大尺度环境梯度上羊草种群适应性研究

　　由于全球气候变化，干旱化问题已经成为制约植物生存、影响农作物产量的主要环境因子，因此有关植物在大尺度环境梯度上对环境因子变化的适应性研究已经成为生态学研究的热点。目前环境变化对植被生产力的影响已经有了广泛研究，但是关于植物在形态解剖和渗透调节等生理特征上对大尺环境梯度变化的适应机制研究报道却很少。本研究以北纬43°16′-44°36′；东经125°17′-115°43′范围内的羊草草地为研究对象，探讨羊草主要形态解剖特征、生理渗透调节特征等的变化规律及其与环境因子的关系，以期揭示大尺度环境梯度上羊草种群对环境变化的响应规律和适应策略。本研究的主要结果如下： 在大尺度环境梯度下，羊草种群的气孔密度和气孔指数表现出非常相似的变化趋势，均为由东向西呈先降后升的变化趋势，且与降水等因子的相关关系为V型二次曲线。这是因为气孔的蒸腾作用是植物散失水分的主要途径，同时蒸腾作用产生的蒸腾拉力是植物根部吸收水分的主要动力，因此这种V型曲线正是它在野外对如何调节体内失水和吸水的一种权衡的结果。由于羊草叶片的营养生长和器官建成主要在7月份，这也导致了该月的平均降水对气孔密度和气孔指数有很重要的影响作用。 在该梯度下，羊草叶片厚度和LMA（Leaf mass per unit area, 单位面积叶重）等形态性状指标、叶片解剖学特征等表现出有规律的变化趋势。具体表现为从东向西随着气候由湿润到干旱的变化，叶片厚度、LMA呈增加趋势；同样维管束、木质部及导管直径和叶片厚度等变化趋势相似，从东向西逐渐增加,它们均与七月份温度显著相关。这说明外界环境变化对羊草的形态性状和解剖特征等产生了显著的影响，而且羊草也会通过改变形态解剖特征等来适应大尺度环境梯度变化。 在本研究中，羊草叶片脯氨酸和可溶糖份含量等生理指标也随着环境梯度的变化呈现出明显的规律变化，主要表现为由东至西随降水量的减少而逐渐增加；叶片钠离子和钾离子含量虽然有一定变化，但是它们与气候因子变化并不一致，而分别与土壤里钠离子和钾离子含量呈显著的相关关系。这说明自东向西随着干旱程度的增加，脯氨酸和可溶糖份含量对羊草适应环境变化起着主要的渗透调节作用。 自然条件下，羊草主要有两种生态型，根据叶片颜色的差异分别为灰绿型(GG)和黄绿型(YG)。它们在分布上也表现出很大的差异，其中灰绿型羊草分布范围更广，且更耐盐碱。我们分别选取查干花和绍根两个样点镶嵌生长的两种生态型羊草，对它们的叶片形态解剖特征和渗透调节特征进行比较。结果显示无论是在查干花还是绍根地区，在同一生境条件下，黄绿型羊草叶片厚度、LMA、及维管束直径、木质部直径和导管直径等均比灰绿型高，而气孔密度和气孔指数比灰绿型低，在形态上表现出明显的旱生化特征。而灰绿型羊草叶片则有较高的脯氨酸含量、可溶糖份含量及钾离子含量，较低的钠离子含量，表现出较强的渗透调节能力、更强的选择性排钠离子和吸收钾离子的能力。为此我们推断在相同生境下两种生态型羊草在应对干旱和盐碱胁迫时在形态和生理上采取不同的适应策略，而且这两种策略是互相补充，这就解释了两种生态型羊草能够镶嵌生长的现象。

Comparative molecular population genetics of phycoerythrin locus in Prochlorococcus

As the only remainder type of phycobiliproteins in Prochlorococcus, the actual role of phycoerythrin still remains unknown. Previous studies revealed that two different forms of phycoerythrin gene were found in two ecotypes of Prochlorococcus that are specifically adapted to either high light (HL) or low light (LL) conditions. Here we analyze patterns of phycoerythrin nucleotide variation in the HL- and LL-Prochlorococcus populations. Our analyses reveal a significantly greater number of non-synonymous fixed substitutions in peB and peA than expected based on interspecific comparisons. This pattern of excess non-synonymous fixed substitutions is not seen in other five phycoerythrin-related genes (peZ/V/Y/T/S). Several neutrality statistical tests indicate an excess of rare frequency polymorphisms in the LL-Prochlorococcus data, but an excess of intermediate frequency polymorphisms in the HL-Prochlorococcus data. Distributions of the positively selected sites identified using the likelihood ratio test, when mapped onto the phycoerythrin tertiary structure, reveal that HL- and LL-phycoerythrin should be under different selective patterns. These findings may provide insights into the likely role of selection at the phycoerythrin locus and motivate further research to unveil the function of phycoerythrin in Prochlorococcus.

Rhodopsin gene polymorphism associated with divergent light environments in atlantic cod

The spectral sensitivity of visual pigments in vertebrate eyes is optimized for specific light conditions. One of such pigments, rhodopsin (RH1), mediates dim-light vision. Amino acid replacements at tuning sites may alter spectral sensitivity, providing a mechanism to adapt to ambient light conditions and depth of habitat in fish. Here we present a first investigation of RH1 gene polymorphism among two ecotypes of Atlantic cod in Icelandic waters, which experience divergent light environments throughout the year due to alternative foraging behaviour. We identified one synonymous single nucleotide polymorphism (SNP) in the RH1 protein coding region and one in the 3' untranslated region (3'-UTR) that are strongly divergent between these two ecotypes. Moreover, these polymorphisms coincided with the well-known panthophysin (Pan I) polymorphism that differentiates coastal and frontal (migratory) populations of Atlantic cod. While the RH1 SNPs do not provide direct inference for a specific molecular mechanism, their association with this dim-sensitive pigment indicates the involvement of the visual system in local adaptation of Atlantic cod.

Outlier Loci Detect Intraspecific Biodiversity amongst Spring and Autumn Spawning Herring across Local Scales

Herring, Clupea harengus, is one of the ecologically and commercially most important species in European northern seas, where two distinct ecotypes have been described based on spawning time; spring and autumn. To date, it is unknown if these spring and autumn spawning herring constitute genetically distinct units. We assessed levels of genetic divergence between spring and autumn spawning herring in the Baltic Sea using two types of DNA markers, microsatellites and Single Nucleotide Polymorphisms, and compared the results with data for autumn spawning North Sea herring. Temporally replicated analyses reveal clear genetic differences between ecotypes and hence support reproductive isolation. Loci showing non-neutral behaviour, so-called outlier loci, show convergence between autumn spawning herring from demographically disjoint populations, potentially reflecting selective processes associated with autumn spawning ecotypes. The abundance and
exploitation of the two ecotypes have varied strongly over space and time in the Baltic Sea, where autumn spawners have faced strong depression for decades. The results therefore have practical implications by highlighting the need for specific management of these co-occurring ecotypes to meet requirements for sustainable exploitation and ensure optimal livelihood for coastal communities.

Taxonomic status of the genus Sotalia: Species level ranking for tucuxi (Sotalia fluviatilis) and costero (Sotalia guianensis) dolphins

Dolphins of the genus Sotalia are found along the Caribbean and Atlantic coasts of Central and South America and in the Amazon River and most of its tributaries. At present, the taxonomy of these dolphins remains unresolved. Although five species were described in the late 1800s, only one species is recognized currently (Sotalia fluviatilis) with two ecotypes or subspecies, the coastal subspecies (Sotalia fluviatilis guianensis) and the riverine subspecies (Sotalia fluviatilis fluviatilis). Recent morphometric analyses, as well as mitochondrial DNA analysis, suggested recognition of each subspecies as separate species. Here we review the history of the classification of this genus and present new genetic evidence from ten nuclear and three mitochondrial genes supporting the elevation of each subspecies to the species level under the Genealogical/Lineage Concordance Species Concept and the criterion of irreversible divergence. We also review additional evidence for this taxonomic revision from previously published and unpublished genetic, morphological, and ecological studies. We propose the common name costero for the coastal species, Sotalia guianensis (Van Beneden 1864), and accept the previously proposed tucuxi dolphin, Sotalia fluviatilis (Gervais, 1853), for the riverine species.

Rapid divergence of ecotypes of an invasive plant

Invasive species demonstrate rapid evolution within a very short period of time allowing one to understand the underlying mechanism(s). Lantana camara, a highly invasive plant of the tropics and subtropics, has expanded its range and successfully established itself almost throughout India. In order to uncover the processes governing the invasion dynamics, 218 individuals from various locations across India were characterized with six microsatellites. By integrating genetic data with niche modelling, we examined the effect of drift and environmental selection on genetic divergence. We found multiple genetic clusters that were non-randomly distributed across space. Spatial autocorrelation revealed a strong fine-scale structure, i.e. isolation by distance. In addition, we obtained evidence of inhibitory effects of selection on gene flow, i.e. isolation by environmental distance. Perhaps, local adaptation in response to selection is offsetting gene flow and causing the populations to diverge. Niche models suggested that temperature and precipitation play a major role in the observed spatial distribution of this plant. Based on a non-random distribution of clusters, unequal gene flow among them and different bioclimatic niche requirements, we concluded that the emergence of ecotypes represented by two genetic clusters is underway. They may be locally adapted to specific climatic conditions, and perhaps at the very early stages of ecological divergence.

Temperature tolerance of young sporophytes from two populations of Laminaria japonica revealed by chlorophyll fluorescence measurements and short-term growth and survival performances in tank culture

The cold-water subtidal brown alga Laminaria japonica has been commercially fanned in the Far East and has been on top of all marine-fanned species in terms of farming area and annual output worldwide. The successful trials of transplantation of young sporophytes from the north to the south in winter along the Chinese coast in the 1950s led to the spreading of cultivation activities down to a latitude of 25-26 degrees N. Up to today, nearly 50% of the annual output of this farmed alga, as a cold-water species, comes from the sub-tropical south in China. The demand to have high-temperature-tolerant strains/ecotypes in farming area calls for a practical method to judge and select the desired parental plants for breeding programs and for seedling production. In this paper, we report our results on using chlorophyll fluorescence measurement and short-term growth performance in tank culture to estimate the temperature tolerance of offspring from two populations, Fujian Farmed Population (FFP) sampled from Fujian province (latitude: 25-26 degrees N) in subtropical area and Qingdao Wild Population (QWP) sampled from Qingdao (latitude: 36 degrees N). Contrary to what has been usually thought, the results revealed that offspring from Qingdao wild population in the north showed better performance both in short-term growth and survival rates and in optimal quantum efficiency (F-v/F-m) when exposed to higher temperature (20-25 degrees C). This result was further confirmed by fluorescence quenching analysis. QWP distributed along the southern distribution limit at a latitude of 36 degrees N in the Pacific west coast is thus taken as a more ideal one than the fanned population in subtropical region as a source of parental plants for breeding high-temperature-tolerant varieties. (c) 2006 Elsevier B.V. All rights reserved.

Intergenomic epistasis causes asynchronous hatch times in whitefish hybrids, but only when parental ecotypes differ

Support for the theory of ecological speciation requires evidence for ecological divergence between species which directly or indirectly causes reproductive isolation. This study investigates effects of ecological vs. genetic disparity of parental species on the presence of endogenous selection (deformation and mortality rates) and potential sources of exogenous selection (growth rates and hatch timing) on hybrids. Hybrid embryonic development is analysed in a common-garden full-sib cross of three species belonging to two different ecotypes within the Coregonus lavaretus species flock in the central Alpine region of Europe. Although hatch timing was similar across the three species, embryonic growth rates and egg sizes differed between ecotypes. This led to a mismatch between embryonic growth rate and egg size in hybrid crosses that reveals epistasis between the maternal and embryonic genomes and transgressive hatch times that were asynchronous with control crosses. A strong constraint of egg size to embryo size at late development was also evident. We argue that this demonstrates potential for coadaptation of a maternal trait (egg size) with offspring growth rate to be an important source of selection against hybridization between ecotypes with different egg sizes. Implications for the measurement and quantification of early life-history traits affected by this additive relationship, such as hatch day and larval size, are also discussed.

Competition may explain the fine-scale spatial patterns and genetic structure of two co-occurring plant congeners

1. The spatial distribution of individual plants within a population and the population’s genetic structure are determined by several factors, like dispersal, reproduction mode or biotic interactions. The role of interspecific interactions in shaping the spatial genetic structure of plant populations remains largely unknown. 2. Species with a common evolutionary history are known to interact more closely with each other than unrelated species due to the greater number of traits they share. We hypothesize that plant interactions may shape the fine genetic structure of closely related congeners. 3. We used spatial statistics (georeferenced design) and molecular techniques (ISSR markers) to understand how two closely related congeners, Thymus vulgaris (widespread species) and T. loscosii (narrow endemic) interact at the local scale. Specific cover, number of individuals of both study species and several community attributes were measured in a 10 × 10 m plot. 4. Both species showed similar levels of genetic variation, but differed in their spatial genetic structure. Thymus vulgaris showed spatial aggregation but no spatial genetic structure, while T. loscosii showed spatial genetic structure (positive genetic autocorrelation) at short distances. The spatial pattern of T. vulgaris’ cover showed significant dissociation with that of T. loscosii. The same was true between the spatial patterns of the cover of T. vulgaris and the abundance of T. loscosii and between the abundance of each species. Most importantly, we found a correlation between the genetic structure of T. loscosii and the abundance of T. vulgaris: T. loscosii plants were genetically more similar when they were surrounded by a similar number of T. vulgaris plants. 5. Synthesis. Our results reveal spatially complex genetic structures of both congeners at small spatial scales. The negative association among the spatial patterns of the two species and the genetic structure found for T. loscosii in relation to the abundance of T. vulgaris indicate that competition between the two species may account for the presence of adapted ecotypes of T. loscosii to the abundance of a competing congeneric species. This suggests that the presence and abundance of close congeners can influence the genetic spatial structure of plant species at fine scales.

Portuguese ecotypes of Opuntia ficus-indica differ in biomass production

The Opuntia ficus-indica (L.) Miller is a species from the Cactaceae family with the center of origin and domestication in central Mexico. This species introduction in the Iberia Peninsula occurred, probably, by the end of the 15th century, after the discovery of America, spreading later throughout the Mediterranean basin. In Portugal, O. ficus-indica is located, usually, with a typical ruderal behavior, at the edge of roads and paths. In Portugal, as in other Mediterranean regions, inlands areas are under severe draught during extensive summers, in particular, and global warming is expected to affect them deeply in the near future. O. ficus-indica, by its morpho-physiological characteristics and multiple economic uses, represent an alternative crop for those regions. Sixteen Portuguese O. ficus indica ecotypes and two ‘Italian’ cultivars ("Gialla" and "Bianca") were evaluated for plant vigor and biomass production, by nondestructive methods, in the two years following planting. Biomass production and plant vigor were measured by estimating cladode number, cladode area and fresh weight per plant. Linear models to predict the area of cladodes and fresh weight per plant were previously established using a biometric analysis of 180 cladodes. It was not possible to establish an accurate linear model for dry matter using non-destructive estimation. Significant differences were found among populations in the studied biomass-related parameters, and different groups were unfolded. A group of four Portuguese ecotypes outperformed in terms of biomass production, comparable with the “Gialla” cultivar. This group could be used to start a breeding program with the objective of deploy material for animal feeding, biomass and fruit production. Nevertheless, the ‘Gialla’ cultivar showed the best performance, achieving the highest biomass related parameters, not surprisingly for it is an improved plant material.