Ação imunomodulatória da β-glucana e Saccharomyces cerevisiae em ratos (Rattus rattus) da linhagem Wistar imunossuprimidos pela administração experimental de dexametasona

Pós-graduação em Medicina Veterinária - FCAV

Produção de resíduos sólidos de matérias-primas amiláceas na fabricação de bioetanol para analise de segurança em alimentação de ratos Wistar

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Desempenho e características da carcaça e da carne de novilhos não-castrados alimentados com ou sem adição de monensina e/ou probiótico à dieta

O objetivo do estudo foi avaliar o desempenho e as características da carcaça e da carne de novilhos não-castrados alimentados com ou sem adição de monensina (M) e/ou probiótico (P) (Sacharomyces cerevisiae) à dieta. Os animais foram distribuídos em baias individuais, permanecendo 145 dias em confinamento. A dieta foi composta de silagem de milho e 1,2% do peso vivo de concentrado com base da matéria natural. Não houve efeito da adição dos aditivos fornecidos de forma isolada ou mesmo da associação destes sobre o consumo de alimento, o ganho de peso e a conversão alimentar. As médias de consumo, ganho de peso e conversão alimentar apresentaram comportamento quadrático com o avanço do período de confinamento. Embora a adição de M ou P à dieta tenha resultado no aumento numérico (P>0,05) do consumo (4,2%), a média de ganho de peso reduziu (5,8 e 5,3%, respectivamente), resultando em pior conversão alimentar (P>0,05). Já a associação de M+P aumentou (P>0,05) o consumo em 9,5%, com concomitante aumento (P>0,05) do ganho de peso (6,4%) em relação à dieta controle. Os animais alimentados com M+P apresentaram melhor acabamento de carcaça (5,5mm), seguidos por aqueles do grupo controle (4,7mm), sendo os valores inferiores verificados nas carcaças dos animais M (3,7mm) e P (3,5mm). A adição de monensina e/ou probiótico (Sacharomyces cerevisiae) na dieta de novilhos na fase de terminação em confinamento não proporciona melhora no desempenho e nas características da carcaça e da carne de novilhos.

Avaliação do processo de produção de etanol pela fermentação do caldo de mandiocaba (Manihot esculenta Crantz)

Foram realizadas determinações físico-químicas na raiz de mandiocaba, sendo estas: umidade, fibras, proteínas, cinzas, lipídios totais, açúcares redutores e totais; o caldo foi caracterizado através das análises de pH, sólidos solúveis totais, glicose e acidez titulável. Após o conhecimento dos constituintes físico-químicos da matéria-prima, o caldo de mandioca doce foi extraído e fermentado utilizando a levedura Saccharomycescerevisiae PE-2. Foram realizados 15 ensaios que seguiam as condições determinadas através do planejamento experimental de Box-Behnken, com 3 variáveis independentes: temperatura (ºC) (X1), pH (X2), e concentração de inóculo (g/L) (X3); os limites dos níveis de trabalho foram determinados através de dados encontrados na literatura; a análise estatística foi realizada com p>0,05. Através da análise de variância foi proposto um modelo polinomial de segunda ordem para a resposta teor alcoólico (ºGl), e com a utilização da metodologia de superfície de resposta à condição ótima para o desenvolvimento do processo fermentativo do caldo de mandioca doce sem adição de nutrientes e em sua concentração de substrato original (6,46 g/L), a: temperatura de 28ºC, pH de 4,88, e concentração de inóculo de 10 g/L. Nestas condições foi realizado um ensaio, cujo objetivo foi o de levantar as curvas de crescimento celular (levedura), produção de CO₂, consumo de açúcares redutores e produção de etanol, para melhor compreensão do processo de fermentação do caldo de mandioca doce. Através da curva de crescimento celular foi determinada a duração da fase exponencial, utilizando o método de regressão linear; neste estudo esta etapa ocorreu em diferentes intervalos de tempo. O valor de µm encontrado foi de 0,05 h^-1.

Tolerância de isolados de levedura a elevadas temperaturas e baixo potencial osmótico.

Este trabalho teve por objetivo avaliar a tolerância de isolados de levedura para aplicação no controle biológico de podridões pós-colheita de frutos em elevadas temperaturas e baixa disponibilidade de água. As leveduras foram inoculadas em meio de cultivo líquido contendo um gradiente de concentrações de polietilenoglicol 6000 de forma a alcançar potenciais osmóticos de 0 Mpa, -2 Mpa, -5 Mpa, -10 Mpa, -15, -20 Mpa, e incubados em BOD nas temperaturas de 15 °C, 20 °C, 25 °C, 30 °C, 35 °C e 40 °C. A partir da análise das curvas de crescimento obtidas, verificou-se que os isolados Sacharomyces sp. L10 e S. boulardi L7K apresentaram a maior suscetibilidade aos estresses abióticos, com crescimento próximo à zero nas condições restritivas de cultivo. O isolado Sacharomyces cerevisiae LF apresentou a maior tolerância à combinação dos fatores analisados, seguido de Pichia kudriavzevii L9, demonstrando maior potencial para aplicação em condições de campo para a prevenção de infecções de patógenos quiescentes.

Suplementação alimentar com Saccharomyces cerevisiae na inflamação induzida por Aeromonas lydrophila em tilápias do nilo (Oreochromis niloticus)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

The Saccharomyces cerevisiae RNA-binding protein Rbp29 functions in cytoplasmic mRNA metabolism

Here we report that the Saccharomyces cerevisiae RBP29 (SGN1, YIR001C) gene encodes a 29-kDa cytoplasmic protein that binds to mRNA in vivo. Rbp29p can be co-immunoprecipitated with the poly(A) tail-binding protein Pab1p from crude yeast extracts in a dosageand RNA-dependent manner. In addition, recombinant Rbp29p binds preferentially to poly(A) with nanomolar binding affinity in vitro. Although RBP29 is not essential for cell viability, its deletion exacerbates the slow growth phenotype of yeast strains harboring mutations in the eIF4G genes TIF4631 and TIF4632. Furthermore, overexpression of RBP29 suppresses the temperaturesensitive growth phenotype of specific tif4631, tif4632, and pab1 alleles. These data suggest that Rbp29p is an mRNA-binding protein that plays a role in modulating the expression of cytoplasmic mRNA.

Functional dissection of alternative secretory pathways in the yeast S. cerevisiae

Eukaryotic cells are characterized by having a subset of internal membrane compartments, each one with a specifi c identity, structure and function. Proteins destined to be targeted to the exterior of the cell need to enter and progress through the secretory pathway. Transport of secretory proteins from the endoplasmic reticulum (ER) to the Golgi takes place by the selective packaging of proteins into COPII-coated vesicles at the ER membrane. Taking advantage of the extensive genetic tools available for S. cerevisiae we found that Hsp150, a yeast secretory glycoprotein, selectively exited the ER in the absence of any of the three Sec24p family members. Sec24p has been thought to be an essential component of the COPII coat and thus indispensable for exocytic membrane traffic. Next we analyzed the ability of Hsp150 to be secreted in mutants, where post-Golgi transport is temperature sensitive. We found that Hsp150 could be selectively secreted under conditions where the exocyst component Sec15p is defective. Analysis of the secretory vesicles revealed that Hsp150 was packaged into a subset of known secretory vesicles as well as in a novel pool of secretory vesicles at the level of the Golgi. Secretion of Hsp150 in the absence of Sec15p function was dependent of Mso1p, a protein capable of interacting with vesicles intended to fuse with the plasma membrane, with the SNARE machinery and with Sec1p. This work demonstrated that Hsp150 is capable of using alternative secretory pathways in ER-to-Golgi and Golgi-to-plasma membrane traffi c. The sorting signals, used at both stages of the secretory pathway, for secretion of Hsp150 were different, revealing the highly dynamic nature and spatial organization of the secretory pathway. Foreign proteins usually misfold in the yeast ER. We used Hsp150 as a carrier to assist folding and transport of heterologous proteins though the secretory pathway to the culture medium in both S. cerevisiae and P. pastoris. Using this technique we expressed Hsp150Δ-HRP and developed a staining procedure, which allowed the visualization of the organelles of the secretory pathway of S. cerevisiae.

Engineering the pentose phosphate pathway of Saccharomyces cerevisiae for production of ethanol and xylitol

The baker s yeast Saccharomyces cerevisiae has a long tradition in alcohol production from D-glucose of e.g. starch. However, without genetic modifications it is unable to utilise the 5-carbon sugars D-xylose and L arabinose present in plant biomass. In this study, one key metabolic step of the catabolic D-xylose pathway in recombinant D-xylose-utilising S. cerevisiae strains was studied. This step, carried out by xylulokinase (XK), was shown to be rate-limiting, because overexpression of the xylulokinase-encoding gene XKS1 increased both the specific ethanol production rate and the yield from D xylose. In addition, less of the unwanted side product xylitol was produced. Recombinant D-xylose-utilizing S. cerevisiae strains have been constructed by expressing the genes coding for the first two enzymes of the pathway, D-xylose reductase (XR) and xylitol dehydrogenase (XDH) from the D-xylose-utilising yeast Pichia stipitis. In this study, the ability of endogenous genes of S. cerevisiae to enable D-xylose utilisation was evaluated. Overexpression of the GRE3 gene coding for an unspecific aldose reductase and the ScXYL2 gene coding for a xylitol dehydrogenase homologue enabled growth on D-xylose in aerobic conditions. However, the strain with GRE3 and ScXYL2 had a lower growth rate and accumulated more xylitol compared to the strain with the corresponding enzymes from P. stipitis. Use of the strictly NADPH-dependent Gre3p instead of the P. stipitis XR able to utilise both NADH and NADPH leads to a more severe redox imbalance. In a S. cerevisiae strain not engineered for D-xylose utilisation the presence of D-xylose increased xylitol dehydrogenase activity and the expression of the genes SOR1 or SOR2 coding for sorbitol dehydrogenase. Thus, D-xylose utilisation by S. cerevisiae with activities encoded by ScXYL2 or possibly SOR1 or SOR2, and GRE3 is feasible, but requires efficient redox balance engineering. Compared to D-xylose, D-glucose is a cheap and readily available substrate and thus an attractive alternative for xylitol manufacture. In this study, the pentose phosphate pathway (PPP) of S. cerevisiae was engineered for production of xylitol from D-glucose. Xylitol was formed from D-xylulose 5-phosphate in strains lacking transketolase activity and expressing the gene coding for XDH from P. stipitis. In addition to xylitol, ribitol, D-ribose and D-ribulose were also formed. Deletion of the xylulokinase-encoding gene increased xylitol production, whereas the expression of DOG1 coding for sugar phosphate phosphatase increased ribitol, D-ribose and D-ribulose production. Strains lacking phosphoglucose isomerase (Pgi1p) activity were shown to produce 5 carbon compounds through PPP when DOG1 was overexpressed. Expression of genes encoding glyceraldehyde 3-phosphate dehydrogenase of Bacillus subtilis, GapB, or NAD-dependent glutamate dehydrogenase Gdh2p of S. cerevisiae, altered the cellular redox balance and enhanced growth of pgi1 strains on D glucose, but co-expression with DOG1 reduced growth on higher D-glucose concentrations. Strains lacking both transketolase and phosphoglucose isomerase activities tolerated only low D-glucose concentrations, but the yield of 5-carbon sugars and sugar alcohols on D-glucose was about 50% (w/w).

Effects of oxygen provision on the physiology of baker's yeast Saccharomyces cerevisiae

The availability of oxygen has a major effect on all organisms. The yeast Saccharomyces cerevisiae is able to adapt its metabolism for growth in different conditions of oxygen provision, and to grow even under complete lack of oxygen. Although the physiology of S. cerevisiae has mainly been studied under fully aerobic and anaerobic conditions, less is known of metabolism under oxygen-limited conditions and of the adaptation to changing conditions of oxygen provision. This study compared the physiology of S. cerevisiae in conditions of five levels of oxygen provision (0, 0.5, 1.0, 2.8 and 20.9% O2 in feed gas) by using measurements on metabolite, transcriptome and proteome levels. On the transcriptional level, the main differences were observed between the three level groups, 0, 0.5 2.8 and 20.9% O2 which led to fully fermentative, respiro-fermentative and fully respiratory modes of metabolism, respectively. However, proteome analysis suggested post-transcriptional regulation at the level of 0.5 O2. The analysis of metabolite and transcript levels of central carbon metabolism also suggested post-transcriptional regulation especially in glycolysis. Further, a global upregulation of genes related to respiratory pathways was observed in the oxygen-limited conditions and the same trend was seen in the proteome analysis and in the activities of enzymes of the TCA cycle. The responses of intracellular metabolites related to central carbon metabolism and transcriptional responses to change in oxygen availability were studied. As a response to sudden oxygen depletion, concentrations of the metabolites of central carbon metabolism responded faster than the corresponding levels of gene expression. In general, the genome-wide transcriptional responses to oxygen depletion were highly similar when two different initial conditions of oxygen provision (20.9 and 1.0% O2) were compared. The genes related to growth and cell proliferation were transiently downregulated whereas the genes related to protein degradation and phosphate uptake were transiently upregulated. In the cultures initially receiving 1.0% O2, a transient upregulation of genes related to fatty acid oxidation, peroxisomal biogenesis, response to oxidative stress and pentose phosphate pathway was observed. Additionally, this work analysed the effect of oxygen on transcription of genes belonging to the hexose transporter gene family. Although the specific glucose uptake rate was highest in fully anaerobic conditions, none of the hxt genes showed highest expression in anaerobic conditions. However, the expression of genes encoding the moderately low affinity transporters decreased with the decreasing oxygen level. Thus it was concluded that there is a relative increase in high affinity transport in anaerobic conditions supporting the high uptake rate.

Positional Preferences of Polypurine/Polypyrimidine Tracts in Saccharomyces cerevisiae Genome: Implications for cis Regulation of Gene Expression

The complete genome of the baker's yeast S. cerevisiae was analyzed for the presence of polypurine/polypyrimidine (poly[pu/py]) repeats and their occurrences were classified on the basis of their location within and outside open reading frames (ORFs). The analysis reveals that such sequence motifs are present abundantly both in coding as well as noncoding regions. Clear positional preferences are seen when these tracts occur in noncoding regions. These motifs appear to occur predominantly at a unit nucleosomal length both upstream and downstream of ORFs. Moreover, there is a biased distribution of polypurines in the coding strands when these motifs occur within open reading frames. The significance of the biased distribution is discussed with reference to the occurrence of these motifs in other known mRNA sequences and expressed sequence tags. A model for cis regulation of gene expression is proposed based on the ability of these motifs to form an intermolecular triple helix structure when present within the coding region and/or to modulate nucleosome positioning via enhanced histone affinity when present outside coding regions.

Genetic studies of the PRP17 gene of Saccharomyces cerevisiae: a domain essential for function maps to a nonconserved region of the protein

The PRP17 gene product is required for the second step of pre-mRNA splicing reactions. The C-terminal half of this protein bears four repeat units with homology to the beta transducin repeat. Missense mutations in three temperature-sensitive prp17 mutants map to a region in the N-terminal half of the protein. We have generated, in vitro, 11 missense alleles at the beta transducin repeat units and find that only one affects function in vivo. A phenotypically silent missense allele at the fourth repeat unit enhances the slow-growing phenotype conferred by an allele at the third repeat, suggesting an interaction between these domains. Although many missense mutations in highly conserved amino acids lack phenotypic effects, deletion analysis suggests an essential role for these units. Only mutations in the N-terminal nonconserved domain of PRP17 are synthetically lethal in combination with mutations in PRP16 and PRP18, two other gene products required for the second splicing reaction. A mutually allele-specific interaction between Prp17 and snr7, with mutations in U5 snRNA, was observed. We therefore suggest that the functional region of Prp17p that interacts with Prp18p, Prp16p, and U5 snRNA is the N terminal region of the protein.

An extragenic suppressor of prp24-1 defines genetic interaction between PRP24 and PRP21 gene products of Saccharomyces cerevisiae

The temperature-sensitive prp24-1 mutation defines a gene product required for the first step in pre-mRNA splicing. PRP24 is probably a component of the U6 snRNP particle. We have applied genetic reversion analysis to identify proteins that interact with PRP24. Spontaneous revertants of the temperature-sensitive (ts) prp24-1 phenotype were analyzed for those that are due to extragenic suppression. We then extended our analysis to screen for suppressors that confer a distinct conditional phenotype. We have identified a temperature-sensitive extragenic suppressor, which was shown by genetic complementation analysis to be allelic to prp21-1. This suppressor, prp21-2, accumulates pre-mRNA at the non-permissive temperature, a phenotype similar to that of prp21-1. prp21-2 completely suppresses the splicing defect and restores in vivo levels of the U6 snRNA in the prp24-1 strain. Genetic analysis of the suppressor showed that prp21-2 is not a bypass suppressor of prp24-1. The suppression of prp24-1 by prp21-2 is gene specific and also allele specific with respect to both the loci. Genetic interactions with other components of the pre-spliceosome have also been studied. Our results indicate an interaction between PRP21, a component of the U2 snRNP, and PRP24, a component of the U6 snRNP. These results substantiate other data showing U2-U6 snRNA interactions.