A Note of Zipf's Law, Natural Languages, and Noncoding DNA Regions

In Phys. Rev. Letters (73:2), Mantegna et al. conclude on the basis of Zipf rank frequency data that noncoding DNA sequence regions are more like natural languages than coding regions. We argue on the contrary that an empirical fit to Zipf"s "law" cannot be used as a criterion for similarity to natural languages. Although DNA is a presumably "organized system of signs" in Mandelbrot"s (1961) sense, and observation of statistical featurs of the sort presented in the Mantegna et al. paper does not shed light on the similarity between DNA's "gramar" and natural language grammars, just as the observation of exact Zipf-like behavior cannot distinguish between the underlying processes of tossing an M-sided die or a finite-state branching process.

The Named-State Register File

This thesis introduces the Named-State Register File, a fine-grain, fully-associative register file. The NSF allows fast context switching between concurrent threads as well as efficient sequential program performance. The NSF holds more live data than conventional register files, and requires less spill and reload traffic to switch between contexts. This thesis demonstrates an implementation of the Named-State Register File and estimates the access time and chip area required for different organizations. Architectural simulations of large sequential and parallel applications show that the NSF can reduce execution time by 9% to 17% compared to alternative register files.