Karyotype Differentiation in Newly Discovered Members of the Drosophila obscura Species Group from Yunnan , China

观察了新近发现于我国云南的果蝇属暗果蝇种组( Drosophila obscura species group ) 种类 D1luguensis 、D1 dianensis 和D1limingi 的有丝分裂中期核型, 并将3 个种的核型与各自的近缘种类进行了比较。 D1luguensis 具2n = 12 条染色体, 包括3 对中央着丝粒(V 形) 染色体、2 对近端着丝粒(棒状) 染色体以及1 对微小(点状) 染色体。其中X 和Y染色体均为中央着丝粒染色体。D1 dianensis 和D1limingi 具2n = 10 条染 色体, 包括1 对大的V 形常染色体, 1 对小的V 形常染色体, 2 对J 形(亚中着丝粒型) 常染色体和1 对点状染 色体。其中X 染色体为J 形, Y染色体为短棒状。基于核型比较的结果以及D1sinobscura 亚组地理分布的资料, 结合种间系统发育关系研究结果, 认为D1 luguensis 可能保留了该亚组祖先种类的核型。D1sinobscura 的核型(2n = 12 : 2V , 1J , 2R , 1D) 可能由一个pre2“sinobscura2hubeiensis”谱系的一个分支通过臂间倒位演化而来, 而D1 hubeiensis 的核型(2n = 10 : 4V , 1D) 可能由该谱系的另一分支通过着丝粒融合(2 对近端着丝粒常染色 体的融合) 而形成。推测在D1 dianensis 和近缘欧洲种D1subsilvestris (2n = 12 : 3V , 2R , 1D) 间、D1limingi 和 东亚近缘种D1tsukubaensis (2n = 12 : 3V , 2R , 1D) 间的物种分化过程中, 可能有相似的染色体变异类型发生。

Evolutionary trends of the mitochondrial lineage differentiation in species of genera Martes and Mustela

We compared partial sequences (402 bp) of the mitochondrial cytochrome b gene in 68 individuals of martens (Martes), weasels (Mustela) and their relatives from the Northern Hemisphere to identify the modes of geographic differentiation in each species. We then compared complete sequences (1140 bp) of the gene in 17 species of the family Mustelidae to know the spatial and temporal modes of speciation, constructing linearized trees with transversional substitutions for deeper lineage divergences and with transversions and transitions for younger lineages. Our data suggested that these lineages of Martes and Mustela differentiated in a stepwise fashion with five radiation stages from the generic divergences (stage I) to the intraspecific divergences (stage V), during the last 10 or 20 million years as the fossil evidence suggests. In the lineage of Martes, the first offshoots are of Martes flavigula, M. pennanti, and Gulo gulo (stage II), the second is M. foina (stage III), and the third are M. americana, M. martes, M. melampus, and M. zibellina (stage IV). The divergence of the lineages of Mustela is likely to have taken place concurrently with the radiations of the Martes. These divergence processes are attributable in part to the geographic allocation along the two continents, North America and Eurasia, as well as among peripheral insular domains, such as Taiwan and the Japanese Islands. In addition, the Eurasian continent itself was shown to have been involved in the species diversification in the martens and weasels.

Phylogeographic differentiation of mitochondrial DNA in Han Chinese

To characterize the mitochondrial DNA (mtDNA) variation in Han Chinese from several provinces of China, we have sequenced the two hypervariable segments of the control region and the segment spanning nucleotide positions 10171-10659 of the coding region,

Mitochondrial DNA variation, effective female population size and population history of the endangered Chinese sturgeon, Acipenser sinensis

The anadromous Chinese sturgeon (Acipenser sinensis), mainly endemic to the Yangtze River in China, is an endangered fish species. The natural population has declined since the Gezhouba Dam blocked its migratory route to the spawning grounds in 1981. In the near future, the completion of the Three Gorges Dam, the world's largest hydroelectric project, may further impact this species by altering the water flow of the Yangtze River. Little is currently known about the population genetic structure of the Chinese sturgeon. In this study, DNA sequence data were determined from the control region (D-loop) of the mitochondrial genome of adult sturgeons (n = 106) that were collected between 1995-2000. The molecular data were used to investigate genetic variation, effective female population size and population history of the Chinese sturgeon in the Yangtze River. Our results indicate that the reduction in abundance did not change genetic variation of the Chinese sturgeon, and that the population underwent an expansion in the past. AMOVA analysis indicated that 98.7% of the genetic variability occurred within each year's spawning populations, the year of collection had little influence on the diversity of annual temporary samples. The relative large effective female population size (N-ef) indicates that good potential exists for the recovery of this species in the future. Strikingly, the ratio of N-ef to the census female population size (N-f) is unusually high (0.77-0.93). This may be the result of a current bottleneck in the population of the Chinese sturgeon that is likely caused by human intervention.

Genetic differentiation and cryptic speciation in natural populations of Drosophila lacertosa

Drosophila lacertosa, an Oriental member of the robusta species group in the virilis-repleta radiation, has a wide distribution from northern India throughout China to the Far East. Phylogenetic analyses of mitochondrial ND2 gene sequences revealed two ge

Positive selection drives population differentiation in the skeletal genes in modern humans

During the course of evolution, the human skeletal system has evolved rapidly leading to an incredible array of phenotypic diversity, including variations in height and bone mineral density. However, the genetic basis of this phenotypic diversity and the relatively rapid tempo of evolution have remained largely undocumented. Here, we discover that skeletal genes exhibit a significantly greater level of population differentiation among humans compared with other genes in the genome. The pattern is exceptionally evident at amino acid-altering sites within these genes. Divergence is greater between Africans and both Europeans and East Asians. In contrast, relatively weak differentiation is observed between Europeans and East Asians. SNPs with higher levels of differentiation have correspondingly higher derived allele frequencies in Europeans and East Asians. Thus, it appears that positive selection has operated on skeletal genes in the non-African populations and this may have been initiated with the human colonization of Eurasia. In conclusion, we provide genetic evidence supporting the rapid evolution of the human skeletal system and the associated diversity of phenotypes.

The Effects of Visual Object Size in The Depth Perception in KM Mouse

Whether mice perceive the depth of space dependent on the visual size of object targets was explored when visual cues such as perspective and partial occlusion in space were excluded. A mouse was placed on a platform the height of which is adjustable. The platform located inside a box in which all other walls were dark exception its bottom through that light was projected as a sole visual cue. The visual object cue was composed of 4x4 grids to allow a mouse estimating the distance of the platform relative to the grids. Three sizes of grids reduced in a proportion of 2/3 and seven distances with an equal interval between the platform and the grids at the bottom were applied in the experiments. The duration of a mouse staying on the platform at each height was recorded when the different sizes of the grids were presented randomly to test whether the Judgment of the mouse for the depth of the platform from the bottom was affected by the size information of the visual target. The results from all conditions of three object sizes show that time of mice staying on the platform became longer with the increase in height. In distance of 20 similar to 30 cm, the mice did not use the size information of a target to judge the depth, while mainly used the information of binocular disparity. In distance less than 20 cm or more than 30 cm, however, especially in much higher distance 50 cm, 60 cm and 70 cm, the mice were able to use the size information to do so in order to compensate the lack of binocular disparity information from both eyes. Because the mice have only 1/3 of the visual field that is binocular. This behavioral paradigm established in the current study is a useful model and can be applied to the experiments using transgenic mouse as an animal model to investigate the relationships between behaviors and gene functions.

Differentiation of subspecies of asiatic striped squirrels (Tamiops swinhoei) (Milne-Edwards) (Rodentia : Sciuridae) in China with description of a new subspecies

Based on the pelage characteristics and results of multivariate and univariate analyses, a new subspecies is described in this study, and a taxonomic revision of Tamiops swinhoei from China is presented. In total, 123 specimens of Tamiops swinhoei were in

Group Size and Composition of Black．and．White Snub．nosedMonkey(rhinopithecus)Estimated by Faecesof Sleeping Sites at Baima Snow Mountain

介绍了应用过夜地粪便来估计白马雪山黑白仰鼻猴群大小和组成的一种方法。该物种以单雄多雌单 元和全雄组的形式在树上过夜。粪粒根据其大小可分为3种类型：成年雄性的(最大)、成年雌性的(中等大小)和 未成年个体的(最小)。2000一2001年，搜集了滇西北白马雪山国家级自然保护区北部南任村(99。04 7E，28。34 7N) 附近黑白仰鼻猴群每个季节2个过夜地的粪粒。根据2001年11月猴群通过开阔地的数据来确定猴群组成。每个 季节，由于单雄多雌单元的成年个体数与其粪粒数正相关，所以二者回归直线的斜率可以看作是每个个体每晚 的平均排便量。由于该物种的栖息地主要为高山峡谷，而且能见度较低，因此，利用过夜地粪便比以前通过猴群 活动痕迹来估计猴群大小和组成相对准确、可靠。从估计成年雌性个体数的角度看，利用粪粒来估计种群大约有 9．4％的偏差。导致偏差的可能原因有杂草和灌丛对粪粒准确计数的影响、个体排粪率的差异以及成年雄性最小 粪粒与成年雌性最大粪粒的混淆等。该方法适应于栖息地和主要食物与本文研究种群相似的其他种群。

CRANIODENTAL VARIATION OF MACAQUES ( Macaca ): SIZE,FUNCTION AND PHYLOGENY

为了研究猕猴属的颅骨差异性, 从而探 讨种间在形态、功能和系统分化方面的相互联系, 测定了11 个猕猴种类的77 个颅骨变量, 用于主成 分分析和判别分析。应用巢式分析方法, 分析过程 包括3 个步骤。所有变量根据功能和部位的不同首 先分为7 个单位: 下颌、下颌齿、上颌齿、上面 颅、下面颅、面颅后部和颅腔。第2 步根据它们所 揭示的相似性(具有相同的种间及种内差异性类 型) 合并为3 个解剖区域: 咀嚼器官(下颌、下颌 齿、上颌齿) , 面颅(上面颅和下面颅) 和整个面 颅后(面颅后和颅腔) 。第3 步从3 个解剖区域筛 选出27 个变量代表整个颅骨的形态结构。除了寻 找不同的功能单位, 解剖区域及总的颅骨具有不同 的种间和种内差异类型外, 此过程对筛出研究意义 不大的变量起很重要的作用。上述分析过程分别用 于对雌、雄性和两性的研究。所研究的11 个猕猴 种类间形成了3 聚类。第1 类包括食蟹猴(Macaca f ascicularis) 、戴帽猴( M1 sinica) 和头巾猴( M1 radiata) ; 第2 类包括猕猴( M1 mulatta ) 、熊猴 (M1 assensis ) 、平顶猴( M1 nemestrina ) 和黑猿 (M1 nigra) ; 第3 类包括蛮猴( M1 sylvanus ) 、日 本猴( M1 f uscata) 、短尾猴( M1 arctoides ) 和藏 酋猴(M1 thibetana) 。分别从两性差异、食物、生态、分类和系统分化方面进行了差异性讨论, 结果 认为猕猴种间颅骨的差异性主要是由于系统分化不 同而引起个体差异所致, 即种间和种内存在的个体 差异。在主成分分析中, 这些差异在不同的区域表 现在不同的成分上。在咀嚼器官上种间的差异在第 1 主成分上, 种内的差异则在第2 主成分上。面颅 的情况则刚好相反。这两种差异在面颅后及颅腔上 则被第1 和第2 主成分所平分。这样, 种间的差异 在咀嚼器官上大于种内的差异。种内的差异在面颅 上则大于种间的差异。这两种差异在面颅后和颅腔 上则几乎大小相等。这一研究结果表明, 与传统的 概念不同, 第2 主成分不仅仅表现形态、形状的差 异, 而如同第1 主成分一样, 也表现形态的大小成 分。此研究所揭示的猕猴种间关系部分与Foden (1976 , 1980) 和Delson (1980) 相同。如平顶猴 与黑猿、短尾猴、藏酋猴和熊猴的关系。食蟹猴、 头巾猴和戴帽猴的关系则不同, 并已得到有关分子 生物学的支持, 此3 种可能来自同一祖先并经历相 同的扩散过程。此研究所设计的巢式分析过程提供 了一种很好的差异性研究手段。最终结果暗示在形 态学研究中仅仅考虑某一区域的形态结构是很不够 的, 因为不同的部分具有不同的种间及种内差异类 型。这在化石研究中尤其要注意。

CLASSIFICATION AND EVOLUTION OF ASIAN COLOBINES

In order to study the differentiation of Asian colobines, 14 variables measured on 123 skulls, including Rhinopithecus, Presbytis, Presbytiscus (Rhinopithecus avunculus), Pygathrix and Nasalis were analyzed by one-way, cluster and discriminant function analyses. Information on paleoenvironmental changes in China and southeast Asia since the late Tertiary was used to examine the influences of migratory routes and range of distribution in Asian colobines. A cladogram for 6 genera of Asian colobines was constructed from the results of various analyses. Some new points or revisions were suggested: (1) Following one of two migratory routes, ancient species of Asian colobines perhaps passed through Xizang (Tibet) along the northern bank of the Tethys sea and through the Heng Duan Shan regions of Yunnan into Vietnam. An ancient landmass linking Yunnan and Xizang was already present on the east bank of the Tethys sea. Accordingly, Asian colobines would have two centers of evolutionary origin: Sundaland and the Heng Duan Shan regions of China. (2) Pygathrix shares more cranial features with Presbytiscus than with Rhinopithecus. This differs somewhat from the conclusion reached by Groves. (3) Nasalis (karyotype: 2n = 48) may be the most primitive genus among Asian colobines. Certain features shared with Rhinopithecus, e.g. large body size, terrestrial activity and limb proportions, can be interpreted as symple-siomorphic characters. (4) Rhinopithecus, with respect to craniofacial features, is a special case among Asian colobines. It combines a high degree of evolutionary specialization with retention of some primitive features thought to have been present in the ancestral Asian colobine.

THE ORIGIN AND GENETIC DIFFERENTIATION OF NATIVE BREEDS OF PIGS IN SOUTHWEST CHINA - AN APPROACH FROM MITOCHONDRIAL-DNA POLYMORPHISM

Mitochondrial DNA (mtDNA) of six breeds of native domestic pigs from Yunnan province, southwest China, and two wild boars obtained from Sichuan, China, and Vietnam was analyzed using 20 restriction endonucleases that recognize six nucleotides. Restriction maps were made by double-digestion methods and polymorphic sites were located on the map. According to their mtDNA restriction types, all the breeds were classified into six groups. Genetic distances among groups were calculated to define their phylogenetic relationships. The relationship between the Sichuan wild boar and domestic pigs is close, while the Vietnamese wild boar is relatively far from them, so the domestic pigs in southwest China are likely to have originated from a wild pig which distributed in west China. We compare our results with previous reports in literature and discuss the relationship among Chinese pigs, Japanese pigs, and European pigs. The mtDNA cleavage pattern of the Mingguang pig digested by EcoRV was identical to that of Duroc; mutations at the EcoRI site, detected in the mtDNA of two Dahe pigs, are the same as in the Vietnamese wild boar, suggesting that mutational hot spots exist in the mtDNA of pigs.