NEW MICROSATELLITE LOCI FOR WATER YAM (DIOSCOREA ALATA, DIOSCOREACEAE) AND CROSS-AMPLIFICATION FOR OTHER DIOSCOREA SPECIES


Autoria(s): SIQUEIRA, Marcos V. B. M.; MARCONI, Thiago G.; BONATELLI, Maria L.; ZUCCHI, Maria I.; VEASEY, Elizabeth A.
Contribuinte(s)

UNIVERSIDADE DE SÃO PAULO

Data(s)

17/04/2012

17/04/2012

2011

Resumo

Premise of the study: Dioscorea alata L. is one of the most widely distributed species of the genus in the humid and semihumid tropics and is associated with traditional agriculture. Only a few microsatellite markers have been developed so far for this and other Dioscorea species. Methods and Results: We isolated 14 codominant polymorphic microsatellite markers using a microsatellite-enriched genomic library technique. Ten microsatellite loci were selected, and 80 D. alata accessions from different regions in Brazil were evaluated with nine polymorphic loci. The polymorphism information content (PIC) varied from 0.39 to 0.78 and the power discrimination (PD) ranged from 0.15 to 0.91. Six of the markers showed transferability for the species D. bulbifera, D. cayenensis-D. rotundata, and D. trifida. Conclusions: The SSR markers obtained are an important tool for further studies aiming to characterize the genetic diversity in D. alata and other Dioscorea spp. accessions.

FAPESP (Fundacao de Amparo a Pesquisa do Estado de Sao Paulo)

CAPES (Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior), Brazil

Identificador

AMERICAN JOURNAL OF BOTANY, v.98, n.6, p.E144-E146, 2011

0002-9122

http://producao.usp.br/handle/BDPI/14770

10.3732/ajb.1000513

http://dx.doi.org/10.3732/ajb.1000513

Idioma(s)

eng

Publicador

BOTANICAL SOC AMER INC

Relação

American Journal of Botany

Direitos

openAccess

Copyright BOTANICAL SOC AMER INC

Palavras-Chave #Dioscorea alata #genetic diversity #SSR #transferability #tuber crop #yam #DNA #MARKERS #SP. #Plant Sciences
Tipo

article

original article

publishedVersion