Distribution and systematics of the freshwater genus Sirodotia (Batrachospermales, Rhodophyta) in North America

Multivariate morphometrics and image analysis were used to determine the number of well-delineated infrageneric taxa of Sirodotia in North America. Three groupings were distinguished from 25 populations examined from Newfoundland and Quebec in the north to central Mexico in the south. These groupings were statistically related to 10 type specimens, and the following species were recognized: Sirodotia huillensis (Welwitsch ex W. et G. S. West) Skuja (syn. S. ateleia Skuja), S. suecica Kylin (syn. S. acuminata Skuja ex Flint and S. fennica Skuja), and S. tenuissima (Collins) Skuja ex Flint. These species are differentiated on the basis of whorl shape and degree of separation at maturity (S. suecica, rounded and appressed; S. huillensis and S. tenuissima, truncated apex and separated), the density of spermatangia (S. huillensis, dense clusters, S. suecica and S. tenuissima, sparsely aggregated), and the mode of germination of the gonimoblast initial (S. suecica and S. tenuissima,from the nonprotuberant side of the fertilized carpogonium; S. huillensis from the protuberant side). Sirodotia huillensis was found only in the desert-chaparral, whereas S. suecica and S. tenuissima occurred from south-temperate to boreal regions in cool (temperature 8-18-degrees-C), low ion (specific conductance 10-99 muS.cm-1), and mildly acidic to neutral (pH 5.7-7.3) waters.

Daily dynamics of photosynthesis of the freshwater red alga Sirodotia delicatula (Batrachospermales, Rhodophyta)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Phylogenetic relationship of Sirodotia species (Batrachospermales, Rhodophyta) in North and South America

Sequence data from the RUBISCO large subunit (rbcL) plastid gene and nuclear small-subunit ribosomal DNA (SSU rDNA) were examined for five samples of Sirodotia delicatula from southeastern Brazil. Data from six North American samples previously identified as S. huillensis and S. suecica were also included in the analysis. Molecular data supported the continued recognition of these three species as separate entities, although one of the North American collections was misidentified. These results were shown to be congruent with morphology, chromosome number and geographic distribution. S. delicatula is more closely related to S. huillensis, both occurring in tropical-subtropical regions, than either to S. suecica with a temperate-boreal distribution. There was little rbcL variation within S. delicatula from Brazil and Costa Rica (the latter a collection previously identified as S. huillensis), with the six samples sequenced diverging from each other by 0-8 bp (0-0.67%). SSU rDNA data set did not provide sufficient resolution to infer phylogenetic relationships among the species of this group due to the low rates of variation (5 bp). Sirodotia was a well-supported clade (100% bootstrap or 1.00 a posteriori probability) based on rbcL sequences. Thus, the results confirm that Sirodotia is a monophyletic group within the Batrachospermales and we continue to recognize it at the generic level. The species S. delicatula, S. huillensis and S. suecica are morphologically and genetically distinct.

THE SECTION SIRODOTIA OF BATRACHOSPERMUM (RHODOPHYTA, BATRACHOSPERMACEAE) IN BRAZIL

The taxonomy, distribution and ecology of Section Sirodotia of Batrachospermum in Brazil is studied. Only one species, B. delicatulum (SKUJA) NECCHI & ENTWISLE, was recognized. This species presents a wide range of morphological features, occurs in a number of distinct habitats and environmental conditions and is widely distributed in Brazil. A full account of the species taxonomy is given and the synonyMy of B. ateleium comb. nov. SKUJA is confirmed. Two growth forms (dense and open) were found in the Brazilian specimens, but they were not treated as different taxa because a continuous range was observed between them. Two morphological features were proposed for species delineation: early development of gonimoblast and presence of specialized spermatangial branches. Three distinct groups of Sirodotia species can be recognized on the basis of these criterions: B. delicatulum (gonimoblast initial arises from a semiglobular protuberance of the carpogonium), B. suecicalum KYLIN (gonimoblast initial arises from the non-protuberant side of the carpogonium) and B. segawae KUMANO and B. yutakae KUMANO (with specialized spermatangial branches).

Ecology and morphological characterization of gametophyte and 'Chantransia' stages of Sirodotia huillensis (Batrachospermales, Rhodophyta) from a stream in central Mexico

The morphology and phenology of Sirodotia huillensis was evaluated seasonally in a central Mexican first-order calcareous stream. Water temperature was constant (24-25°C) and pH circumneutral to alkaline (6.7-7.9), and calcium and sulfates were the dominant ions. The gametophyte stages were characterized by the presence of a distinctive mucilaginous layer, a marked difference in phycocyanin to phycoerythrin ratio between female and male plants, and the presence of a carpogonia with a large trichogyne (>60 μm). Occasionally three capogonia were observed on a single basal cell. The 'Chantransia' stages were morphologically similar to those described for the other members of Batrachospermales. A remarkable observation was the formation of dome-shaped structures, consisting of prostrate filaments that are related with the development of new gametophytes. Chromosome numbers were n = 4 for fascicle cells, cortical filament cells and dome-shaped cells, and 2n = 8 for gonimoblast filament cells and 'Chantransia' stage filaments. Gametophytes and 'Chantransia' stages occurred in fast current velocities (60-170 cm/s) and shaded (33.1-121 μmol photons/m2/s) stream segments. The population fluctuated throughout the study period in terms of percentage cover and frequency: the 'Chantransia' stages were most abundant in the rainy season, whereas gametophytic plants had the highest frequency values during the dry season. These results were most likely a result of fluctuations in rainfall and related changes in current velocity. Some characteristics of this population can be viewed as probable adaptations to high current velocities: the mucilaginous layer around plants that reduces drag; potential increase in fertilization by the elongate and plentiful trichogynes and abundant dome-shaped structures producing several gametophytes.

Phylogeography of the freshwater red alga Sirodotia (Batrachospermales, Rhodophyta) in Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Bostrychia tenuissima; Rhodomelaceae

Bostrychia tenuissima King & Puttock, determined by Puttock 1988

Selaginellaceae Willk. no estado de São Paulo, Brasil

O presente trabalho trata do levantamento florístico da família Selaginellaceae Willk. no Estado de São Paulo. De acordo com os dados obtidos, foi possível o reconhecimento de 14 espécies nativas, distribuídas em três subgêneros: Heterostachys Baker, Stachygynandrum (P. Beauv.) Baker e Tetragonostachys Jermy. Os subgêneros Heterostachys e Tetragonostachys estão representados no Estado por uma única espécie cada, Selaginella muscosa Spring e Selaginella sellowii Hieron., respectivamente. O subgênero Stachygynandrum está representado por 12 espécies: Selaginella contigua Baker, S. convoluta (Arn.) Spring, S. decomposita Spring, S. flexuosa Spring, S. macrostachya (Spring) Spring, S. marginata (Humb. & Bonpl. ex Willd.) Spring, S. mendoncae Hieron., S. microphylla (Kunth) Spring, S. suavis (Spring) Spring, S. sulcata (Desv. ex Poir.) Spring, S. tenuissima Fée e S. valida Alston. Selaginella mendoncae e Selaginella sellowii estão sendo citadas pela primeira vez para o Estado de São Paulo. Além dessas 14 espécies nativas, também foram encontradas quatro espécies introduzidas - Selaginella kraussiana (Kunze) A. Braun, S. pallescens (C. Presl) Spring, S. plana (Desv. ex Poir.) Hieron. e S. vogelii Spring. São apresentadas chaves de identificação e descrições para os subgêneros e espécies, bem como ilustrações, distribuição geográfica e comentários das espécies estudadas.

A REAPPRAISAL OF GENERIC AND SUBGENERIC CLASSIFICATION IN THE BATRACHOSPERMACEAE (RHODOPHYTA)

The generic and subgeneric classification of the family Batrachospermaceae (Rhodophyta) has long been recognized as ambiguous and often inconsistent. One of the prime features used to delineate sections of Batrachospermum, trichogyne shape, is variable even within given species. However, characters associated with the carposporophyte and the carpogonial branch, as well as carpogonial symmetry, are practical and consistent taxonomic criteria. These features have been used to redefine sectional delineation in Batrachospermum. Based on phylogenetic reasoning and practicality, it is proposed that the three genera Nothocladus, Sirodotia and Tuomeya be reduced to sectional level within Batrachospermum. The genus Batrachospermum would thus become the sole member of the Batrachospermaceae and would include two subgenera, Batrachospermum and Acarposporophytum, the former with nine clearly defined sections (Aristata, Batrachospermum, Contorta, Hybrida, Nothocladus (Skuja) stat. nov., Sirodotia (Kylin) stat. nov., Tuomeya (Harvey) stat. nov., Turficola and Viridia). As a result, the following nomenclatural changes are proposed: Batrachospermum lindaueri (Skuja) comb. nov., B. nodosum (Skuja) comb. nov., B. delicatulum (Skuja) comb. nov., B. fennicum (Skuja) comb. nov., B. suecicum (Kylin) comb. nov. and B. americanum (Kutzing) comb. nov.

Microhabitat and plant structure of Batrachospermum (Batrachospermales, Rhodophyta) populations in four streams of São Paulo State, southeastern Brazil

Microhabitat and plant structure of seven Batrachospermum populations (four of Batrachospermum delicatulum (= Sirodotia delicatula), one of Batrachospermum macrosporum and two of the 'Chantransia' stage), including the influence of physical variables (current velocity, depth, irradiance and substratum), were investigated in four streams of São Paulo State, southeastern Brazil. The populations of B. delicatulum and the 'Chantransia' stage occurred under very diverse microhabitat conditions, which probably contributes to their wide spatial and seasonal distribution in Brazilian streams. Results suggest branch reconfiguration as a probable mechanism of adaptation to current velocity based on the occurrence of: (i) B. macrosporum (a large mucilaginous form with presumably little ability for branch reconfiguration) under lower current velocity than B. delicatulum; (ii) only dense plants in populations with high current velocities (> 60 cm s-1), whereas 53-77% of dense plants were seen in populations exposed to lower currents (< 40 cm s-1); (iii) positive correlations of plant length with internode length in populations under low current velocities and negative correlation in a population with high velocity (132 cm s-1); and (iv) negative correlations of current velocity with plant diameter and internode length in a population under high flow. This study, involving mainly dioecious populations, revealed that B. delicatulum displayed higher fertilization rates than B. macrosporum. A complementary explanation for a dioecious species to increase fertilization success was proposed consisting of outcrossing among intermingled male and female adjacent plants within an algal spot.

Macroalgas lóticas do Parque Nacional Chapada dos Veadeiros e arredores (GO): levantamento florístico e distribuição ecológica das comunidades

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Filogeografia de duas espécies de Rhodophyta da ordem Batrachospermales no Brasil

Pós-graduação em Microbiologia - IBILCE

Macroalgae of a stream in southeastern Brazil: composition, seasonal variation and relation to physical and chemical variables

Macroalgal seasonality was studied monthly in a second-order stream in the north-west of São Paulo State, S.E. Brazil. Seasonal variation was based on frequency and percentage cover. Seven species were found during the study period, three of which ('Chantransia' stage of Sirodotia delicatula, Homoeothrix juliana and Klebsormidium subtile) were encountered throughout the year and showed well-defined seasonal patterns as well as the highest value of frequency and percentage cover. 'Chantransia' and H. juliana dominated in summer and fall, while for K. subtile winter was the most favourable period. The remaining species (Oscillatoria agardhii, Microcoleus subtorulosus, Oedogonium sp. and Chaetophora elegans) had no clear seasonal pattern, in addition to their low values of frequency and percentage cover. Individually, K. subtile correlated with higher number of physical and chemical variables (oxygen, pH, precipitation, temperature, daylength, conductance and turbidity) than 'Chantransia' and H. juliana (discharge and depth). Principal component analyses revealed that no single variable was responsible for the macroalgal seasonal dynamics. The variables most closely related to seasonal variation of the macroalgal community were daylength, precipitation, discharge, turbidity and dissolved oxygen. Precipitation and flow were suggested as key factors in determining seasonality of the macroalgae. © 1991 Kluwer Academic Publishers.

Study of Italian isolates of Alternaria spp.: molecular and morphological characterization and pathogenesis on apple tree

It was decided to carry out a morphological and molecular characterization of the Italian Alternaria isolatescollected from apple , and evaluate their pathogenicity and subsequently combining the data collected. The strain collection (174 isolates) was constructed by collecting material (received from extension service personnel) between June and August of 2007, 2008, and 2009. A Preliminary bioassays were performed on detached plant materials (fruit and leaf wounded and unwounded), belonging to the Golden cultivar, with two different kind of inoculation (conidial suspension and conidial filtrate). Symptoms were monitored daily and a value of pathogenicity score (P.S.) was assigned on the basis of the diameter of the necrotic area that developed. On the basis of the bioassays, the number of isolates to undergo further molecular analysis was restricted to a representative set of single spore strains (44 strains). Morphological characteristics of the colony and sporulation pattern were determined according to previous systematic work on small-spored Alternaria spp. (Pryor and Michaelides, 2002 and Hong et al., 2006). Reference strains (Alternaria alternata, Alternaria tenuissima, Alternaria arborescens and four Japanese strains of Alternaria alternata mali pathotype), used in the study were kindly provided by Prof. Barry Pryor, who allows a open access to his own fungal collection. Molecular characterization was performed combining and comparing different data sets obtained from distinct molecular approach: 1) investigation of specific loci and 2) fingerprinting based on diverse randomly selected polymorphic sites of the genome. As concern the single locus analysis, it was chosen to sequence the EndoPG partial gene and three anonymous region (OPA1-3, OPA2- and OPa10-2). These markers has revealed a powerful tool in the latter systematic works on small-spored Alternaria spp. In fact, as reported in literature small-spored Alternaria taxonomy is complicated due to the inability to resolve evolutionary relationships among the taxa because of the lack of variability in the markers commonly used in fungi systematic. The three data set together provided the necessary variation to establish the phylogenetic relationships among the Italian isolates of Alternaria spp. On Italian strains these markers showed a variable number of informative sites (ranging from 7 for EndoPg to 85 for OPA1-3) and the parsimony analysis produced different tree topologies all concordant to define A. arborescens as a mophyletic clade. Fingerprinting analysis (nine ISSR primers and eight AFLP primers combination) led to the same result: a monophyleic A. arborescens clade and one clade containing both A. tenuissima and the A. alternata strains. This first attempt to characterize Italian Alternaria species recovered from apple produced concordant results with what was already described in a similar phylogenetic study on pistachio (Pryor and Michaelides, 2002), on walnut and hazelnut (Hong et al., 2006), apple (Kang et al., 2002) and citurus (Peever et al., 2004). Together with these studies, this research demonstrates that the three morphological groups are widely distributed and occupy similar ecological niches. Furthermore, this research suggest that these Alternaria species exhibit a similar infection pattern despite the taxonomic and pathogenic differences. The molecular characterization of the pathogens is a fundamental step to understanding the disease that is spreading in the apple orchards of the north Italy. At the beginning the causal agent was considered as Alteraria alternata (Marshall and Bertagnoll, 2006). Their preliminary studies purposed a pathogenic system related to the synthesis of toxins. Experimental data of our bioassays suggest an analogous hypothesis, considering that symptoms could be induced after inoculating plant material with solely the filtrate from pathogenic strains. Moreover, positive PCR reactions using AM-toxin gene specific primers, designed for identification of apple infecting Alternaria pathovar, led to a hypothesis that a host specific toxin (toxins) were involved. It remains an intriguing challenge to discover or not if the agent of the “Italian disease” is the same of the one previously typified as Alternaria mali, casual agent of the apple blotch disease.