Effect of analytical conditions in wavelength dispersive electron microprobe analysis on the measurement of strontium-to-calcium (Sr/Ca) ratios in otoliths of anadromous salmonids

The use of strontium-to-calcium (Sr/Ca) ratios in otoliths is becoming a standard method to describe life history type and the chronology of migrations between freshwater and seawater habitats in teleosts (e.g. Kalish, 1990; Radtke et al., 1990; Secor, 1992; Rieman et al., 1994; Radtke, 1995; Limburg, 1995; Tzeng et al. 1997; Volk et al., 2000; Zimmerman, 2000; Zimmerman and Reeves, 2000, 2002). This method provides critical information concerning the relationship and ecology of species exhibiting phenotypic variation in migratory behavior (Kalish, 1990; Secor, 1999). Methods and procedures, however, vary among laboratories because a standard method or protocol for measurement of Sr in otoliths does not exist. In this note, we examine the variations in analytical conditions in an effort to increase precision of Sr/Ca measurements. From these findings we argue that precision can be maximized with higher beam current (although there is specimen damage) than previously recommended by Gunn et al. (1992).

Eastern tropical Pacific corals monitor low latitude climate of the past 400 years

EXTRACT (SEE PDF FOR FULL ABSTRACT): We have measured coral growth band thickness and skeletal stable isotopic composition through a 371-year transect (AD 1583-1954) from a massive specimen of Pavona clavus from the Galápagos Islands. ... We observe a general cooling trend during 1860-1954, corresponding to the end of the Little Ice Age, an interval characterized by general warming at many mid-latitude sites. Variance at sunspot cycle frequencies in growth rate, stable isotopic, and trace element composition implies a direct or indirect link between the solar cycle and climate modulation in the eastern Pacific.

A new deep-sea crab, genus Chaceon, from the Arabian Sea (Crustacea, Decapoda, Geryonidae)

The sixth nominal species of Chaceon to be recorded from the western Indian Ocean is named from a specimen collected off Somalia in 504-506 meters. Chaceon somaliensis, n. sp., resembles C. macphersoni (Manning and Holthuis, 1988) and differs from the other four species known from the area in having the dactylus of the walking legs dorsoventrally depressed. It differs from C. macphersoni in having slenderer legs, a smoother body, and a much deeper, evenly curved orbit.

Portunus pulchricristatus (Gordon, 1931): an addition to crab fauna of Pakistan (northern Arabian Sea)

Portunus pulchricristatus (Gordon, 1931) is a rare species, to date we have obtained only three specimens, two males and a berried female which can be easily identified with the help of existing descriptions and illustrations. Brief account of the Pakistan material is given below. One male specimen (measuring 11.0 mm in carapace length) has been deposited in the National Museum of Natural History, Leiden (Reg.No.D.42393) the other two specimens housed in the Marine Reference Collection and Resource Centre (MRCC Cat. No.BRAC.491). The abbreviations used are cl. for carapace length and cb. for carapace breadth.

A northern Indian Ocean record of a bopyrid, Parapenaeon japonica (Thielemann, 1910) parasitic on species of penaeid prawns (Penaeus)

A female of Penaeus merguiensis de Man collected from Karachi fish harbour (8 May, 1993) was with a large specimen of bopyrid in its right gill chamber. Since this was the second record (see Tirmizi and Bashir, 1973) of a bopyrid from a species other than Parapenauopsis stylifera H. Milne-Edwards the specimen was examined out of curiosity.

Sinum haliotoideum (Linnaeus, 1758), a gastropod mollusc new to the marine waters of Pakistan (northern Arabian Sea)

Sinum haliotoideum (Linnaeus, 1758) was collected on only two occasions. However, it was given attention when the recently collected specimen netted on 24 August, 1993 was brought live to the laboratory where its movement towards the source of light was noticed, leading to a careful examination and illustration. The specimen survived for 4 days. Illustrations and shell from the earlier collected specimen (August, 1991) were sent to Dr. Alan R. Kabat, division of Mollusck, National Museum of Natural History, Smithsonian Institution, USA, who confirmed that the specimen was Sinum haliotoideum (Linnaeus, 1758). He further informed that this is a moderately common Indo-Pacific species. The material has been deposited in the collections of the Marine Reference Collection and Resource Centre. (MRC) The species being new to the region is briefly described.

First record of Holothuria (Platyperona) difficilis Semper, 1868 (Echinodermata:Holothuroidea) from the northern Arabian Sea (Pakistan)

During the 1994 winter collections, a small holothurian was collected from the rocky shore of Buleji (24°50'N, 66°53'E). It was attached to the green seaweed, Ulva fasciata and was not immediately noticed due to the same basic colour of the body as that of the seaweed. For identification a microscope slide of the spicules was prepared by placing a small piece of skin on a slide and treating it with (3.5%) sodium hypo-chloride (common household bleach). The specimen was identified as Holothuria (Platyperona) difficilis Semper, 1868.

Results of the Austrian-Ceylonese hydrobiological mission 1970 of the 1st Zoological Institute University of Vienna (Austria) and the Department of Zoology of the Vidyalankara University of Ceylon, Kelaniya. Pt 18. Freshwater musssels bivalvia

Till now there have been only two families of Bivalves with four genera known from freshwater in Ceylon. The material used for this study consists of members of three genera. This study deals with the family Unionidae, the family Corbiculidae is only represented by one specimen.

On the little known species of threadfin breams Nemipterus mesoprion (Bleeker) and Nemipterus delagoae (Smith)

Among the fish species of the family Nemipteridae, the two little known species, namely, Nemipterus mesoprion (Bleeker) and Nemipterus delagoae (Smith) are recorded from the Cochin waters. Nemipterus mesoprion is a new distributional record from the west coast of India. N. delagoae is described with adequate numbers of specimen for the first time from Indian waters. Moreover, the results of the present study show that the colour of the viscera, the number of pyloric caeca and the gill rakers can also be used for the diagnosis of the species of the genus Nemipterus. The affinity of the above species with other related species of the genus Nemipterus and their geographical distribution are presented.

Discriminant analysis for mesh selectivity studies

Discriminant analysis takes into consideration the natural correlation existing between different characteristics of fish when studying mesh selectivity. Some specimen data are presented for two different sets of fish and it is shown that the discriminant analysis shows a significant difference between the two sets where F test failed.

Aspergillus flavus infection of preserved eel (Thysoidea macrurus)

A brief description is given of a preserved specimen of eel (Thysoidea macrurus) infested with Aspergillus flavus. It is suggested that proper washing of the eels is required to remove the slime covering and the specimens should be completely submerged in formalin in order to successfully preserve the eels.

Panulirus versicolor (Latrielle), a new record from the central Andhra coast (Bay of Bengal)

Details are given of the finding of Panulirus versicolor from the central Andhra coast of India for the first time, including also a brief description of the specimen, which was found in 1983.

Isolation of Salmonella agona (4, 12:f, g, 5:-) from commercial frozen boiled clam meat

Details are given of the morphological, biochemical and serological characteristics of a specimen of Salmonella agona isolated from a sample of frozen boiled clam meat (Villorita cyprinoides) processed in a factory at Cochin. Possible association of this serotype with human salmonellosis is considered briefly.

Diversity, abundance distribution and secondary production of intertidal and subtidal benthic macrofauna of Bushehr Province with emphasis on annelida groups

The present investigation was undertaken to establish a reference situation for future use, to identify temporal and spatial composition of macrofauna and estimate some ecological indices in the sub tidal waters along the Bushehr coastal waters in Persian Gulf. Six transects were selected including Genaveh, Farakeh, Shif, Bandargah, Rostami and Asalouyeh, at each transect 3 station were sampled in depths of zero, 5 and 10 metres. Sampling was seasonally carried out by a VAN VEEN grab 0.0225 m2, during summer 2008 until spring 2009. Samples were wet sieved immediately using 0.5 mm mesh size sieves and sediment retained in the sieve was preserved in 4% buffered formalin solution. Macrofauna specimen were separated from the sediments using decantation and elutriation methods, enumerated and identified up to the Genus level. Environmental factors such as temperature. pH, and salinity were recorded in field using sensitive probs and refractometer (for salinity) and also sediment samples were taken for TOM and grain size analysis in all the stations. 5611 specimens belonging to 66 genera were collected during the present study. Polychaetes were dominant both in terms of genus number (31) and relative abundance (74 % of total macrofaunal abundance). The other dominant groups were Artheropoda, (16.1%), Molusca (2.8%), Echinodermata (1.29%) and others including Nematoda, Nemertina, Echiura and Turbellaria (5.8%). Thirty one Genera belong of 27 families of polychaeta, one genus and family of Subphylum Chlicerata,19 genera belong to 14 families of Crustacea, 8 genera belong to 6 families of Molusca, were indentified in the studied region. 1 family (Polygordidae) and 3 genera (Flabeligera, Pilargis and Polygordius) of Polychaeta, 1 family (Nymphonidae) and genus (Nymphon) of Chelicerata, 1 Family (Nematoplanidae) and genus (Nematoplana) of Turbellaria, were identified for the first time in Persian Gulf area. The result indicated that macrofauna organism have strong relationship with the grain size characteristics of the sediments they inhabit. The most surface deposit feeder specimens such as Prionospio and Cossura were found in zero meters depth of Genaveh, Farakeh, Bandargah, Rostami and Asalouyeh stations with sandy substratum, however the most burrowing deposit feeder and scavenger specimens such as Capitella and Petaloproctus were collected in 5 and 10 meter depths of stations with silty–clay substratum. The annual mean abundance, Shanon- weiner diversity and evenness of macrofauna were estimated1152.73 N/ m² , 2.72 and 0.792 respectively .The annual average biomass and secondary production were computed 1.797 gDW m² and 3.594 gDW m² y-1 .The average of water temperature, salinity, pH and oxygen concentration were recorded between 16.37-36.05 °C, 38-42 g/l, 7.89-8.76 and 4.23-8.23 mg/l, respectively during this study in 6 studied region. Among of investigated stations Asalouyeh adjacent of effluent canal of Gas and petrochemical industry sewage and Farakeh regions adjacent the Helleh estuary had the lowets and the highest community indices. The average of diversity and density in 5 meters depth stations with moderate of sand, silt and clay were slightly more than 2 other depths stations, it seems that 5 meters stations are made a transition habitats between 2 sandy and clay habitats, that can be used by 2 groups of surface and borrowing deposit feeders. Based on the data provided in this survey, the temperature variation, sediment texture, TOM, type habitat and manmade factors of Gas and petrochemical industries have had the most effect on the macrofauna community structure in the studied region during sampling periods.

A survey on relation of morphological, molecular and phylogenetic structure of zoanthids of the islands located in the Hormoz Strait (Hormoz, Qeshm, Larak, Hengam)

The order Zoantharia (Zoanthids) is one of the most neglected orders of cnidarians in the Persian Gulf. The present study aims to investigate the biodiversity of this order with morphological and molecular examination in the Persian Gulf. For this purpose, 123 colonies of zoanthids with variety of shape and colors have been collected from intertidal and shallow water zone of four islands, i. e. Hengam, Qeshm, Larak and Hormoz. After sampling, morphological characteristics of each specimen were recorded based on in situ photographs. Then DNA was extracted using the cetyl trimethyl ammonium bromide (CTAB) method. Both mitochondrial 16S ribosomal DNA (mt 16S rDNA) and cytochrome oxidase subunit I (COI) gene fragments were amplified and sequenced. The results of preliminary morphological identification integrated with two mitochondrial markers sequencing demonstrated the presence of five different species in this region; Zoanthus sansibaricus, Palythoa mutuki, Palythoa cf. mutuki, Palythoa tuberculosa and Neozoanthus persicus?. Although at first sight, morphological properties were not successful to delineate zoanthid species, they become reliable criteria to identify and delineate species in field studies after molecular identification.