On the extent of genetic variation for transpiration efficiency in sorghum

A glasshouse study examined 49 diverse sorghum lines for variation in transpiration efficiency. Three of the 49 lines grown were Sorghum spp, native to Australia; one was the major weed Johnson grass (Sorghum halepense), and the remaining 45 lines were cultivars of Sorghum bicolor. All plants were grown under non-limiting water and nutrient conditions using a semi-automatic pot watering system designed to facilitate accurate measurement of water use. Plants were harvested 56-58 days after sowing and dry weights of plant parts were determined. Transpiration efficiency differed significantly among cultivars. The 3 Australian native sorghums had much lower transpiration efficiency than the other 46 cultivars, which ranged from 7.7 to 6.0 g/kg. For the 46 diverse cultivars, the ratio of range in transpiration efficiency to its l.s.d. was 2.0, which was similar to that found among more adapted cultivars in a previous study. This is a significant finding as it suggests that there is likely to be little pay-off from pursuing screening of unadapted material for increased variation in transpiration efficiency. It is necessary, however, also to examine absolute levels of transpiration efficiency to determine whether increased levels have been found. The cultivar with greatest transpiration efficiency in this study (IS9710) had a value 9% greater (P < 0.05) than the accepted standard for adapted sorghum cultivars. The potential impact of such an increase in transpiration efficiency warrants continued effort to capture it. Transpiration efficiency has been related theoretically and experimentally to the degree of carbon isotope discrimination in leaf tissue in sorghum, which thus offers a relatively simple selection index. In this study, the variation in transpiration efficiency was not related simply to carbon isotope discrimination. Significant associations of transpiration efficiency with ash content and indices of photosynthetic capacity were found. However, the associations were not strong. These results suggest that a simple screening technique could not be based on any of the measures or indices analysed in this study. A better understanding of the physiological basis of the observed genetic differences in transpiration efficiency may assist in developing reliable selection indices. It was concluded that the potential value of the improvement in transpiration efficiency over the accepted standard and the degree of genetic variation found warrant further study on this subject. It was suggested that screening for genetic variation under water-limiting conditions may provide useful insights and should be pursued.

Peronosclerospora sorghi, o agente etiológico do míldio do sorgo

O agente etiológico do míldio do sorgo, Peronosclerospora sorghi, infecta as culturas do sorgo (Sorghum spp.) e do milho (Zea mays). Esse patógeno encontra-se disseminado em muitas regiões tropicais e subtropicais do mundo e pode ocasionar danos significativos na produção de sorgo quando as condições climáticas são favoráveis à sua ocorrência e em cultivares de alta susceptibilidade. No Brasil, antes restrito aos estados da região Sul, o míldio foi registrado também nos estados da região Sudeste e Centro-Oeste, causando prejuízos principalmente em áreas de produção de sementes. O cultivo de genótipos resistentes é o método mais eficiente para o controle da doença. Entretanto, essa estratégia é dificultada pela alta variabilidade genética apresentada pelo patógeno. Essa revisão aborda aspectos da taxonomia, biologia e distribuição geográfica do míldio do sorgo e discute questões relacionadas com a sua epidemiologia e controle, enfatizando estratégias que utilizam resistência genética.

Abdômen agudo em equídeos no semiárido da região nordeste do Brasil

Foram revisados os casos de abdômen agudo de origem gastrintestinal em equídeos atendidos no Hospital Veterinário da Universidade Federal de Campina Grande, em Patos, Paraíba. No período de janeiro de 2001 a dezembro de 2010. Setenta (4,5%) do total de 1542 equídeos atendidos no período apresentaram quadro clínico de cólica, sendo 60 equinos, cinco muares e cinco asininos. A compactação de cólon maior foi a causa mais frequente de cólica, diagnosticada em 37,14% dos casos, seguida por compactação de cólon menor (10%) e corpo estranho de cólon menor (7,14%). Em quatro casos as cólicas foram causadas pela presença de fitobezoares no intestino grosso, sendo dois deles associados ao consumo de vagens de Prosopis juliflora. Em cinco casos foi observada a presença de corpos estranhos no cólon menor e em um caso os corposestranhos foram encontrados no cólon maior, sendo principalmente sacos plásticos. As lesões estrangulantes do intestino delgado foram observadas em quatro casos. Outras causas foram cólica espasmódica (dois casos por parasitose e dois por ingestão de resíduos domiciliares), sobrecarga gástrica (três casos) e deslocamento de cólon maior que foi diagnosticado em dois animais. Laceração de cólon menor, torção de ceco, compactação de ceco e timpanismo por consumo de Manihot esculenta foram diagnosticados em uma única ocasião. O principal fator de risco para o desenvolvimento de cólicas foi o consumo de Pennisetum purpureum, Brachiaria decumbens, Sorghum spp. ou Echinochloa polystachya picados manualmente ou em picotadeira ou triturados em forrageira (OR=4,03; P=0,007). Como resultado da baixa qualidade dos alimentos ingeridos, a frequência dos atendimentos de equídeos portadores de cólica foi significativamente maior no segundo semestre (época da seca na região estudada) (OR=2,61; P<0,01). Concluiu-se que a oferta de volumoso de baixa qualidade na seca contribui para a alta frequência de casos de cólica e que o manejo alimentar tem um papel importante na ocorrência da doença e, por isso, a sua melhoria pode influenciar positivamente na redução do número de casos de cólica em equídeos no semiárido nordestino.

Potencial de utilização de cobertura vegetal de sorgo e milheto na supressão de plantas daninhas em condição de campo: II - Efeitos da cobertura morta

A capacidade de supressão de plantas daninhas por culturas de cobertura é bastante conhecida e explorada, embora seja pouco pesquisada a importância relativa dos efeitos físicos e alelopáticos sobre esse fenômeno. Dois experimentos foram realizados a campo, em 1999/2000 e 2000/2001, na área experimental da Faculdade de Agronomia da UFRGS, no delineamento experimental em blocos ao acaso, com quatro repetições, objetivando determinar os efeitos da cobertura morta de plantas de sorgo e de milheto sobre a supressão de plantas daninhas. Nos dois anos de condução dos experimentos, os tratamentos resultaram de um fatorial, em que o fator A foi constituído pelos genótipos de sorgo RS 11, BR 601 e BR 304, representantes de três classes de produção de extratos radiculares hidrofóbicos em laboratório, pelo genótipo de milheto Comum RS e por uma testemunha sem culturas; e o fator B, constituído por níveis de palha de cada genótipo sobre o solo. Em 1999/2000, níveis de palha de sorgo de 1,3 t ha-1 foram suficientes para reduzir 50% das infestações de Brachiaria plantaginea (BRAPL) e Sida rhombifolia (SIDRH). Em 2000/2001, 4 t ha-1 de palha de sorgo ou milheto foram suficientes para reduzir 91, 96 e 59% da população total de SIDRH, BRAPL e Bidens pilosa, respectivamente. A presença de resíduos da parte aérea de sorgo é mais importante na supressão de plantas daninhas do que a presença de resíduos das raízes dessa cultura.

Potencial da utilização de coberturas vegetais de sorgo e milheto na supressão de plantas daninhas em condição de campo: I - plantas em desenvolvimento vegetativo

A supressão da infestação de plantas daninhas por espécies cultivadas como culturas de cobertura pode ocorrer durante o desenvolvimento vegetativo das espécies cultivadas como cultura de cobertura, nos estádios precoces de desenvolvimento, ou após a sua dessecação. Efeitos de competição e alelopáticos exercidos durante a coexistência das plantas de cobertura com as espécies daninhas podem ser responsáveis pelo efeito supressivo. Dois experimentos foram realizados a campo, em 1999/2000 e 2000/2001, na área experimental da Faculdade de Agronomia da UFRGS, em delineamento experimental de blocos ao acaso com quatro repetições, objetivando determinar os efeitos de plantas vegetando de genótipos de sorgo, com capacidade distinta de produção de extratos radiculares hidrofóbicos, sobre a supressão de plantas daninhas. Em 1999/2000, os tratamentos foram constituídos pelos genótipos de sorgo RS 11, BR 601 e BR 304, representantes de três classes de produção de extratos radiculares hidrofóbicos em laboratório, pelo genótipo de milheto Comum RS e por uma testemunha sem culturas. Em 2000/2001, os tratamentos foram resultantes da combinação do fator genótipo e do fator posição das plantas daninhas (linha ou entrelinha das culturas). Nos dois anos experimentais, a densidade e o crescimento de plantas daninhas (SIDRH, BIDSS e BRAPL) foram semelhantes entre os genótipos de sorgo e entre estes e o do milheto. Isso ocorreu independentemente do local avaliado, na área total ou individualmente nas linhas e entrelinhas das culturas, indicando ausência de efeito supressor de exudatos hidrofóbicos a campo. No primeiro ano, aos 30 dias após a semeadura, reduções de 41% de infestação e de 74% de massa seca total de plantas daninhas foram observadas, comparando-se os tratamentos cobertos com culturas à testemunha sem culturas, enquanto no segundo ano, aos 14 dias após a semeadura, não foram observadas diferenças entre a área onde havia plantas de sorgo ou milheto e a testemunha descoberta. A densidade de plantas daninhas nas linhas foi inversamente proporcional à população de plantas vivas de sorgo nesse local.

Analysis of genomic and functional RFLP derived markers associated with sucrose content, fiber and yield QTLs in a sugarcane (Saccharum spp.) commercial cross

Expressed sequence tags derived markers have a great potential to be used in functional map construction and QTL tagging. In the present work, sugarcane genomic probes and expressed sequence tags having homology to genes, mostly involved in carbohydrate metabolism were used in RFLP assays to identify putative QTLs as well as their epistatic interactions for fiber content, cane yield, pol and tones of sugar per hectare, at two crop cycles in a progeny derived from a bi-parental cross of sugarcane elite materials. A hundred and twenty marker trait associations were found, of which 26 at both crop cycle and 32 only at first ratoon cane. A sucrose synthase derived marker was associated with a putative QTL having a high negative effect on cane yield and also with a QTL having a positive effect on Pol at both crop cycles. Fifty digenic epistatic marker interactions were identified for the four traits evaluated. Of these, only two were observed at both crop cycles.

Analysis of long-term light-trap data for Helicoverpa spp. (Lepidoptera : Noctuidae) in Australia: the effect of climate and crop host plants

Regression analyses of a long series of light-trap catches at Narrabri, Australia, were used to describe the seasonal dynamics of Helicoverpa armigera (Hubner). The size of the second generation was significantly related to the size of the first generation, to winter rainfall, which had a positive effect, and to spring rainfall which had a negative effect. These variables accounted for up to 96% of the variation in size of the second generation from year to year. Rainfall and crop hosts were also important for the size of the third generation. The area and tonnage of many potential host crops were significantly correlated with winter rain. When winter rain was omitted from the analysis, the sizes of both the second and third generations could be expressed as a function of the size of the previous generation and of the areas planted to lucerne, sorghum and maize. Lucerne and maize always had positive coefficients and sorghum a negative one. We extended our analysis to catches of H. punctigera (Wallengren), which declines in abundance after the second generation. Winter rain had a positive effect on the sizes of the second and third generations, and rain in spring or early summer had a negative effect. Only the area grown to lucerne had a positive effect on abundance. Forecasts of pest levels from a few months to a few weeks in advance are discussed, along with the improved understanding of the seasonal dynamics of both species and the significance of crops in the management of insecticide resistance for H. armigera.

Identity and genetic diversity of the sorghum ergot pathogen in Australia

Sorghum ergot was first discovered in Australia in 1996. It affects seed production and grain usage in stock feed due to concerns of animal toxicity. Three species of Claviceps are known to cause ergot of sorghum with different epidemiological, animal toxicity, and management implications. Claviceps africana was identified as the causal agent but morphological differences between isolates raised the possibility of more than one species being involved. The major aim of this study was to identify the Claviceps species causing sorghum ergot and to determine the genetic diversity among isolates of the ergot pathogen from Australia and overseas. Symptom development, sequencing of the ITS1 region, and radiolabelled DNA amplification fingerprints (RAF) were used to confirm that ergot of sorghum in Australia is caused by C. africana. The morphology of sphacelia, microconidia, macroconidia, and secondary conidia of all 36 Australian isolates studied matched the description for C. africana and the DNA sequence of the ITS1 region of 2 selected Australian isolates was identical to that of C. africana. Based on RAF analysis of 110 Australian and overseas isolates of Claviceps spp., C. africana isolates could be clearly distinguished (

Mycoflora and fumonisin contamination in Brazilian sorghum from sowing to harvest

BACKGROUND: The aim of this study was to characterise the mycoflora and the presence of fumonisin in sorghum grains, correlating the results with the environment and abiotic factors. RESULTS: Fifty samples (five collections of ten samples each) of sorghum were analysed. All samples were found to be contaminated with fungi, with higher frequencies of Cladosporium spp. (61.8%) and Helminthosporium spp. (33.4%). Fusarium verticillioides was isolated from 15.1% of the samples, with 38% of them being contaminated with fumonisin B(1) (FB(1)) at levels ranging from 50 to 368.78 ng g(-1). Regarding abiotic factors, temperature, water activity and rainfall showed a positive correlation with the frequency of F. verticillioides and FB(1) production. There was a significant positive correlation between relative air humidity and FB(1) production. The results obtained from sexual crosses between standard F mating tester strains and the isolated strains confirmed that the strains isolated were F. verticillioides. CONCLUSION: It can be concluded that the decrease in F. verticillioides and fumonisin contamination occurred owing to atypical climatic factors during the period of sorghum cultivation, when there was any occurrence of rain and the level of water activity of grains did not reach 0.58. (C) 2010 Society of Chemical Industry

Respostas biométricas e fotossintética de plantas de milho a Pratylenchus spp. e avaliação da resistência de genótipos de milho e sorgo a esses nematóides e a Meloidogyne spp

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Lixiviação de sulfentrazone e amicarbazone com adição de óleo em resposta à precipitação e emergência de Ipomea spp. em função da profundidade de semeadura e cobertura com palha

Pós-graduação em Agronomia (Produção Vegetal) - FCAV

Microcollinearity between autopolyploid sugarcane and diploid sorghum genomes

Abstract Background Sugarcane (Saccharum spp.) has become an increasingly important crop for its leading role in biofuel production. The high sugar content species S. officinarum is an octoploid without known diploid or tetraploid progenitors. Commercial sugarcane cultivars are hybrids between S. officinarum and wild species S. spontaneum with ploidy at ~12×. The complex autopolyploid sugarcane genome has not been characterized at the DNA sequence level. Results The microsynteny between sugarcane and sorghum was assessed by comparing 454 pyrosequences of 20 sugarcane bacterial artificial chromosomes (BACs) with sorghum sequences. These 20 BACs were selected by hybridization of 1961 single copy sorghum overgo probes to the sugarcane BAC library with one sugarcane BAC corresponding to each of the 20 sorghum chromosome arms. The genic regions of the sugarcane BACs shared an average of 95.2% sequence identity with sorghum, and the sorghum genome was used as a template to order sequence contigs covering 78.2% of the 20 BAC sequences. About 53.1% of the sugarcane BAC sequences are aligned with sorghum sequence. The unaligned regions contain non-coding and repetitive sequences. Within the aligned sequences, 209 genes were annotated in sugarcane and 202 in sorghum. Seventeen genes appeared to be sugarcane-specific and all validated by sugarcane ESTs, while 12 appeared sorghum-specific but only one validated by sorghum ESTs. Twelve of the 17 sugarcane-specific genes have no match in the non-redundant protein database in GenBank, perhaps encoding proteins for sugarcane-specific processes. The sorghum orthologous regions appeared to have expanded relative to sugarcane, mostly by the increase of retrotransposons. Conclusions The sugarcane and sorghum genomes are mostly collinear in the genic regions, and the sorghum genome can be used as a template for assembling much of the genic DNA of the autopolyploid sugarcane genome. The comparable gene density between sugarcane BACs and corresponding sorghum sequences defied the notion that polyploidy species might have faster pace of gene loss due to the redundancy of multiple alleles at each locus.

Identity and pathogenicity of Fusarium spp. Isolated from wheat fields in Queensland and northern New South Wales

To establish the identity of Fusarium species associated with head blight (FHB) and crown rot (CR) of wheat, samples were collected from wheat paddocks with different cropping history in southern Queensland and northern New South Wales during 2001. CR was more widespread but FHB was only evident in northern NSW and often occurred with CR in the same paddock. Twenty different Fusarium spp. were identified from monoconidial isolates originating from different plant parts by using morphology and species-specific PCR assays. Fusarium pseudograminearum constituted 48% of all isolates and was more frequently obtained from the crown, whereas Fusarium graminearum made up 28% of all isolates and came mostly from the head. All 17 Fusarium species tested caused FHB and all 10 tested caused CR in plant infection assays, with significant (P < 0.001) difference in aggressiveness among species and among isolates within species for both diseases. Overall, isolates from stubble and crown were more aggressive for CR, whereas isolates from the flag leaf node were more aggressive for FHB. Isolates that were highly aggressive in causing CR were those originating from paddocks with wheat following wheat, whereas those from fields with wheat following maize or sorghum were highly aggressive for FHB. Although 20% of isolates caused severe to highly severe FHB and CR, there was no significant (P < 0.32) correlation between aggressiveness for FHB and CR. Given the ability of F. graminearum to colonise crowns in the field and to cause severe CR in bioassays, it is unclear why this pathogen is not more widely distributed in Australia.