Phylogeny of the Sporobolus indicus complex, based on internal transcribed spacer (ITS) sequences

The entire internal transcribed spacer ( ITS) region, including the 5.8S subunit of the nuclear ribosomal DNA ( rDNA), was sequenced by direct double-stranded sequencing of polymerase chain reaction (PCR) amplified fragments. The study included 40 Sporobolus ( Family Poaceae, subfamily Chloridoideae) seed collections from 14 putative species ( all 11 species from the S. indicus complex and three Australian native species). These sequences, along with those from two out-group species [ Pennisetum alopecuroides ( L.) Spreng. and Heteropogon contortus ( L.) P. Beauv. ex Roemer & Schultes, Poaceae, subfamily Panicoideae], were analysed by the parsimony method (PAUP; version 4.0b4a) to infer phylogenetic relationships among these species. The length of the ITS1, 5.8S subunit and ITS2 region were 222, 164 and 218 base pairs ( bp), respectively, in all species of the S. indicus complex, except for the ITS2 region of S. diandrus P. Beauv. individuals, which was 217 bp long. Of the 624 characters included in the analysis, 245 ( 39.3%) of the 330 variable sites contained potential phylogenetic information. Differences in sequences among the members of the S. pyramidalis P. Beauv., S. natalensis (Steud.) Dur & Schinz and S. jacquemontii Kunth. collections were 0%, while differences ranged from 0 to 2% between these and other species of the complex. Similarly, differences in sequences among collections of S. laxus B. K. Simon, S. sessilis B. K. Simon, S. elongatus R. Br. and S. creber De Nardi were 0%, compared with differences of 1-2% between these four species and the rest of the complex. When comparing S. fertilis ( Steud.) Clayton and S. africanus (Poir.) Robyns & Tourney, differences between collections ranged from 0 to 1%. Parsimony analysis grouped all 11 species of the S. indicus complex together, indicating a monophyletic origin. For the entire data set, pair-wise distances among members of the S. indicus complex varied from 0.00 to 1.58%, compared with a range of 20.08-21.44% among species in the complex and the Australian native species studied. A strict consensus phylogenetic tree separated 11 species of the S. indicus complex into five major clades. The phylogeny, based on ITS sequences, was found to be congruent with an earlier study on the taxonomic relationship of the weedy Sporobolus grasses revealed from random amplified polymorphic DNA ( RAPD). However, this cladistic analysis of the complex was not in agreement with that created on past morphological analyses and therefore gives a new insight into the phylogeny of the S. indicus complex.

An identification tool for the Australian weedy Sporobolus species based on random amplified polymorphic DNA (RAPD) profiles

Based on morphological features alone, there is considerable difficulty in identifying the 5 most economically damaging weed species of Sporobolus [ viz. S. pyramidalis P. Beauv., S. natalensis ( Steud.) Dur and Schinz, S. fertilis ( Steud.) Clayton, S. africanus (Poir.) Robyns and Tourney, and S. jacquemontii Kunth.] found in Australia. A polymerase chain reaction (PCR)-based random amplified polymorphic DNA ( RAPD) technique was used to create a series of genetic markers that could positively identify the 5 major weeds from the other less damaging weedy and native Sporobolus species. In the initial RAPD pro. ling experiment, using arbitrarily selected primers and involving 12 species of Sporobolus, 12 genetic markers were found that, when used in combination, could consistently identify the 5 weedy species from all others. Of these 12 markers, the most diagnostic were UBC51(490) for S. pyramidalis and S. natalensis; UBC43(310,2000,2100) for S. fertilis and S. africanus; and OPA20(850) and UBC43(470) for S. jacquemontii. Species-specific markers could be found only for S. jacquemontii. In an effort to understand why there was difficulty in obtaining species-specific markers for some of the weedy species, a RAPD data matrix was created using 40 RAPD products. These 40 products amplified by 6 random primers from 45 individuals belonging to 12 species, were then subjected to numerical taxonomy and multivariate system (NTSYS pc version 1.70) analysis. The RAPD similarity matrix generated from the analysis indicated that S. pyramidalis was genetically more similar to S. natalensis than to other species of the 'S. indicus complex'. Similarly, S. jacquemontii was more similar to S. pyramidalis, and S. fertilis was more similar to S. africanus than to other species of the complex. Sporobolus pyramidalis, S. jacquemontii, S. africanus, and S. creber exhibited a low within-species genetic diversity, whereas high genetic diversity was observed within S. natalensis, S. fertilis, S. sessilis, S. elongates, and S. laxus. Cluster analysis placed all of the introduced species ( major and minor weedy species) into one major cluster, with S. pyramidalis and S. natalensis in one distinct subcluster and S. fertilis and S. africanus in another. The native species formed separate clusters in the phenograms. The close genetic similarity of S. pyramidalis to S. natalensis, and S. fertilis to S. africanus may explain the difficulty in obtaining RAPD species-specific markers. The importance of these results will be within the Australian dairy and beef industries and will aid in the development of integrated management strategy for these weeds.

Effect of growing site, moisture stress and seed size on viability and dormancy of Sporobolus pyramidalis (giant rats tail grass) seed

Sporobolus pyramidalis P. Beauv (giant rats tail grass) is a serious agricultural and environmental weed in tropical and subtropical areas of Australia. Infestations of this unpalatable plant reduce the productivity of pastures and the profitability of industries dependent on grazing animals. This paper reports a series of studies undertaken to assist in the development of control strategies for this species. In particular, these studies measured the viability and dormancy status of fresh seed of S. pyramidalis and the decline of dormancy with time. Variability in these characteristics was determined in seeds collected from several sites within south-east Queensland. The effect of moisture availability during the inflorescence and seed production phases on seed viability and dormancy was also determined. The dormancy of freshly collected seed from several sites ranged from 15 to 95%, but decreased to negligible levels after 4-6 months. Seeds that matured under conditions of high moisture availability were initially more dormant than seeds matured where moisture was less readily available. The proportion of viable seeds was significantly lower in smaller than larger seeds even though viability for all seed sizes exceeded 90%. This study has shown that seed of S. pyramidalis generally has high viability with a large proportion of the seed germinable soon after maturity.

Does habitat modification affect oviposition by the salt marsh mosquito, Ochlerotatus vigilax (Skuse) (Diptera : Culicidae)?

Studies were conducted at sites in south-cast Queensland, Australia, to investigate the effect of habitat modification for mosquito control on the distribution of eggshells of the salt marsh mosquito, Ochlerotatus vigilax (Skuse). Modifications were mainly tunnelling, but an Open Marsh Water Management (OMWM) site and a grid-ditched site were also included. There were two separate experimental designs: one was data collected Before and After (BA) modification and the other was for other sites with a Treatment and Control (TC) experimental design. For the BA data, there were significant reductions in eggshells after modification. Eggshells were generally fewer after modification in areas which were close to unrestricted tidal flushing. A sandy substrate and vegetation changes which resulted in reduced Sporobolus virginicus or mixed Sporobolus and Sarcocornia quinqueflora also contributed to the effect. In the TC experiment, there was no effect of modification at the tunnelled site, eggshells were fewer at the OMWM site, but there were more eggshells at the grid-ditched site. There was some general indication that recent oviposition activity was reduced in sites that had been modified, evidenced by a relatively small proportion of young (dark coloured) eggshells.

Relatório Preliminar sobre a Biodiversidade - Complexo de Árias protegidas do Leste da Ilha da Boa Vista

O Complexo de Áreas Protegidas do Leste da Ilha da Boa Vista (CAPLBV) inclui áreas terrestres, costeiras e marinhas bem como algumas colinas de baixa altitude em suas zonas terrestres (como a Ponta de Chã de Tarafe e o Monumento Natural de Monte Estância) na parte oriental da ilha da Boa Vista e estende-se por uma vasta área desde a Ponta de Ajudante a sul até a Ponta de Chã de Tarafe a norte. A biodiversidade da ilha da Boa Vista é caracterizada pela existência de várias comunidades de fauna e flora representativas dos ecossistemas costeiros e marinhos de Cabo Verde, da qual se destaca a tartaruga marinha Caretta caretta que aqui tem a sua principal área de desova em Cabo Verde. A vegetação costeira inclui Sporobolus spicatus, Cakile maritima, Sesuvium sesuvioides, Zygophylum fontanesii e Zygophylum simplex, sendo que as espécies mais representativas nas áreas lagunares são Arthrocnemum glaucum, Zygophylum waterlotii, Zygophylum fontanesii, Sporobolus minutus, Sporobolus spicatus e Cyperus bulbosus. A avifauna associada inclui Charadrius alexandrinus, Himantopus himantopus, Arenaria interpres, Pluvialis squatarola, Tringa nebularia, Ardea cinerea, Egretta garcetta, Ibis bulbucus, Platalea leucorodia, Pandion haliaetus, Fregata magnificens, Calonectris edwardsii, Sula leucogaster, Phaethon aethereus, Pelagodroma marina e Oceanodroma castro. As comunidades de corais ao longo da costa da ilha da Boa Vista, nomeadamente no ilhéu de Sal Rei e na baía das Gatas são das mais diversificadas e abundantes de todo o território de Cabo Verde (Cabo Verde 2000, 2001). As espécies do género Conus apresentam uma elevada diversidade e um elevado grau de endemismo. Várias espécies de tubarões e peixes pelágicos bem como mamíferos marinhos se reproduzem nas águas costeiras da Boa Vista. O presente relatório tem como objectivo caracterizar o ambiente terrestre, costeiro e marinho em geral, identificar e avaliar a situação da biodiversidade na área proposta para fazer parte do CAPLBV e nas áreas circundantes, através do levantamento, com recurso à pesquisa bibliográfica e saídas de campo, da diversidade e abundância da flora e fauna, em especial das espécies em vias de extinção e as endémicas, das espécies com importância ecológica no contexto internacional decorrente da posição biogeográfica do arquipélago e das espécies com importância ecológica e económica para a ilha da Boa Vista bem como para o arquipélago de Cabo Verde.

Influencia de la introducción de Eragrostis lehmanniana sobre la comunidad de gramíneas en la Reserva de Ñacuñán (Mendoza, Argentina)

En 1976 se sembró E. lehmanniana Nees en la Reserva de Ñacuñán. Se evaluaron, después de 24 años de la siembra, la tasa lineal de dispersión, la abundancia y el impacto de esta especie exótica sobre la comunidad de gramíneas perennes nativas. Se compararon sitios dominados por la especie exótica con otros que incluían sólo vegetación nativa. Para comparar la cobertura de la canopia de las gramíneas, la cantidad de especies por parcela y la abundancia de la especie exótica se usó la prueba de Mann- Whitney. La especie exótica se dispersó 32 m año-1. Ella estaba presente en los caminos internos de la Reserva donde la vegetación nativa leñosa había sido eliminada y en el 45 % de los sitios ubicados en áreas no disturbadas adyacentes a los caminos. La cobertura total de las gramíneas nativas se redujo significativamente en los sitios donde la especie exótica estaba presente. La cantidad total de gramíneas por parcela no fue afectada por la presencia de E. lehmanniana. Pappophprum caespitosum, la gramínea dominante en Ñacuñán, y Sporobolus cryptandrus presentaron cobertura más baja en los sitios dominados por la especie exótica que en aquéllos no disturbados. La introducción de E. lehmanniana tuvo un impacto negativo en la composición de la comunidad de gramíneas perennes nativas en los sitios disturbados de la Reserva.