Scalable Visualization of Galaxies, Oceans, and Brains

One of the challenges in scientific visualization is to generate software libraries suitable for the large-scale data emerging from tera-scale simulations and instruments. We describe the efforts currently under way at SDSC and NPACI to address these challenges. The scope of the SDSC project spans data handling, graphics, visualization, and scientific application domains. Components of the research focus on the following areas: intelligent data storage, layout and handling, using an associated “Floor-Plan” (meta data); performance optimization on parallel architectures; extension of SDSC’s scalable, parallel, direct volume renderer to allow perspective viewing; and interactive rendering of fractional images (“imagelets”), which facilitates the examination of large datasets. These concepts are coordinated within a data-visualization pipeline, which operates on component data blocks sized to fit within the available computing resources. A key feature of the scheme is that the meta data, which tag the data blocks, can be propagated and applied consistently. This is possible at the disk level, in distributing the computations across parallel processors; in “imagelet” composition; and in feature tagging. The work reflects the emerging challenges and opportunities presented by the ongoing progress in high-performance computing (HPC) and the deployment of the data, computational, and visualization Grids.

When oceans meet: a teleost shows secondary intergradation at an Indian-Pacific interface

The Indo-West Pacific is characterized by extraordinary marine species diversity. The evolutionary mechanisms responsible for generating this diversity remain puzzling, but are often linked to Pleistocene sea level fluctuations. The impact of these sea level changes on the population genetic architecture of the estuarine fish Lates calcarifer are investigated via a natural experiment in a region of the Indo-West Pacific known to have undergone considerable change during the Pleistocene. L. calcarifer, a coastline-restricted catadromous teleost, provides an excellent model for studying the effects of sea level change as its habitat requirements potentially make it sensitive to the region's physical history. Evidence was found for a large phylogenetic break (4% mtDNA control region; 0.47% ATPase 6 and 8) either side of the Torres Strait, which separates the Western Pacific and Indian Oceans, although some mixing of the clades was evident. This suggests clinal secondary introgression of the clades via contemporary gene flow. Further, populations on Australia's east coast appear to have passed through a bottleneck. This was linked to the historical drying of the Great Barrier Reef coastal lagoon, which resulted in a significant loss of habitat and forced retreat into isolated refugia. These results suggest that historical eustatic changes have left a significant imprint on the molecular diversity within marine species as well as among them in the Indo-West Pacific.

El mercuri s'ha triplicat als nostres oceans

L"ACTIVITAT INDUSTRIAL INCLOU PROCESSOS molt diversos que sovint generen productes potencialment contaminants, que s"han estat abocant al medi ambient amb més o menys control des de l"inici de la Revolució Industrial. Alguns d"aquests productes poden ser reciclats pels mateixos cicles naturals, geoquímics i biològics, però d"altres es van acumulant, com és el cas del mercuri. Un estudi publicat a la revista Nature, encapçalat per Carl H. Lamborg, de la Woods Hole Oceanographic Institution de Massachusetts, als EUA, indica que la quantitat de mercuri als oceans s"ha triplicat des de la Revolució Industrial i, malgrat que el nivell actual encara és raonablement lluny de ser considerat tòxic per a les persones, pot començar a alterar els ecosistemes marins. A més, com assenyalen els autors del treball, la capacitat dels oceans per dissoldre el mercuri acumulat es podria estar esgotant, la qual cosa implicaria que, si no es prenen mesures que evitin els abocaments incontrolats, el seu ritme de penetració dins els ecosistemes i, a la llarga, en l"alimentació humana, podria augmentar de manera exponencial.

Memoirs of the Mexican Revolution : including a narrative of the expedition of General Xavier Mina. To which are annexed some observations on the practicability of opening a commerce between the Pacific and Atlantic oceans, through the Mexican isthmus, in the province of Oaxaca, and at the Lake of Nicaragua; and the vast importance of such commerce to the civilized world.

UANL

Sea Surface Temperature-Convection Relationship in Tropical Oceans with Special Emphasis to Intraseasonal Variability of Indian Summer Monsoon

The SST convection relation over tropical ocean and its impact on the South Asian monsoon is the first part of this thesis. Understanding the complicated relation between SST and convection is important for better prediction of the variability of the Indian monsoon in subseasonal, seasonal, interannual, and longer time scales. Improved global data sets from satellite scatterometer observations of SST, precipitation and refined reanalysis of global wind fields have made it possible to do a comprehensive study of the SST convection relation. Interaction of the monsoon and Indian ocean has been discussed. A coupled feedback process between SST and the Active-Break cycle of the Asian summer monsoon is a central theme of the thesis. The relation between SST and convection is very important in the field of numerical modeling of tropical rainfall. It is well known that models generally do very well simulating rainfall in areas of tropical convergence zones but are found unable to do satisfactory simulation in the monsoon areas. Thus in this study we critically examined the different mechanisms of generation of deep convection over these two distinct regions.The study reported in chapter 3 has shown that SST - convection relation over the warm pool regions of Indian and west Pacific oceans (monsoon areas) is in such a way that convection increases with SST in the SST range 26-29 C and for SST higher than 29-30 C convection decreases with increase of SST (it is called Waliser type). It is found that convection is induced in areas with SST gradients in the warm pool areas of Indian and west Pacific oceans. Once deep convection is initiated in the south of the warmest region of warm pool, the deep tropospheric heating by the latent heat released in the convective clouds produces strong low level wind fields (Low level Jet - LLJ) on the equatorward side of the warm pool and both the convection and wind are found to grow through a positive feedback process. Thus SST through its gradient acts only as an initiator of convection. The central region of the warm pool has very small SST gradients and large values of convection are associated with the cyclonic vorticity of the LLJ in the atmospheric boundary layer. The conditionally unstable atmosphere in the tropics is favorable for the production of deep convective clouds.

POST-MONSOON SEA SURFACE TEMPERATURE AND CONVECTION ANOMALIES OVER INDIAN AND PACIFIC OCEANS

We have studied sea surface temperature (SST) anomalies over the Indian and Pacific Oceans (domain 25 °S to 25°N and 40 °E to 160 °W) during the three seasons following the Indian summer monsoon for wet monsoons and also for dry monsoons accompanied or not by El Ni˜no. A dry monsoon is followed by positive SST anomalies in the longitude belt 40 to 120 °E, negative anomalies in 120 to 160 °E and again positive anomalies east of 160 °E. In dry monsoons accompanied by El Ni˜no the anomalies have the same sign, but are much stronger. Wet monsoons have weak anomalies of opposite sign in all three of the longitude belts. Thus El Ni˜no and a dry monsoon have the same types of association with the Indian and Pacific Ocean SSTs. In the sector 40 to 120 °E SST anomalies first appear over the western part of the Indian Ocean (June to September) followed by the same sign of anomalies over its eastern part and China Sea (October to March). By March after a dry monsoon or El Ni˜no the Indian Ocean between 10 °N and 10 °S has a spatially large warm SST anomaly. Anomalies in deep convection tend to follow the SST anomalies, with warm SST anomalies producing positive convection anomalies around the seasonal location of the intertropical convergence zone

SST–convection relation over tropical oceans

According to current knowledge, convection over the tropical oceans increases with sea surface temperature (SST) from 26 to 29 °C, and at SSTs above 29 °C, it sharply decreases. Our research shows that it is only over the summer warm pool areas of Indian and west Pacific Oceans (monsoon areas) where the zone of maximum SST is away from the equator that this kind of SST-convection relationship exists. In these areas (1) convection is related to the SST gradient that generates low-level moisture convergence and upward vertical motion in the atmosphere. This has modelling support. Regions of SST maxima have low SST gradients and therefore feeble convection. (2) Convection initiated by SST gradient produces strong wind fields particularly cross-equatorial low-level jetstreams (LLJs) on the equator-ward side of the warm pool and both the convection and LLJ grow through a positive feedback process. Thus, large values of convection are associated with the cyclonic vorticity of the LLJ in the atmospheric boundary layer. In the inter-tropical convergence zone (ITCZ) over the east Pacific Ocean and the south Pacific convergence zone (SPCZ) over the west Pacific Ocean, low-level winds from north and south hemisphere converge in the zone of maximum SST, which lies close to the equator producing there elongated bands of deep convection, where we find that convection increases with SST for the full range of SSTs unlike in the warm pool regions. The low-level wind divergence computed using QuikSCAT winds has large and significant linear correlation with convection in both the warm pool and ITCZ/SPCZ areas. But the linear correlation between SST and convection is large only for the ITCZ/SPCZ. These findings have important implications for the modelling of largescale atmospheric circulations and the associated convective rainfall over the tropical oceans

Oceans Deep: Lesson G (March of The Polar Bears)

Teacher resources for Lesson G in the Discover Oceanography 'Scheme of Work' for use in schools.