 mu m). As the most significant sediment source, the Lanyang River in northeastern Taiwan annually deliver about 10Mt materials to the coastal and offshore region of northeast Taiwan, a portion of which could be carried northward by currents toward the study area. Therefore, we concluded that the 5 abnormally rapid sedimentation events may be related to intensified rainfall in Taiwan and thus increased materials to our study area at that time. However, a few extreme-rapid sedimentation events cannot be explained by normal river runoff alone. The large earthquakes or typhoons induced hyperpycnal discharge of fluvial sediment to the ocean may also act as a potential source supply to the Okinawa Trough.

Synthesis and perfection evaluation of NaA zeolite membrane

The synthesis of NaA zeolite membrane on a porous alpha -Al2O3 support from clear solution and the evaluation of the perfection of the as-synthesized membrane by gas permeation were investigated. When an unseeded support was used, the NaA zeolite began to transform into other types of zeolites before a continuous NaA zeolite membrane formed. When the support was coated with nucleation seeds, not only the formation of NaA zeolite on the support surface was accelerated, but also the transformation of NaA zeolite into other types of zeolites was inhibited. A continuous NaA zeolite membrane can be formed. Perfection evaluation indicated that the NaA zeolite membrane with the synthesis time of 3 h showed the best perfection after a one-stage synthesis. The perfection of NaA zeolite membrane can be improved by employing the multi-stage synthesis method. The NaA zeolite membrane with a synthesis time of 2 h after a two-stage synthesis showed the best gas permeation performance, The permselectivity of H-2/n-C4H10 and O-2/N-2 were 19.1 and 1.8, respectively, higher than those of the corresponding Knudsen diffusion selectivity of 5.39 and 0.94, which showed the molecular sieving effect of NaA zeolite. However, the permeation of n-C4H10 also indicated that the NaA zeolite membrane had certain defects, the diameter of which were larger than the NaA zeolite channels. (C) 2001 Elsevier Science B.V. All rights reserved.

Spherical nanometer-sized diamond obtained from detonation

Ultrafine diamond (UFD) was synthesized under high pressure and high temperatures generated by explosive detonation. The structure, composition, surface and thermal stability of UFD were studied by use of XRD, TEM, Raman Spectroscopy, FTIR, etc. The influences of the synthesis conditions and purification conditions on the properties of UFD were analyzed. The UFD had an average size of 4-6 nm, commonly exhibiting a spherical shape. The highest yield was of up to 10 mass% of the explosive. Attempts were made to use UFD as an additive to metal-diamond sintering and as crystallite seeds of CVD diamond films. The results show that UFD can decrease the coefficient of friction of the composite by 30%, and raise the nucleation density in CVD diamond films by 2-3 times.

荔枝果实采后褐变及果皮过氧化物酶的提纯与性质研究

本文对荔枝果实采后贮藏中的关键问题果皮褐变的相关生理活动进行了研究。研究了采后荔枝果皮的总酚含量、花色素类物质含量、多酚氧化酶和过氧化物酶活性等在贮藏期间的变化，并就这些因素与荔枝果实采后贮藏和果皮褐变的关系进行了讨论。实验表明，在荔枝果实的采后贮藏过程中，果皮中的酚类物质、花色素苷类物质、多酚氧化酶和过氧化物酶等共同参与了导致荔枝果皮褐变的生理过程。 比较了荔枝果实在几种不同的气调环境中的贮藏效果和生理指标。结果表明高氧短时处理对于延长荔枝果实贮存时间，延缓果皮褐变有很好的效果。 过氧化物酶在以往的果实褐变过程的研究中一直没有得到足够的重视，对于荔枝果皮过氧化物酶的提纯和性质的研究也较少。为了研究过氧化物酶在褐变过程中的作用，进一步了解荔枝果皮褐变的机理，本文对荔枝果皮过氧化物酶进行了提纯。采用低浓度中性磷酸缓冲液抽提。纯化过程采用了硫酸铵分级沉淀、DEAE Sephadex A-50离子交换柱层析、Sephadex G-100凝胶过滤等技术，比较并摸索出提取和纯化的合适方法和条件，本文对该酶的热稳定性、pH 适应性、底物专一性、反应动力学参数和抑制剂等性质进行了研究，发现该酶热稳定很高，具有较广的pH适应范围，能催化双氧水氧化多种底物，对酚类物质的催化氧化能力很强。表明过氧化物酶在荔枝果皮的采后褐变过程中起重要作用，为荔枝果皮采后褐变的机理和荔枝果皮保色技术研究提出了新的探索方向。

光系统I及其亚组分的分离纯化与光破坏特性的研究

光系统I（photosystem I，PSI）是光合膜上参与光合作用原初反应过程的主要膜蛋白超分子复合体之一。高等植物的PSI是由核心复合体（14个亚基）和捕光色素蛋白复合体I（light-harvesting complex I, LHCI，含4个Lhca蛋白）组成的超分子复合体，它的主要功能是调节光诱导的从囊腔侧的质体兰素（plastocyanin，PC）向基质侧的铁氧还蛋白（ferredoxin，Fd）的电子传递。研究PSI的结构与功能对于揭示植物光合作用高效吸能、传能的分子机理具有重要意义。在本文中，我们首先建立了分离制备PSI及其亚组分的方法（Qin et al., 2007），并在此基础上对PSI在强光破坏的过程中结构与功能的变化进行了比较深入的研究。本论文的主要研究结果如下： 1．快速、高效分离纯化PSI及其亚组分方法的建立。 国际上传统的PSI分离方法（Bassi and Simpson, 1987; Croce et al., 1998; Påsllon et al.1995; Schmid et al. 2002），耗时长较长（分离PSI颗粒一般需要多于20h的蔗糖超速离心过程，而分离PSI的亚组分则需要25-60h的蔗糖超速离心过程）、得率较低，这不便于PSI方面的研究，为此我们首先改进了传统的分离纯化方法。新方法以高等植物菠菜叶片作为原材料，使用Triton X-100作为增溶剂，通过差速离心技术获得的粗制品，然后使用十二烷基麦芽糖苷(n-Dodecyl β-D-maltoside, DDM)增溶PSI粗制品，之后采用100,000×g，垂直转头（Beckman VTi 50）0.1-1 mol/L蔗糖梯度离心3h获得纯度较高的PSI颗粒。然后使用DDM和3-(N, N-Dimethylpalmitylammonio) propanesulfonate （zw 3-16）两种增溶剂处理PSI，后经100,000×g，垂直转头（Beckman VTi 50）蔗糖梯度离心4h获得纯度较高的PSI core、LHCI-680、LHCI-730复合体。采用吸收光谱、荧光光谱技术研究了各样品的基本光谱学特性，采用HPLC分析了各样品的色素组成，结果显示平均每个Lhca蛋白结合1.5-1.6黄体素，1.0紫黄质, 0.8-1.1 β-胡萝卜素，该方法制备的LHCI比传统方法制备的LHCI减少了类胡萝卜素的丢失。这一工作为以后结构与功能的研究工作奠定了良好的基础。 2．PSI复合体及其亚组分的特性研究。 PSI颗粒具有一定的适应环境酸碱变化的能力，在我们的试验条件下PSI颗粒在pH 5-10相对稳定。PSI、LHCI很难通过加入Mg2+、Ca2+、Na+阳离子聚集沉淀。经绿胶鉴定我们制备的LHCI-680、LHCI-730是二聚体形式;而把PSI绿胶后再进行第二向十二烷基硫酸钠－聚丙烯酰氨凝胶电泳（SDS-PAGE）电泳，结果发现在稍强烈的绿胶增溶条件下，LHCI-730是以二聚体的形式存在，但是LHCI-680却是以单体的形式出现。这说明LHCI形成的二聚体，尤其是LHCI-680，较容易受到增溶处理而分离成单体形式，解释了以生化分离手段得到的LHCI-680的聚集形式是单体还是二聚体这个目前国际上还有有争议的问题。 3．PSI、LHCI光破坏的基本特点。 采用白光（2500 μmol•m-2•s-1）照射PSI颗粒，通过SDS-PAGE及室温吸收光谱检测光照过程中PSI复合体的变化，结果表明：去氧处理能够大大延缓PSI的光破坏，而PSI脱辅基蛋白不会发生光破坏，这说明PSI发生的光破坏可能与Chl与O2的相互作用有关。采用白光（1000 μmol•m-2•s-1、300 μmol•m-2•s-1）处理LHCI-680、LHCI-730，发现LHCI-680被破坏的速度明显快于LHCI-730被破坏的速度，这是首次在体外分离的水平上揭示了不同LHCI光破坏方面的差异。LHCI-680与LHCI-730在光破坏方面的差异可能与两种天线蛋白结合的类胡萝卜素的种类和数量不同有关，还可能与二者结合的长波长Chl的情况有关，但是具体的原因还有待于进一步的研究。 4．结合不同的捕光色素蛋白复合体（light-harvesting complex，LHC）对PSI光破坏的影响。 为了研究结合不同的捕光天线对PSI光破坏的影响，我们制备了PSI-LHCII、PSI、PSI core三种复合体。使用白光（2500 μmol•m-2•s-1）照射这三种复合体，并通过测定各复合体在光破坏过程中蛋白亚基、吸收光谱、PSI活性及P700含量的变化，对比三者光破坏的速度，结果发现PSI-LHCII在这三种复合体中光破坏速度最快，而PSI和PSI core两种复合体光破坏速度基本一致。我们推测在光照过程中部分光系统II捕光Chl a/b蛋白复合体II（light-harvesting complex II，LHCII）能够向PSI core传递能量，另外PSI-LHCII绿胶分析的结果表明发生了LHCII三聚体向单体的转变，这种强光下发生的LHCII聚合形式的转化可能是高光强下调节光能捕获的一种机制，由于植物体内具有较完整的保护系统，体内PSI-LHCII的光破坏可能与体外情况不同;另外LHCI与PSI core的解离可能发生在强光照射的早期，具有保护PSI core减少光破坏的积极作用。该部分的研究首次观察了结合不同的捕光天线对PSI光破坏的影响。

无指盘自蛙皮肤分泌液中促胰岛素释放肽的分离纯化与活性初步研究

通过葡聚糖 Sephadex G-50凝胶过滤和反相高压液相层析等手段,对无指盘臭蛙皮肤分泌液进行分离纯化,得到了高纯度的多肽分离峰.分别采用体外培养的大鼠胰岛和INS-1胰岛β细胞系检测分离峰的促胰岛素释放活性.结果表明,所得多肽既可促进原代培养的大鼠胰岛分泌胰岛素,又可以促进INS-1细胞胰岛素释放;运用飞行质谱仪测定该促胰岛素释放肽的相对分子质量,其大小为1 868.此外,利用鸡胚尿囊绒毛膜(CAM)体内模型检测,发现该多肽还具有显著的抑制血管生成活性.

中华硬蜱血小板集聚抑制剂的分离纯化与活性研究

目的研究蜱类抗血小板集聚的生物活性成分, 了解其与其宿主相互作用的分子机制。方法用葡聚糖 Sephadex G-50 凝胶过滤及高效液相从半饱吸血的中华硬蜱(Ixodes sinensis) 唾液腺中分离纯化具有血小板集聚抑制活性 的蛋白质, 用飞行质谱测定该抑制剂的分子量, 并用兔富血小板血浆研究其血小板集聚抑制活性。结果通过液相分离, 从中华硬蜱唾液腺中得到了一种血小板集聚抑制剂, 用飞行质谱测定该抑制剂的相对分子质量(M r ) 为8 065。该抑制 剂对二磷酸腺苷(ADP) 诱导的血小板集聚表现强烈的抑制活性, 在浓度为10 μg/mL 时, 可以抑制90% 以上的血小板集 聚。结论首次分离获得中华硬蜱唾液腺血小板集聚抑制剂, 该抑制剂对硬蜱顺利获取宿主血餐至关重要。

HIV一1蛋白酶的表达、纯化及其抑制剂体外筛选方法的建立

：从HIV．1ⅡIB病毒RNA经RT—PCR得到HIV一1蛋白酶编码序列，克隆到pet28a质粒中构建HIV一1蛋白酶 表达载体。阳性克隆转染E．coli BL21 DE3，经IPTG诱导，蛋白酶以包涵体的形式表达，表达量占菌体总蛋白量 的40％。包涵体经Triton X．100洗涤后溶解于8M尿素，溶解后的蛋白溶液经sephacyl s一200 H．R分子筛柱纯化后 纯度达到90％以上，收集蛋白酶峰稀释复性并通过超滤进行浓缩。经检测，纯化的蛋白酶具有较高的活性。用荧 光标记的蛋白酶底物检测不同浓度indinavir对蛋白酶活性的影响，表明该方法可以用于蛋白酶抑制剂的筛选。

Variables affecting melanoidins removal from molasses wastewater by coagulation/flocculation

Coagulation/flocculation process was applied in the polishing treatment of molasses wastewater on a bench-scale. Important operating variables, including coagulant type and dosage, solution pH, rapid mixing conditions as well as the type and dosage of polyeletrolytes were investigated based on the maximum removal efficiencies of chemical oxygen demand (COD) and color, residual turbidity and settling characteristics of flocs. HPSEC was utilized to evaluate the removal of molecular weight fractions of melanoidins-dominated organic compounds. Experimental results indicate that ferric chloride was the most effective among the conventional coagulants, achieving 89% COD and 98% color eliminations; while aluminum sulfate was the least effective, giving COD and color reductions of 66% and 86%, respectively. In addition to metal cations, counter-ions exert significant influence on the coagulation performance since Cl--based metal salts attained better removal efficiency than SO42--based ones at the optimal coagulant dosages. Coagulation of molasses effluent is a highly pH-dependent process, with better removal efficiency achieved at lower pH levels. Rapid mixing intensity, rather than rapid mixing time, has relatively strong influence on the settling characteristics of flocs formed. Lowering mixing intensity resulted in increasing settling rate but the accumulation of floating flocs. When used as coagulant aids, synthetic polyelectrolytes showed little effects on the improvement in organic removal. On the other hand, cationic polyacrylamide was observed to substantially enhance the settleability of flocs as compared to anionic polyacrylamide. The effects of rapid mixing conditions and polymer flocculants on the coagulation performance were discussed. (C) 2009 Elsevier B.V. All rights reserved.

Cell surface display of functionally active lipases from Yarrowia lipolytica in Pichia pastoris

The lipase genes of Yarrowia lipolytica, LIPY7 and LIPY8, fused with FLO-flocculation domain sequence from Saccharomyces cerevisiae at their N-termini, were expressed in Pichia pastoris KM71. Following the induction with methanol, the recombinant proteins were displayed on the cell surface of P. pastoris, as confirmed by the confocal laser scanning microscopy. The LipY7p and LipY8p were anchored on P. pastoris via the flocculation functional domain of Flo 1 p. The surface-displayed lipases were characterized for their application as the whole-cell biocatalyst. These lipases can also be cleaved off from their anchor by enterokinase treatment to yield functionally active proteins in the supernatant offering an alternative purification method for LipY7p and LipY8p. (c) 2007 Elsevier Inc. All rights reserved.

Viruses' complete genomes classification based on geometrical learning

In this paper, we proposed a method of classification for viruses' complete genomes based on graph geometrical theory in order to viruses classification. Firstly, a model of triangular geometrical graph was put forward, and then constructed feature-space-samples-graphs for classes of viruses' complete genomes in feature space after feature extraction and normalization. Finally, we studied an algorithm for classification of viruses' complete genomes based on feature-space-samples-graphs. Compared with the BLAST algorithm, experiments prove its efficiency.

Surface plasmon coupling in hexagonal textured metallic microcavity

The coupling of surface plasmons to the photonic modes in hexagonal textured metallic microcavity was studied. The modified photonic modes enable efficient coupling with the luminescence source in the microcavity. Hexagonal photonic crystal lattice has higher folding symmetry providing more channels for surface plasmon coupling in different in-plane directions, i.e., more isotropic light extraction profile than one-or two-dimensional gratings. Results show that strong coupling between surface plasmon modes and the waveguide mode in the microcavity has led to angle-selective enhanced light extraction and it was as much as 12 times more light extracted compare to planar microcavity. (c) 2006 American Institute of Physics.