Diversité des organismes endophytes dans les racines de plantes poussant en milieu contaminé en hydrocarbures

Les champignons endophytes sont des organismes qui vivent à l’intérieur de plantes sans causer de symptômes de maladie apparents. Ils sont trouvés dans virtuellement toutes plante, et la nature des interactions peut aller de mutualiste à pathogène dépendant des conditions. La diversité et la structure des communautés des champignons endophytes dans les plantes poussant en milieu extrêmement pollué, ainsi que leur rôle potentiel pour améliorer la phytorémédiation, demeurent peu compris. Dans cette étude, nous nous sommes intéressés aux communautés de champignons endophytes de racines de deux espèces de plantes (Eleocharis erythropoda et Populus sp.). Ces espèces poussaient de manière spontanée dans trois bassins de sédimentation d’un ancienne usine pétro-chimique ayant des niveaux de contaminations différents, en utilisant à la fois une approche d’isolation d’organisme ainsi que des analyses de pyroséquençage de l’ITS d’ADN ribosomal. Nos résultats indiquent que les niveaux de contamination ont un effet significatif sur la composition taxonomique des champignons endophytes des racines de E. erythropoda. Une majorité des données de séquences appartiennent à la classe des Dothideomycetes dans les échantillons de forte concentration en hydrocarbures pétroliers, dont une majorité appartient au genre Alternaria. La comparaison des données d’isolation et de pyroséquençage suggère que l’isolation de souches ne permet pas l’obtention des souches les plus représentées dans les données de pyroséquençage. Ces résultats pourront potentiellement aider à l’élaboration de stratégies pour améliorer la phytorémédiation en utilisant les champignons endophytes.

O Gênero Eleocharis R.Br. (Cyperaceae) no Rio Grande do Sul, Brasil

O estudo taxonômico do gênero Eleocharis R. Br. para o Rio Grande do Sul foi desenvolvido através dos métodos tradicionais em taxonomia. Os dados foram obtidos através da bibliografia, revisão de herbários regionais e coleta de exemplares a campo. O gênero está representado no Rio Grande do Sul por 27 espécies: Eleocharis acutangula (Roxb.) Schult., E. bonariensis Nees, E. contracta Maury, E. dunensis Kük., E. elegans (Kunth) Roem. & Schult., E. filiculmis Kunth, E. flavescens (Poir.) Urb., E. geniculata (L.) Roem. & Schult., E. interstincta (Vahl) Roem. & Schult., E. loefgreniana Boeck., E. maculosa (Vahl) Roem. & Schult., E. minima Kunth var. minima, E. montana (Kunth) Roem. & Schult., E. montevidensis Kunth, E. nudipes (Kunth) Palla, E. obtusetrigona (Lindl. & Nees) Steud., E. ochrostachys Steud., E. parodii Barros, E. aff. quinquangularis, E. quinquangularis Boeck., E. rabenii Boeck., E. radicans (Poir.) Kunth, E. sellowiana Kunth, E. squamigera Svenson, E. subarticulata (Nees) Boeck., E. viridans Kük. e Eleocharis sp. O trabalho apresenta descrições, ilustrações, dados sobre distribuição geográfica, habitat e períodos de floração e frutificação das espécies, além de uma chave dicotômica para diferenciá-las.

Karyotypic diversification and its contribution to the taxonomy of Eleocharis (Cyperaceae) from Brazil

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Distribution of 45S and 5S rDNA sites in 23 species of Eleocharis (Cyperaceae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Phylogenetic Relationships in Eleocharis (Cyperaceae): C-4 Photosynthesis Origins and Patterns of Diversification in the Spikerushes

Eleocharis (Cyperaceae) is a morphologically and physiologically diverse lineage of 250 + species with a cosmopolitan distribution. We here explore phylogenetic relationships in this lineage using maximum parsimony and Bayesian inference analyses of nrDNA ITS and cpDNA trnC-ycf6 and ycf6-psbM sequence data with the goals of comparing our phylogenetic hypotheses to previous classifications, morphological variation, and photosynthetic pathway variation. Our results suggest that in Eleocharis C, photosynthesis has been derived at least three times, with several cases of possible reversion to C-3-like or intermediate pathways and several additional origins of C-3-C-4 intermediate photosynthetic pathways, as inferred by carbon isotope ratio measurements. Many classification units currently recognized in Eleocharis are not monophyletic, however, E. subgenus Limnochloa and E. subgenus Scirpidium are monophyletic. Other classification units largely corresponding to clades include E. subgenus Zinserlingia, E. subseries Chaetariae, and E. series Maculosae. Problems with species circumscription and morphological variation in several groups are discussed in light of the phylogeny, particularly in the context of species membership of seven focal clades found in the analyses.

Cytogenetical and cytotaxonomical analysis of some Brazilian species of Eleocharis (Cyperaceae)

Karyotype analysis of 21 samples of 11 species of Eleocharis ( Cyperaceae) from 10 localities in Brazil, showed the presence of chromosomes without primary constrictions and parallel movement of chromatids at metaphase-anaphase transition. Only the terminal nucleolar constrictions ( satellites) were visualised. The chromosome numbers varied from 2n=6 in E. subarticulata to 2n=54 in E. acutangula, but the chromosome basic number x=5 was confirmed. Generally, C-CMA(3)(+) bands appear mostly in the extremities of the chromosomes, associated to NOR, and interstitial C-CMA(3) bands were found only in E. geniculata and E. acutangula. C-DAPI(+) bands were not found. Fluorescence in situ hybridisation ( FISH) with the 45S rDNA probe was performed in five species. The results showed from four to eight hybridisation signals, always terminal. The analysed species include representatives of the following three subgenera of Eleocharis that occur in Brazil: Limnochloa, Scirpidium and Eleocharis. Species from the subgenus Limnochloa have small and numerous chromosomes. The remaining species, belonging to subgenera Eleocharis and Scirpidium, possess fewer and larger chromosomes. In subgenus Eleocharis, karyotypes of the section Eleocharis were differentiated by symploidy, agmatoploidy and polyploidy, whereas species of the section Eleogenus were all polyploids. Polyploidy seems to be the most frequent event in the karyotype differentiation in Eleocharis, but changes in the chromosome size and repetitive DNA sites were also observed.

Chromosome reduction in Eleocharis maculosa (Cyperaceae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Estudo citogenético e evolutivo em espécies brasileiras de Eleocharis (Cyperaceae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Shoot architecture and growth in the south Florida wet prairie macrophyte, Eleocharis cellulosa

Eleocharis cellulosa is a dominant macrophyte in Everglades wet prairie communities. The development of the shoot system in the genus has been described as sympodial but with an unusual adnation of the horizontal and vertical shoots. The growth pattern of E. cellulosa was studied from field collected plants and plants grown in the greenhouse. Plants were extracted and measurements of horizontal and vertical shoot were taken. Dissections, paraffin sectioning and SEM's were used to examine shoot structure in early developmental stages. E. cellulosa was transplanted from the field to the greenhouse and different levels of Nitrogen and Phosphorus were added to determine how it responded phenotypically. Dissections and microscopy showed that growth of the vertical shoots of E. cellulosa is sympodial, while growth of the horizontal shoots is mixed, beginning monopodially then transforming to sympodial growth. Additions of nutrients did not have any effect on the morphology of E. cellulosa.

Littoral vegetation of Lake Tohopekaliga: community descriptions prior to a large-scale fisheries habitat-enhancement project

An extreme dry-down and muck-removal project was conducted at Lake Tohopekaliga, Florida, in 2003-2004, to remove dense vegetation from inshore areas and improve habitat degraded by stabilized water levels. Vegetation was monitored from June 2002 to December 2003, to describe the pre-existing communities in terms of composition and distribution along the environmental gradients. Three study areas (Treatment-Selection Sites) were designed to test the efficacy of different treatments in enhancing inshore habitat, and five other study areas (Whole-Lake Monitoring Sites) were designed to monitor the responses of the emergent littoral vegetation as a whole. Five general community types were identified within the study areas by recording aboveground biomasses and stem densities of each species. These communities were distributed along water and soils gradients, with water depth and bulk density explaining most of the variation. The shallowest depths were dominated by a combination of Eleocharis spp., Luziola fluitans, and Panicum repens; while the deeper areas had communities of Nymphaea odorata and Nuphar luteum; Typha spp.; or Paspalidium geminatum and Hydrilla verticillata. Mineralized soils were common in both the shallow and deep-water communities, while the intermediate depths had high percentages of organic material in the soil. These intermediate depths (occurring just above and just below low pool stage) were dominated by Pontederia cordata, the main species targeted by the habitat enhancement project. This emergent community occurred in nearly monocultural bands around the lake (from roughly 60–120 cm in depth at high pool stage) often having more diverse floating mats along the deep-water edge. The organic barrier these mats create is believed to impede access of sport fish to shallow-water spawning areas, while the overall low diversity of the community is evidence of its competitive nature in stabilized waters. With continued monitoring of these study areas long-term effects of the restoration project can be assessed and predictive models may be created to determine the efficacy and legitimacy of such projects in the future.

Adaptações morfoanatômicas de Cyperaceae ao ambiente aquático

No ecossistema aquático há uma faixa de umidade gradiente no solo que interfere diretamente na ocupação das espécies à margem da lâmina de água. Essa zonação ecológica reflete os graus de adaptação que as plantas apresentam para tolerar o alagamento ou a dessecação. O presente trabalho visou apresentar a análise morfoanatômica de cinco espécies de Cyperaceae encontradas em diferentes zonas no entorno da represa Alagados, em Ponta Grossa-PR, Brasil: Cyperus giganteus, Rhynchospora corymbosa var. aspérula, Cyperus densicaespitosus, Cyperus rigens e Eleocharis sp. Estruturas caulinares e foliares das cinco espécies de Cyperaceae foram analisadas a partir de cortes histológicos. Concluiu-se que, das cinco plantas analisadas, somente três caracterizam-se como plantas aquáticas, sendo duas classificadas como plantas emergentes e uma como submersa fixa devido às características adaptativas que apresentam para obter sucesso nesse ambiente.

Levantamento da infestação de plantas aquáticas em Porto Primavera antes do enchimento final do reservatório

O objetivo deste trabalho foi identificar as plantas aquáticas e os níveis de infestação de cada espécie em Porto Primavera antes do enchimento final do reservatório. Foram avaliados todos os focos de vegetação aquática no reservatório (72 pontos), sendo os pontos demarcados com um aparelho de GPS. As espécies foram identificadas e estimouse visualmente (tamanho da área) a distribuição proporcional das plantas no foco de infestação. Após a identificação, foram encontradas 18 espécies de plantas aquáticas vegetando no reservatório, das quais foram determinadas a frequência de espécie de planta aquática e a distribuição dentro do sistema de geração de energia. As espécies encontradas no reservatório foram: Eichhornia crassipes, Eichhornia azurea, Pistia stratiotes, Paspalum repens, Cyperus brevifolius, Paspalum conspersum, Echinochloa polystachya, Egeria densa, Egeria najas, Polygonum hidropiperoides, Polygonum lapathifolium, Alternanthera philoxeroides, Eleocharis sellowiana, Nymphaea ampla, Pontederia cordata, Salvinia auriculata, Salvinia rotundifolia e Typha angustifolia. As maiores frequências relativas foram observadas em: E. azurea (36,11%), E. crassipes (16,67%), P. stratiotes (13,89%), S. auriculata (13,89%), C. brevifolius (11,11%) e P. lapathifolium (6,94%).

Anatomical features of species of Cyperaceae from northeastern Brazil

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Estudos anatômicos de Cyperaceae (Poales) com ênfase na anatomia Kranz

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)