Quantifying annual variation in catchability for commercial and research fishing

Biomass indices, from commercial catch per unit of effort (CPUE) or random trawl surveys, are commonly used in fisheries stock assessments. Uncertainty in such indices, often ex-pressed as a coefficient of variation (CV), has two components: observation error, and annual variation in catchability. Only the former can be estimated directly. As a result, the CVs used for these indices either ignore the annual-variation component or assume a value for it (often implicitly). Two types of data for New Zealand stocks were examined: 48 sets of residuals and catchability estimates from stock assessments using either CPUE or trawl survey indices; and biomass estimates from 17 time series of trawl surveys with between 4 and 25 species per time series. These data show clear evidence of significant annual variation in catchability. With the trawl survey data, catchability was detectably extreme for many species in about one year in six. The assessment data suggest that this annual variability typically has a CV of about 0.2. For commercial CPUE the variability is slightly less, and a typical total CV (including both components) of 0.15 to 0.2. This is much less than the values of 0.3 to 0.35 that have commonly been assumed in New Zealand. Some estimates of catchability are shown to be implausible.

Scales of spatial variation in demography of a large coral-reef fish: an exception to the typical model?

Spatial variation in demographic parameters of the red throat emperor (Lethrinus miniatus) was examined among 12 coral reefs in three geographic regions (Townsville, Mackay, and Storm Cay) spanning over 3° of latitude of the Great Barrier Reef, Australia. Estimates of demographic parameters were based on age estimates from counts of annuli in whole otoliths because there was no significant difference in age estimates between whole and sectioned otoliths. There were significant regional differences in age structures, rates of somatic and otolith growth, and total mortality. The Townsville region was characterized by the greatest proportion of older fish, the smallest maximum size, and the lowest rates of otolith growth and total mortality. In contrast the Mackay region was characterized by the highest proportion of younger fish, the largest maximum size, and the highest rates of otolith growth and total mortality. Demographic parameters for the Storm Cay region were intermediate between the other two regions. Historic differences in fishing pressure and regional differences in productivity are two alternative hypotheses given to explain the regional patterns in demographic parameters. All demographic parameters were similar among the four reefs within each region. Thus, subpopulations with relatively homogeneous demographic parameters occurred on scales of reef clusters. Previous studies, by contrast, have found substantial between-reef variation in demographic parameters within regions. Thus spatial variation in demographic parameters for L. miniatus may differ from what is assumed typical for a coral-reef fish metapopulation.

Allozyme and RAPD variation in the eastern Pacific yellowfin tuna (Thunnus albacares)

Stock structure of eastern Pacific yellowfin tuna was investigated by analyzing allozymes and random amplified polymorphic DNAs (RAPDs) from 10 samples of 20–30 individuals each, collected between 1994 and 1996 from fishing vessels operating in the Inter-American Tropical Tuna Commission (IATTC) yellowfin regulatory area (CYRA). Allozyme analysis resolved 28 loci, eight of which were polymorphic under the 0.95 criterion: Aat-S*, Glud, Gpi-F*, Gpi-S*, La, Lgg, Pap-F*, and 6-Pgd, resulting in a mean heterozygosity over all allozyme loci of H = 0.052. Four polymorphic RAPD loci were selected for analysis, resulting in a mean heterozygosity of H = 0.43. Eight of 45 pairwise comparisons of allozyme allele frequencies among the ten samples showed significant differences after correction for multiple testing (P<0.0001), all of which involved comparisons with the Gulf of California sample. Confirmation of this signal of population structure would have management implications. No significant divergence in RAPD allele frequencies was observed among samples. Weir and Cockerham θ estimated for allozyme loci (θ=0.048; P<0.05) and RAPD loci (θ=0.030; P>0.05) revealed little population structure among samples. Mantel tests demonstrated that the genetic relationships among samples did not correspond to an isolation-by-distance model for either class of marker. Four of eight comparisons of coastal and offshore samples revealed differences of allele frequencies at the Gpi-F* locus (P<0.05), although none of these differences was significant after correction for multiple testing (P>0.001). Results are consistent with the hypothesis that the CYRA yellowfin tuna samples comprise a single genetic stock, although gene flow appears to be greater among coastal samples than between coastal and offshore samples.

Population status, seasonal variation in abundance, and long-term population trends of Steller sea lions (Eumetopias jubatus) at the South Farallon Islands, California

We examined seasonal and annual variation in numbers of Steller (northern) sea lions (Eumetopias jubatus) at the South Farallon Islands from counts conducted weekly from 1974 to 1996. Numbers of adult and subadult males peaked during the breeding season (May–July), whereas numbers of adult females and immature individuals peaked during the breeding season and from late fall through early winter (September–December). The seasonal pattern varied significantly among years for all sexes and age classes. From 1977 to 1996, numbers present during the breeding season decreased by 5.9% per year for adult females and increased by 1.9% per year for subadult males. No trend in numbers of adult males was detected. Numbers of immature individuals also declined by 4.5% per year during the breeding season but increased by 5.0% per year from late fall through early winter. Maximum number of pups counted declined significantly through time, although few pups were produced at the South Farallon Islands. The ratio of adult females to adult males averaged 5.2:1 and declined significantly with each year, whereas no trend in the ratio of pups to adult females was discernible. Further studies are needed to determine if reduced numbers of adult females in recent years have resulted from reduced survival of juvenile or adult females or from changes in the geographic distribution of females.

An examination of spatial and temporal genetic variation in walleye pollock (Theragra chalcogramma) using allozyme, mitochondrial DNA, and microsatellite data

We used allozyme, microsatellite, and mitochondrial DNA (mtDNA) data to test for spatial and interannual genetic diversity in wall-eye pollock (Theragra chalcogramma) from six spawning aggregations representing three geographic regions: Gulf of Alaska, eastern Bering Sea, and eastern Kamchatka. Interpopulation genetic diversity was evident primarily from the mtDNA and two allozyme loci (SOD-2*, MPI*). Permutation tests ˆindicated that FST values for most allozyme and microsatellite loci were not significantly greater than zero. The microsatellite results suggested that high locus polymorphism may not be a reliable indicator of power for detecting population differentiation in walleye pollock. The fact that mtDNA revealed population structure and most nuclear loci did not suggests that the effective size of most walleye pollock populations is large (genetic drift is weak) and migration is a relatively strong homogenizing force. The allozymes and mtDNA provided mostly concordant estimates of patterns of spatial genetic variation. These data showed significant genetic variation between North American and Asian populations. In addition, two spawning aggregations in the Gulf of Alaska, in Prince William Sound, and off Middleton Island, appeared genetically distinct from walleye pollock spawning in the Shelikof Strait and may merit management as a distinct stock. Finally, we found evidence of interannual genetic variation in two of three North American spawning aggregations, similar in magnitude to the spatial variation among North American walleye pol-lock. We suggest that interannual genetic variation in walleye pollock may be indicative of one or more of the following factors: highly variable reproductive success, adult philopatry, source-sink metapopulation structure, and intraannual variation (days) in spawning timing among genetically distinct but spatially identical spawning aggregates.

Decadal variation in the trans-Pacific migration of northern bluefin tuna (Thunnus thynnus) coherent with climate-induced change in prey abundance [abstract]

EXTRACT (SEE PDF FOR FULL ABSTRACT): Indices of the relative abundance of bluefin tuna in the western and eastern Pacific show decadal variation in the proportion of bluefin making trans-Pacific migrations out of the western Pacific.

A rock-magnetic and geomagnetic secular variation record from late-Pleistocene Lake Estancia, New Mexico [abstract]

EXTRACT (SEE PDF FOR FULL ABSTRACT): Exposed sediments of Late Pleistocene Lake Estancia contain a high resolution record of regional climate variability for the period about 12,000 to 32,000 years. A detailed rock-magnetic study is being performed on this well-dated, well-preserved sedimentary sequence to determine how the magnetic signature of sediments responded to regional climate change.

Seasonal variation in the proximate composition of rock oyster Saccostrea cucullata from Bombay coast

Changes in proximate composition of soft tissue of rock oyster Saccostrea cucullata inhabiting a polluted station at Bandra (stn. B) and a relatively clean area at Mudh Island (stn. M) were studied. An average protein content of 48.88 plus or minus 3.73 and 53.68 plus or minus 3.59% were recorded respectively for oysters from stns. M and B and the difference was significant. Mean carbohydrate content in oysters from stn. M amounted to 14.69 plus or minus 3.22 whereas at stn. B it was 8.70 plus or minus 1.61 and the difference was found highly significant. However, appreciable variation between stations was not observed in lipid and carbon content in oysters. Suitable periods for harvesting of these organisms are suggested.

Seasonal variation in the physico-chemical properties of Rushikulya estuary and its effect on the occurrence of Chanos fry

Seasonal variation in some physico-chemical properties of Rushikulya estuary was studied. The surface water temperature varied from 20 to 34.5 degree C, the transparency of the water from 6.3 to 12 cm, the salinity from 28.3 to 32.8 % and the pH from 6.77 to 7.35. The transparency and salinity showed bimodal distribution. Occurrence of the Chanos fry were correlated to it.

Biochemical variation during ovarian vitellogenic growth in a hill stream teleost Garra mullya (Sykes) due to cadmium toxicity

Some biochemical variations during ovarian vitellogenic growth in hill-stream teleost Garra mullya due to sublethal concentration of cadmium has been discussed. Total protein, cholesterol and glycogen in ovary and liver along with gonadosomatic index (GSI) and hepatosomatic index (HSI) in Cd-treated fish exhibited significant decrease while liver glycogen remained unaltered.

Seasonal variation and species diversity of fishes in the Neyyar River of the Western Ghats

Temporal variation in the abundance of fish populations and diversity of assemblages in different sections of the Neyyar River in the Western Ghats were investigated during the year 1984. A decreasing trend in the abundance of fishes from the headwaters downwards has been noted. The fish community is represented by 33 species assignable to 15 families. The diversity indices of Shannon-Wiener and Margalef and Pielou's evenness have been calculated. The diversity indices are discussed in the light of species richness in different sectors.

Intraspecific variation of isozymes in Arenicola marina (Polychaeta: Annelida)

Six enzyme systems, namely acid phosphatase, leucine aminopeptidase, phosphoglucose isomerase, tetrazolium oxidase, esterases and malate dehydrogenase were studied electrophoretically in Arenicola marina from various localities in United Kingdom. Out of 13 presumed loci, ten were found monomorphic. The three loci which appeared to be polymorphic are LAP-1, EST-2 and TO-1. Due to small sample size allele frequencies and genetic identity were not calculated. However, results indicate genetic difference among the population of A. marina.

Seasonal variation in the chemical composition of pomfrets. Pt. 1. Black pomfret (Parastromateus niger)

Seasonal variations in proximate composition of the different parts such as head, middle, tail and skin of black pomfret (Parastromateus niger) are reported over three years on monthly basis. The lean and fatty conditions of fish are discussed on the basis of spawning period, food and feeding activity, size group appearance and the gonadal maturity of the pomfret.

Relative abundance and diel variation of zooplankton from south west coast of India

Relative abundance and diurnal variations of zooplankton from six anchor stations along Kerala coast were investigated. Samples were collected during April-May 1988 at three hour intervals from depths varying between 15 and 40 m from the traditional fishing grounds of Kerala coast. Average biomass values ranged from 45-95 ml 100/mˉ³. Increase in zooplankton at night was discernible at most of the stations and the highest biomass noticed was 131 ml 100/mˉ³. Copepods formed the most abundant group, of which calanoids predominated. A swarm of the hydromedusan species, Aequorea conica, (181/mˉ³) was seen at night. Quantitative and qualitative variations of various zooplankton groups from six stations in relation to selected physicochemical factors are discussed. Maximum fish larvae were observed in the night samples. Relatively high abundance of sardines, carangids and flat fish larvae in the collections is in agreement with the predominance of fish catch from the area of study.

Seasonal variation of mixed layer depth in the north Arabian Sea

The Arabian Sea is unique due to the extremes in atmospheric forcing that lead to the semi-annual seasonal changes. The reversing winds of summer and winter monsoon induce the variation in the characteristics of mixed layer depth. The importance of mixed layer depth is recognized in studying the biological productivity in the ocean. In this paper variability of mixed layer depth in the north Arabian Sea have been discussed. The study is based on the data collected under North Arabian Sea Environment and Ecosystem Research (NASEER) program. The results of the study indicate that there is a significant variation in the mixed layer depth from summer to winter monsoon as well as coast to offshore.