Hespellia stercorisuis gen. nov., sp nov and Hespellia porcina sp nov., isolated from swine manure storage pits

Four Gram-positive-staining, strictly anaerobic, non-spore-forming, rod-shaped organisms were isolated from a pig manure storage pit. Comparative 16S rRNA gene sequence analysis revealed that the isolates belonged to two related but distinct groups. Sequence analysis showed that the two groups of isolates were highly related to each other (approx. 97% 16S rRNA gene sequence similarity), forming a distinct cluster within the Clostridium coccoides suprageneric rDNA grouping. Biochemical and physiological studies confirmed the division of the isolates into two related, albeit distinct, groups. Based on both phenotypic and phylogenetic evidence, it is proposed that the unidentified rod-shaped isolates from pig manure should be classified in a novel genus, Hespellia gen. nov., as Hespellia stercorisuis sp. nov. and Hespellia porcina sp. nov. The type species of the novel genus is H. stercorisuis (type strain, PC18(T) = NRRL B-23456(T) = CCUG 46279(T) = ATCC BAA-677(T)) and the type strain of H. porcina is PC80(T) (= NRRL B-23458(T) = ATCC BAA-674(T)).

Bacteroides coprosuis sp nov., isolated from swine-manure storage pits

Two Gram-negative, anaerobic, non-spore-forming, rod-shaped organisms were isolated from a swine-manure storage pit. Based on morphological and biochemical criteria, the strains were tentatively identified as belonging to the genus Bacteroides but they did not appear to correspond to any recognized species of the genus. Comparative 16S rRNA gene sequencing studies showed that the strains were related closely to each other and confirmed their placement in the genus Bacteroides, but sequence divergence values of > 10% from reference Bacteroides species demonstrated that the organisms from manure represent a novel species. Based on biochemical criteria and molecular genetic evidence, it is proposed that the unknown isolates from manure be assigned to a novel species of the genus Bacteroides, as Bacteroides coprosuis sp. nov. The type strain is PC139(T) (=CCUG 50528(T)=NRRL B-41113(T)).

Atopostipes suicloacale gen. nov., sp. nov., isolated from an underground swine manure storage pit

Phenotypic and molecular genetic studies were performed on an unknown facultative anaerobic, catalase-negative, non-spore-forming, rod-shaped bacterium isolated from a pig manure storage pit. The unknown bacterium was nutritionally fastidious with growth enhanced by the addition of rumen fluid and was phenotypically initially identified as an Eubacterium species. Comparative 16S rRNA gene sequencing studies, however, revealed that the unknown bacterium was phylogenetically distant from Eubacterium limosum (the type species of the genus Eubacterium) and related organisms. Phylogenetically, the unknown species displayed a close association with an uncultured organism from human subgingival plaque and formed an unknown sub-line within a cluster of organisms which includes Alloioccoccus otitis, Alkalibacterium olivoapovliticus, Allofustis seminis, Dolosigranulum pigrum, and related organisms, within the low mol% G + C Gram-positive bacteria. Sequence divergence values of > 8% with all known taxonomically recognised taxa, however, clearly indicates the novel bacterium represents a hitherto unknown genus. Based on both phenotypic and phylogenetic considerations, it is proposed that the unknown bacterium from pig manure be classified in a new genus and species, as Atopostipes suicloacale gen. nov., sp. nov. The type strain of Atopostipes suicloacale is PPC79(T) = NRRL 23919(T) = DSM 15692(T). Crown Copyright (C) 2004 Published by Elsevier Ltd. All rights reserved.

Addition of lipolytic enzyme in anaerobic co-digestion of swine manure and inclusion levels of waste vegetable oil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Fertilizer and Swine Manure Management Systems Impacts on Phosphorus in Soil and Subsurface Tile Drainage

Swine manure and fertilizer can be used to supply the nitrogen (N) and phosphorus (P) needs of crops. Excess P application sometimes applied with N-based manure for corn increases the risk of P loss and water quality impairment. Poor water quality in Iowa streams and lakes due to excess P has prompted questions about the impact of cropping and nutrient management systems on P loss from fields.

Impact of Liquid Swine Manure Application and Cover Crops on Ground Water Quality

The primary objective of this project was to determine the impact of appropriate rates of swine manure applications to corn and soybeans based on nitrogen and phosphorus requirements of crops, soil phosphorus accumulation, and the potential of nitrate and phosphorus leaching to groundwater. Another purpose of this long-term experimental study was to develop and recommend appropriate manure and nutrient management practices to producers to minimize the water contamination potential and enhance the use of swine manure as inorganic fertilizer. A third component of this study was to determine the potential effects of rye as a cover crop to reduce nitrate loss to shallow ground water.

猪粪农用的生态风险——以东北黑土为例

集约化养殖大量使用铜(Cu)作为饲料添加剂会在养殖废物的排放和利用中导致一定的环境问题。随着东北老工业基地产业结构的调整，畜牧业作为东北地区二次振兴的主要产业得到迅速发展，由此会产生大量的畜禽粪便用于农业土壤施肥。而东北地区又是我国重要的农副产品生产基地，研究畜禽粪便农用的健康及环境风险就显得殊为必要。黑土是东北地区最主要的土壤类型，本文以东北黑土为供试材料，通过在盆栽实验中添加不同Cu浓度的猪粪来模拟施肥年限不同的菜园土，研究土壤中Cu累积对小白菜(Brassica chinensis L.)地上部分生物量与Cu含量、土壤微生物生物量和土壤酶(脱氢酶、脲酶、酸性磷酸酶)活性、微生物群落功能多样性以及对土壤功能微生物——氨氧化古菌(AOA)和氨氧化细菌(AOB)等的影响，从而实现含Cu猪粪农用对食物链途径的健康风险以及土壤生态系统的生态风险的综合评价。 研究结果表明，施用猪粪显著地改善了土壤的pH，增加了小白菜地上部分生物量，对其体内Cu浓度则没有显著影响;小白菜地上部分Cu浓度与土壤全Cu和水溶态Cu浓度显著正相关(P<0.01)，而地上生物量与土壤全Cu浓度显著负相关(P<0.05)。当土壤全Cu浓度达到300 mg kg-1后，小白菜地上部分生物量受到强烈抑制。 猪粪的施用在一定时期内显著地促进了脱氢酶和脲酶的活性，但随土壤Cu浓度的增加，脱氢酶、脲酶和酸性磷酸酶的活性逐渐受到抑制。当土壤全Cu浓度达到300 mg kg-1后，微生物生物量、脱氢酶、脲酶、酸性磷酸酶等均受到强烈抑制。 施加猪粪提高了土壤微生物群落功能多样性，当土壤Cu浓度达到170 mg kg-1后，显著地抑制了微生物群落功能多样性。种植小白菜后，各处理间微生物群落功能多样性没有显著差异，意味着植物能够维持微生物群落功能多样性。主成分分析(PCA)结果显示，当土壤全Cu浓度达到300 mg kg-1后，微生物群落功能多样性与其它处理显著不同。 猪粪显著地促进了土壤的硝化潜势速率(PNR)。随着Cu浓度的增加，硝化潜势速率逐渐受到抑制，当土壤全Cu浓度达到170 mg kg-1后，即与对照无显著差异。植物在维持硝化速率方面也起到重要作用。古菌amoA基因在每克干土中的拷贝数在9.4*106~2.59*107，细菌amoA基因在每克干土中的拷贝数约为1.48*106~1.41*107。猪粪在一定时期内显著地增加了AOA和AOB的数量，当土壤Cu浓度达到300 mg kg-1后，AOA和AOB的数量显著下降，并且AOA与AOB amoA基因拷贝数的比值增加，在小白菜栽种前(B1)和小白菜收获后(B2)分别为2.33和9.26，这意味着在高Cu浓度胁迫下，AOA的耐受性更强。古菌与细菌的amoA拷贝数与PNR之间则没有显著的相关关系，意味着AOA和AOB种群结构以及其中某些种群的活性可能发生了变化。 本文通过对东北黑土菜地土壤中Cu在作物体内的迁移积累及其对土壤微生物学指标(微生物生物量、酶活性、微生物群落功能多样性及功能微生物)的影响的综合研究，揭示了含Cu猪粪农用所造成的健康和生态风险，为建立适宜的土壤环境质量标准提供了一定的科学依据。通过本研究得出，黑土蔬菜种植中Cu浓度的阈值在170-300 mg kg-1之间。

Reducing H2S production by O-2 feedback control during large-scale sewage sludge composting

Hydrogen sulfide (H2S) production patterns and the influence of oxygen (O-2) concentration were studied based on a well operated composting plant. A real-time, online multi-gas detection system was applied to monitor the concentrations of H2S and O-2 in the pile during composting. The results indicate that H2S was mainly produced during the early stage of composting, especially during the first 40 h. Lack of available O-2 was the main reason for H2S production. Maintaining the O-2 concentration higher than 14% in the pile could reduce H2S production. This study suggests that shortening the interval between aeration or aerating continuously to maintain a high O-2 concentration in the pile was an effective strategy for restraining H2S production in sewage sludge composting. (C) 2010 Elsevier Ltd. All rights reserved.

Analyse par spectrométrie de masse des antibiotiques vétérinaires liés à l’élevage porcin

L’élevage des porcs représente une source importante de déversement d’antibiotiques dans l’environnement par l’intermédiaire de l’épandage du lisier qui contient une grande quantité de ces molécules sur les champs agricoles. Il a été prouvé que ces molécules biologiquement actives peuvent avoir un impact toxique sur l’écosystème. Par ailleurs, elles sont aussi suspectées d’engendrer des problèmes sanitaires et de contribuer à la résistance bactérienne pouvant mener à des infections difficilement traitables chez les humains. Le contrôle de ces substances dans l’environnement est donc nécessaire. De nombreuses méthodes analytiques sont proposées dans la littérature scientifique pour recenser ces composés dans plusieurs types de matrice. Cependant, peu de ces méthodes permettent l’analyse de ces contaminants dans des matrices issues de l’élevage agricole intensif. Par ailleurs, les méthodes analytiques disponibles sont souvent sujettes à des faux positifs compte tenu de la complexité des matrices étudiées et du matériel utilisé et ne prennent souvent pas en compte les métabolites et produits de dégradation. Enfin, les niveaux d’analyse atteints avec ces méthodes ne sont parfois plus à jour étant donné l’évolution de la chimie analytique et de la spectrométrie de masse. Dans cette optique, de nouvelles méthodes d’analyses ont été développées pour rechercher et quantifier les antibiotiques dans des matrices dérivées de l’élevage intensif des porcs en essayant de proposer des approches alternatives sensibles, sélectives et robustes pour quantifier ces molécules. Une première méthode d’analyse basée sur une technique d’introduction d’échantillon alternative à l’aide d’une interface fonctionnant à l’aide d’une désorption thermique par diode laser munie d’une source à ionisation à pression atmosphérique, couplée à la spectrométrie de masse en tandem a été développée. L’objectif est de proposer une analyse plus rapide tout en atteignant des niveaux de concentration adaptés à la matrice étudiée. Cette technique d’analyse couplée à un traitement d’échantillon efficace a permis l’analyse de plusieurs antibiotiques vétérinaires de différentes classes dans des échantillons de lisier avec des temps d’analyse courts. Les limites de détection atteintes sont comprises entre 2,5 et 8,3 µg kg-1 et sont comparables avec celles pouvant être obtenues avec la chromatographie liquide dans une matrice similaire. En vue d’analyser simultanément une série de tétracyclines, une deuxième méthode d’analyse utilisant la chromatographie liquide couplée à la spectrométrie de masse à haute résolution (HRMS) a été proposée. L’utilisation de la HRMS a été motivée par le fait que cette technique d’analyse est moins sensible aux faux positifs que le triple quadripôle traditionnel. Des limites de détection comprises entre 1,5 et 3,6 µg kg-1 ont été atteintes dans des échantillons de lisier en utilisant un mode d’analyse par fragmentation. L’utilisation de méthodes de quantifications ciblées est une démarche intéressante lorsque la présence de contaminants est suspectée dans un échantillon. Toutefois, les contaminants non intégrés à cette méthode d’analyse ciblée ne peuvent être détectés même à de fortes concentrations. Dans ce contexte, une méthode d’analyse non ciblée a été développée pour la recherche de pharmaceutiques vétérinaires dans des effluents agricoles en utilisant la spectrométrie de masse à haute résolution et une cartouche SPE polymérique polyvalente. Cette méthode a permis l’identification d’antibiotiques et de pharmaceutiques couramment utilisés dans l’élevage porcin. La plupart des méthodes d’analyse disponibles dans la littérature se concentrent sur l’analyse des composés parents, mais pas sur les sous-produits de dégradation. L’approche utilisée dans la deuxième méthode d’analyse a donc été étendue et appliquée à d’autres classes d’antibiotiques pour mesurer les concentrations de plusieurs résidus d’antibiotiques dans les sols et les eaux de drainage d’un champ agricole expérimental. Les sols du champ renfermaient un mélange d’antibiotiques ainsi que leurs produits de dégradation relatifs à des concentrations mesurées jusqu’à 1020 µg kg-1. Une partie de ces composés ont voyagé par l’intermédiaire des eaux de drainage du champ ou des concentrations pouvant atteindre 3200 ng L-1 ont pu être relevées.

Effect of fertilization in water quality and in zooplankton community in open plankton-culture ponds

The effect of swine manure fertilization on the water quality of zooplankton artificial culture in two ponds was measured in diel cycles on different months (October 1999, January and March 2000). Fertilization affected directly water quality; values for total phosphorus were above 1.4 mgL(-1) and maximum rates for ammonia reached 108 mu gL(-1). Zooplankton community comprised four species, namely, Brachionus calyciflorus, B. falcatus, Moina sp. and Thermocyclops sp. B. falcatus (Rotifera) and Moina sp (Cladocera) were dominant respectively in January and in March. There was no difference in abundance of zooplankton between the two ponds (p>0.05), although adult cyclopoid Thermocyclops sp was different between diel cycles (p<0.05). There were significant differences (p<0.05) in dissolved oxygen, ammonia, total phosphorus, orthophosphate, nitrite and nitrate between ponds. In fact, only dissolved oxygen and pH were significantly different (p<0.05) between the ponds' surface and bottom. Organic fertilization also provided greater amount of nutrients and higher pH and conductivity, coupled to greater oscillations in the concentration of dissolved oxygen, directly affecting the zooplanktonic composition.

Biodigestão anaeróbia de dejetos de suínos com e sem separação da fração sólida em diferentes tempos de retenção hidráulica

O objetivo deste trabalho foi avaliar o processo de biodigestão anaeróbia utilizando dejetos de suínos, com e sem separação da fração sólida, considerando-se diferentes tempos de retenção hidráulica. Para tanto, foram utilizados biodigestores tubulares semicontínuos abastecidos com água residuária de suinocultura, com e sem separação da fração sólida (CSFS e SSFS, respectivamente), manejados com tempos de retenção hidráulica (TRH) iguais a 36; 29; 22 e 15 dias. A eficiência dos tratamentos foi avaliada pela redução dos números mais prováveis de coliformes totais e fecais, teores de fibra em detergentes neutro e ácido, demandas química e bioquímica de oxigênio e dos potenciais de produção de biogás e metano. A qualidade do biofertilizante foi avaliada quanto aos teores de macro e micronutrientes. A separação da fração sólida acarretou decréscimo nos teores de fibra dos afluentes, o que contribuiu para o aumento da eficiência da produção de metano. Foram observados valores de 0,47 e 0,75 m³ CH4 kg-1 SV adicionado para os afluentes SSFS e CSFS, respectivamente, no TRH de 15 dias. Com o aumento do TRH, houve acréscimo médio de 50% no potencial de produção de metano kg-1 de SV adicionado. Não foram observadas diferenças significativas nas reduções de coliformes fecais e totais, sendo a maior redução de 3,6 10(9) para 3,6 10² NMP 100 mL-1 para o TRH de 36 dias CSFS.

Potencial de produção de biogás remanescente nos efluentes de biodigestores abastecidos com dejetos de suínos, com e sem separação da fração sólida, e conduzidos sob diferentes tempos de retenção hidráulica

O objetivo foi avaliar o potencial poluidor remanescente dos efluentes de biodigestores abastecidos com dejetos de suínos com separação da fração sólida (CSFS) e sem separação da fração sólida (SSFS), e conduzidos sob diferentes tempos de retenção hidráulica (TRH). Os efluentes utilizados eram de biodigestores semicontínuos manejados com TRH de 15; 22; 29 e 36 dias, com e sem separação da fração sólida. Foram utilizados biodigestores batelada, que permaneceram em operação por todo o tempo em que houve produção de biogás (60 dias). Foram avaliadas a produção e a qualidade do biogás, bem como os potenciais de produção por kg de sólidos totais e sólidos voláteis, e as demandas química e bioquímica de oxigênio. Utilizou-se do delineamento inteiramente casualisado, em esquema fatorial 2x4, com três repetições por tratamento. Foram encontrados potenciais de produção de 385 e 117 litros de CH4kg-1 de SV adicionados no material SSFS e CSFS, respectivamente, no menor TRH (15 dias), e potenciais de produção de 74 e 18 litros de CH4kg-1 de SV adicionados no material SSFS e CSFS, respectivamente, no maior TRH (36 dias).

Effects of biofertilizer rates on the structural, morphogenetic and productive characteristics of Piata grass

The objective of this study was to investigate the influence of different levels of biofertilizers from cattle and swine manure on the structural, morphogenetic and productive characteristics of Brachiaria brizantha cv. Piata. The experiment was arranged in a completely randomized factorial design with split plots. The plots were defined by eight treatments: two biofertilizers (cattle and swine), four levels (0, 100, 200 and 300 kg N.ha(-1)) and subplots by four different cutting periods. The cutting for plant uniformity was performed at 45 days after sowing at 15 cm above the soil surface. The biofertilizeres were applied in a single level, after the cutting of plants, in rates of 0, 0.23 and 0.19, 0.45 and 0.38, 0.68 and 0.57 liters pot(-1) for the biofertilizers from cattle and swine manure, respectively. These rates were also equivalent to levels of 0, 100, 200 and 300 kg N.ha(-1). There was no significant difference between the types of biofertilizers as there was no interaction between them and the different levels, hence both biofertilizers could be applied without any loss of nutrient intake by the plants used in this experiment. There was a significant difference between the production of green and dry matter, the leaf appearance rate, phyllochron, leaf and pseudostem elongation rates, number of green leaves, final leaf length, number and weight of tillers, according to the increase of nitrogen rates, following linear prediction model. Effect of the cutting periods was also observed, once the plants harvested during the summer presented greater performance of structural and morphogenetic characteristics.

Produção de pimentão em substratos e fertirrigação com efluente de biodigestor

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Farelo de algodão em rações para suínos nas fases de crescimento e terminação

Forty-eight pigs with 63 day olds and average weight of 23.40±1.3 kg, were allotted in a randomized block design with three treatments(0%, 10% and 20% of cottonseed meal (FA) in diets) and eight replicates with two pigs (one barrow and one gilt). The blocks were used to control changes in initial body weight. Experimental period was the growth phase (63 to 106 days old) and growing-finishing (63 to 147 days old). In each phase the diets were isonutritives, varying however the levels of crude fiber. The levels of cottonseed meal (FA) did not affect (p>0.05) the performance of animals during the growth phase or during the total period of evaluation (growingfinishing). The qualitative parameters of manure indicated that the FA determined decrease in the nitrogen and phosphorus content, but only in the growth phase. In the finishing phase the increase in the FA inclusion promoted an increase in dry matter content. Although FA can be used in up to 20% in diets for pigs in the growing and finishing phase, it is necessary to include L-lysine and soybean oil which causes an increase in cost per kg produced pig.