EVOLUTION OF DISPARITY BETWEEN THE REGULAR AND VARIANT PHLOEM IN BIGNONIEAE (BIGNONIACEAE)

Premise of the study: The phloem is a plant tissue with a critical role in plant nutrition and signaling. However, little is still known about the evolution of this tissue. In lianas of the Bignoniaceae, two distinct types of phloem coexist: a regular and a variant phloem. The cells associated with these two phloem types are known to be anatomically different; however, it is still unclear what steps were involved in the evolution of such differences. Methods: Here we studied the anatomical development of the regular and variant phloem in representatives of all 21 genera of Bignonieae and used a phylogenetic framework to investigate the timing of changes associated with the evolution of each phloem type. Key results: We found that the variant phloem always appears in a determinate location, between the leaf orthostichies. Furthermore, the variant phloem was mostly occupied by very wide sieve tubes and generally included a higher concentration of fibers, indicating an increase in conduction and mechanical support. On the other hand, the regular phloem included much more parenchyma, more and wider rays, and tiny sieve tubes that resembled terminal sieve tubes from plants with seasonal formation of vascular tissues; these findings suggest reduced conduction and higher storage capacity in the regular phloem. Conclusions: Overall, differences between the regular and variant phloem increased over time, leading to further specialization in conduction in the variant phloem and an increase in storage specialization in the regular phloem.

Lianas and soil nutrients predict fine-scale distribution of above-ground biomass in a tropical moist forest

Acknowledgements. This study was supported by the FP7-PEOPLE-2013-IEF Marie-Curie Action – SPATFOREST. Tree data from BCI were provided by the Center for Tropical Forest Science of the Smithsonian Tropical Research Institute and the primary granting agencies that have supported the BCI plot tree census. Data for the liana censuses were supported by the US National Science Foundation grants: DEB-0613666, DEB-0845071, and DEB-1019436 (to SAS). Soil data was funded by the National Science Foundation grants DEB021104, DEB021115, DEB0212284 and DEB0212818 supporting soils mapping in the BCI plot. We thank Helene Muller-Landau for providing some data on tree height for some BCI trees. We also thank all the people that contributed to obtain the data.

Lianas da estação ecológica do Noroeste Paulista, São José do Rio Preto/Mirassol, SP, Brasil

Lianas are characteristic, abundant and ecologically important members of tropical forest but they have been neglected in floristics and phytossociological studies. This work presents a floristic survey of the lianas species at Estação Ecológica do Noroeste Paulista (EENP), and a comparison of the list of species recorded in this work with those reported for other fragments of São Paulo state. The EENP (20º48'36'' S and 49º22'50'' W) is at 468 m of altitude and comprises an area of 168,43 ha, divided into three fragments of vegetation. Samples of lianas were collected in the interior and along the edges of the forest fragments. It was identified 105 species: 99 Magnoliopsida (60 genera and 22 families); six Liliopsida (three genera and three families). The richest families in species comprised 59% of the total of lianas sampled. The dendrogram of similarity showed a low similarity between the forest situated in the littoral (Atlantic Forest) and those located in the interior of the state of São Paulo. Some other authors, also analysing the similarity of forest of the interior and Atlantic Forest of São Paulo state, but considering only the trees reported similar result.

Contribuição das folhas de lianas na produção de serapilheira em um fragmento de floresta estacional semidecidual em São Carlos, SP

A produção de serapilheira em um fragmento de floresta estacional semidecidual foi analisada durante 12 meses, sendo o material recolhido separado em frações de: galhos, material reprodutivo, folhas de espécies de lianas e folhas de demais espécies. O total de material produzido foi de 12.221 kg ha-1 ano-1, sem diferença significativa entre os meses observados e sem relação significativa também com o período seco. A fração das folhas teve a maior contribuição com 7.750 kg ha-1 ano-1, da qual 2.317 kg ha-1 ano-1 (19%), correspondem às folhas de lianas, que apresentam ampla distribuição no fragmento. A maioria das lianas contudo, não apresentaram deciduidade marcante como ocorre com algumas espécies arbóreas desse tipo florestal. A produção de folhas de lianas para a serapilheira é constante, porém uma maior queda foi relacionada com a alta evapotranspiração real ocorrida no período de estudo.

Seasonality and growth rings in lianas of Bignoniaceae

Lianas are one of the most important components of tropical forest, and yet one of the most poorly known organisms. Therefore, our paper addresses questions on the environmental and developmental aspects that influence the growth of lianas of Bignoniaceae, tribe Bignonieae. In order to better understand their growth, we studied the stem anatomy, seasonality of formation and differentiation of secondary tissues, and the influence of the cambial variant in xylem development on a selected species: Tynanthus cognatus. Afterwards, we compared the results found in T. cognatus with 31 other species of Bignonieae to identify general patterns of growth in lianas of this tribe. We found that cambial activity starts toward the end of the rainy season and onset of the dry season, in contrast to what is known for tropical trees and shrubs. Moreover, their pattern of xylem formation and differentiation is strongly influenced by the presence of massive wedges of phloem produced by a variant cambium. Thus, the variant cambium is the first to commence its activity and only subsequently does cambial activity progress towards the center of the regular region, leading to the formation of confluent growth rings. In summary, we conclude that: the cambium responds to environmental changes; the xylem growth rings are annual and produced in a brief period of about 2 months, something that may explain why lianas possess narrow stems; and furthermore, phloem wedges greatly influence cambial activity.

Variation in liana abundance and biomass along an elevational gradient in the tropical Atlantic Forest (Brazil)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Lianas de uma floresta estacional semidecidual, Município de Paulo de Faria, Norte do Estado de São Paulo, Brasil

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Lianas da estação ecológica do Noroeste Paulista, São José do Rio Preto/Mirassol, SP, Brasil

Lianas são membros característicos das florestas tropicais, onde são abundantes e de grande importância ecológica. Entretanto, têm sido negligenciadas em estudos florísticos e fitossociológicos. Este trabalho apresenta as espécies de lianas da Estação Ecológica do Noroeste Paulista (EENP) e as compara àquelas encontradas em outros fragmentos florestais. A EENP (20º48'36'' S e 49º22'50'' W) está a 468 m de altitude e abrange área de 168,63 ha, composta de três fragmentos de vegetação descontínua, classificada como floresta estacional semidecidual, entremeadas por pastagens. As amostras de lianas foram coletadas realizando caminhadas na periferia e no interior da mata. Foram identificadas 105 espécies; delas, 99 são Magnoliopsida (60 gêneros e 22 famílias); e seis, Liliopsida (três gêneros e três famílias). As famílias mais ricas em espécies representaram 59% do total das lianas. A análise do dendrograma de similaridade mostrou que esta é baixa entre a Floresta Atlântica de São Paulo e aquelas localizadas no interior. Situação semelhante foi observada por outros autores na análise de similaridade com espécies de porte arbóreo, e também, entre florestas do interior e Floresta Atlântica.

Florística de lianas em um fragmento de floresta estacional semidecidual, Parque Estadual de Vassununga, Santa Rita do Passa Quatro, SP, Brasil

Embora o conhecimento sobre a florística dos fragmentos de florestas estacionais semideciduais tenha crescido nos últimos anos, ainda sabe-se pouco sobre a comunidade de lianas (lenhosas ou herbáceas) nesses fragmentos. Assim, foi realizado o levantamento florístico de lianas na gleba Maravilha, pertencente ao Parque Estadual de Vassununga (Santa Rita do Passa Quatro, SP), a fim de colaborar com o conhecimento dessa comunidade e subsidiar futuros trabalhos que envolvam essa forma de vida. A área de estudo compreende 127,08 ha, com inverno seco e temperatura média anual de 22 ºC. Para a coleta do material, percorreu-se mensalmente toda a borda do fragmento e três trilhas no interior da mata, de agosto/2002 a setembro/2003. Foram identificadas 120 espécies de lianas, pertencentes a 30 famílias e 71 gêneros, das quais 51% das espécies são volúveis, 42% apresentam gavinhas e apenas 7% são escandentes. As famílias mais representativas em número de espécies foram: Bignoniaceae (26), Malpighiaceae (14), Sapindaceae (12) e Asteraceae (9). Houve baixa similaridade florística entre as espécies de lianas presentes na gleba Maravilha em relação a outras áreas de florestas estacionais semideciduais do interior paulista.

Critérios para a amostragem de lianas: comparação e estimativa da abundância e biomassa de lianas no Cerrado

Lianas play a key role in many tropical forests ecosystems, contributing to community abundance, diversity and structure. Techniques to census lianas and estimate biomass have been used mainly in tropical forests. The aim of this study was to verify if different measurement location on the stem and inclusion criteria influence the estimations of liana abundance and biomass in Cerrado. The study was carried out at Itirapina fragment (ca 260 ha) located in Sao Paulo, Southeast Brazil. We measured all apparent ramets of rooted lianas by using different inclusion criteria: >= 0.5 cm in diameter at 30 cm basal area (D_30), and at 130 cm diameter breast height (DBH), in 36 transects (10 x 25 m). We compared the biomass using the allometric equation based on data from tropical florest take at 130 cm (DBH) and other The allometric biomass equation development to estimate the aboveground biomass of live lianas in tropical forests (DAP = 130 cm) was used. We tested the liana biomass, based on measurements taken at (D_30) using two different conversion equations. The results did not show significant differences in liana abundance and above ground biomass estimated applying the different criteria of inclusion However the biomass estimated from data collected at D_30 and converted into DAP showed a tendency to increase in biomass. Our findings suggest that the protocol used to the census of liana and the allometric biomass equation proposed to forests can be applied in the Cerrado.

Variation in liana abundance and biomass along an elevational gradient in the tropical Atlantic Forest (Brazil)

Lianas play a key role in forest structure, species diversity, as well as functional aspects of tropical forests. Although the study of lianas in the tropics has increased dramatically in recent years, basic information on liana communities for the Brazilian Atlantic Forest is still scarce. To understand general patterns of liana abundance and biomass along an elevational gradient (0-1,100 m asl) of coastal Atlantic Forest, we carried out a standard census for lianas a parts per thousand yen1 cm in five 1-ha plots distributed across different forest sites. On average, we found a twofold variation in liana abundance and biomass between lowland and other forest types. Large lianas (a parts per thousand yen10 cm) accounted for 26-35% of total liana biomass at lower elevations, but they were not recorded in montane forests. Although the abundance of lianas displayed strong spatial structure at short distances, the present local forest structure played a minor role structuring liana communities at the scale of 0.01 ha. Compared to similar moist and wet Neotropical forests, lianas are slightly less abundant in the Atlantic Forest, but the total biomass is similar. Our study highlights two important points: (1) despite some studies have shown the importance of small-scale canopy disturbance and support availability, the spatial scale of the relationships between lianas and forest structure can vary greatly among tropical forests; (2) our results add to the evidence that past canopy disturbance levels and minimum temperature variation exert influence on the structure of liana communities in tropical moist forests, particularly along short and steep elevational gradients.

Cheaper Faster Drug Development Validated By The Repositioning Of Drugs Against Neglected Tropical Diseases.

There is an urgent need to make drug discovery cheaper and faster. This will enable the development of treatments for diseases currently neglected for economic reasons, such as tropical and orphan diseases, and generally increase the supply of new drugs. Here, we report the Robot Scientist 'Eve' designed to make drug discovery more economical. A Robot Scientist is a laboratory automation system that uses artificial intelligence (AI) techniques to discover scientific knowledge through cycles of experimentation. Eve integrates and automates library-screening, hit-confirmation, and lead generation through cycles of quantitative structure activity relationship learning and testing. Using econometric modelling we demonstrate that the use of AI to select compounds economically outperforms standard drug screening. For further efficiency Eve uses a standardized form of assay to compute Boolean functions of compound properties. These assays can be quickly and cheaply engineered using synthetic biology, enabling more targets to be assayed for a given budget. Eve has repositioned several drugs against specific targets in parasites that cause tropical diseases. One validated discovery is that the anti-cancer compound TNP-470 is a potent inhibitor of dihydrofolate reductase from the malaria-causing parasite Plasmodium vivax.

Environmental Controls In The Water Use Patterns Of A Tropical Cloud Forest Tree Species, Drimys Brasiliensis (winteraceae).

Trees from tropical montane cloud forest (TMCF) display very dynamic patterns of water use. They are capable of downwards water transport towards the soil during leaf-wetting events, likely a consequence of foliar water uptake (FWU), as well as high rates of night-time transpiration (Enight) during drier nights. These two processes might represent important sources of water losses and gains to the plant, but little is known about the environmental factors controlling these water fluxes. We evaluated how contrasting atmospheric and soil water conditions control diurnal, nocturnal and seasonal dynamics of sap flow in Drimys brasiliensis (Miers), a common Neotropical cloud forest species. We monitored the seasonal variation of soil water content, micrometeorological conditions and sap flow of D. brasiliensis trees in the field during wet and dry seasons. We also conducted a greenhouse experiment exposing D. brasiliensis saplings under contrasting soil water conditions to deuterium-labelled fog water. We found that during the night D. brasiliensis possesses heightened stomatal sensitivity to soil drought and vapour pressure deficit, which reduces night-time water loss. Leaf-wetting events had a strong suppressive effect on tree transpiration (E). Foliar water uptake increased in magnitude with drier soil and during longer leaf-wetting events. The difference between diurnal and nocturnal stomatal behaviour in D. brasiliensis could be attributed to an optimization of carbon gain when leaves are dry, as well as minimization of nocturnal water loss. The leaf-wetting events on the other hand seem important to D. brasiliensis water balance, especially during soil droughts, both by suppressing tree transpiration (E) and as a small additional water supply through FWU. Our results suggest that decreases in leaf-wetting events in TMCF might increase D. brasiliensis water loss and decrease its water gains, which could compromise its ecophysiological performance and survival during dry periods.

Determination Of The Phenolic Composition From Brazilian Tropical Fruits By Uhplc-ms/ms.

Although Brazil is the third largest fruit producer in the world, several specimens consumed are not well studied from the chemical viewpoint, especially for quantitative analysis. For this reason and the crescent employment of mass spectrometry (MS) techniques in food science we selected twenty-two phenolic compounds with important biological activities and developed an ultra-high performance liquid chromatography tandem mass spectrometry (UHPLC-MS/MS) method using electrospray (ESI) in negative ion mode aiming their quantification in largely consumed Brazilian fruits (açaí-do-Amazonas, acerola, cashew apple, camu-camu, pineapple and taperebá). Multiple reaction monitoring (MRM) was applied and the selection of proper product ions for each transition assured high selectivity. Linearity (0.99580%), precision (CV<20%) and extraction recovery rate (>80%) were satisfactory and showed that the method provides an efficient protocol to analyze phenolic compounds in fruit pulp extracts.

The Role Of Edaphic Environment And Climate In Structuring Phylogenetic Pattern In Seasonally Dry Tropical Plant Communities.

Seasonally dry tropical plant formations (SDTF) are likely to exhibit phylogenetic clustering owing to niche conservatism driven by a strong environmental filter (water stress), but heterogeneous edaphic environments and life histories may result in heterogeneity in degree of phylogenetic clustering. We investigated phylogenetic patterns across ecological gradients related to water availability (edaphic environment and climate) in the Caatinga, a SDTF in Brazil. Caatinga is characterized by semiarid climate and three distinct edaphic environments - sedimentary, crystalline, and inselberg -representing a decreasing gradient in soil water availability. We used two measures of phylogenetic diversity: Net Relatedness Index based on the entire phylogeny among species present in a site, reflecting long-term diversification; and Nearest Taxon Index based on the tips of the phylogeny, reflecting more recent diversification. We also evaluated woody species in contrast to herbaceous species. The main climatic variable influencing phylogenetic pattern was precipitation in the driest quarter, particularly for herbaceous species, suggesting that environmental filtering related to minimal periods of precipitation is an important driver of Caatinga biodiversity, as one might expect for a SDTF. Woody species tended to show phylogenetic clustering whereas herbaceous species tended towards phylogenetic overdispersion. We also found phylogenetic clustering in two edaphic environments (sedimentary and crystalline) in contrast to phylogenetic overdispersion in the third (inselberg). We conclude that while niche conservatism is evident in phylogenetic clustering in the Caatinga, this is not a universal pattern likely due to heterogeneity in the degree of realized environmental filtering across edaphic environments. Thus, SDTF, in spite of a strong shared environmental filter, are potentially heterogeneous in phylogenetic structuring. Our results support the need for scientifically informed conservation strategies in the Caatinga and other SDTF regions that have not previously been prioritized for conservation in order to take into account this heterogeneity.