Development and characterization of microsatellite loci of microglanis cottoides (siluriformes: pseudopimelodidae) and cross-species amplification


Autoria(s): Souza-Shibatta, Lenice; Ferreira, Dhiego Gomes; Oliveira, Claudio; Almeida, Fernanda Simoes de; Shibatta, Oscar Akio; Sofia, Silvia Helena
Contribuinte(s)

Universidade Estadual Paulista (UNESP)

Data(s)

03/12/2014

03/12/2014

30/06/2013

Resumo

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Thirteen microsatellite loci were isolated and characterized in Microglanis cottoides. Of these, two were monomorphic and 11 were polymorphic. These polymorphic loci tested on 24 individuals from a wild population produced a total of 108 different alleles, with levels of variability high, ranging from 2 to 20, with an average of 8.3 alleles per locus. The observed and expected heterozygosity ranged from 0.125 to 0.958 and from 0.119 to 0.931, respectively. A high combined probability of paternity exclusion value and a low probability combined genetic identity value obtained show that the set of loci described herein displays good suitability for paternity studies and differentiation of M. cottoides. Additionally, all thirteen microsatellite primers developed for M. cottoides were tested in four other Pseudopimelodidae species and successful cross-species amplification was achieved for the majority of loci.

Formato

581-585

Identificador

http://dx.doi.org/10.1590/S1679-62252013000300011

Neotropical Ichthyology. São Paulo: Soc Brasileira Ictiologia, v. 11, n. 3, p. 581-585, 2013.

1679-6225

http://hdl.handle.net/11449/111500

WOS:000326973700011

S1679-62252013000300011.pdf

Idioma(s)

eng

Publicador

Soc Brasileira Ictiologia

Relação

Neotropical Ichthyology

Direitos

openAccess

Palavras-Chave #Brazilian Eastern basin #Catfish #Enriched genomic library #Genetic marker #SSR
Tipo

info:eu-repo/semantics/article