NEW MICROSATELLITE LOCI FOR WATER YAM (DIOSCOREA ALATA, DIOSCOREACEAE) AND CROSS-AMPLIFICATION FOR OTHER DIOSCOREA SPECIES
Contribuinte(s) |
UNIVERSIDADE DE SÃO PAULO |
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Data(s) |
17/04/2012
17/04/2012
2011
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Resumo |
Premise of the study: Dioscorea alata L. is one of the most widely distributed species of the genus in the humid and semihumid tropics and is associated with traditional agriculture. Only a few microsatellite markers have been developed so far for this and other Dioscorea species. Methods and Results: We isolated 14 codominant polymorphic microsatellite markers using a microsatellite-enriched genomic library technique. Ten microsatellite loci were selected, and 80 D. alata accessions from different regions in Brazil were evaluated with nine polymorphic loci. The polymorphism information content (PIC) varied from 0.39 to 0.78 and the power discrimination (PD) ranged from 0.15 to 0.91. Six of the markers showed transferability for the species D. bulbifera, D. cayenensis-D. rotundata, and D. trifida. Conclusions: The SSR markers obtained are an important tool for further studies aiming to characterize the genetic diversity in D. alata and other Dioscorea spp. accessions. FAPESP (Fundacao de Amparo a Pesquisa do Estado de Sao Paulo) CAPES (Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior), Brazil |
Identificador |
AMERICAN JOURNAL OF BOTANY, v.98, n.6, p.E144-E146, 2011 0002-9122 http://producao.usp.br/handle/BDPI/14770 10.3732/ajb.1000513 |
Idioma(s) |
eng |
Publicador |
BOTANICAL SOC AMER INC |
Relação |
American Journal of Botany |
Direitos |
openAccess Copyright BOTANICAL SOC AMER INC |
Palavras-Chave | #Dioscorea alata #genetic diversity #SSR #transferability #tuber crop #yam #DNA #MARKERS #SP. #Plant Sciences |
Tipo |
article original article publishedVersion |