Evaluation of cacao (Theobroma cacao L.) clones against seven Colombian isolates of Moniliophthora roreri (Cif.) Evans et al., representing four major genetic groupings of the pathogen in cacao

Artificial pod inoculation was used to compare the relative aggressiveness of seven Colombian isolates of Moniliophthora roreri (the causal agent of moniliasis or frosty pod disease), representing four major genetic groupings of the pathogen in cacao (cocoa), when applied to five diverse cacao genotypes (ICS-1, ICS-95, TSH-565, SCC-61 and CAP-34) at La Suiza Experimental Farm, Santander Department, Colombia. The following variables were evaluated 9 weeks after inoculation of 2- to 3-month-old pods with spore suspensions (1.2 x 10(5) spores mL(-1)): (i) disease incidence (DI); (ii) external severity (ES); and (iii) internal severity (IS). IS was found to be of greatest value in classifying the reaction of the host genotype against M. roreri. Genetic variation reported between isolates and cacao genotypes was not matched by similar diversity in their aggressiveness. All isolates were generally highly aggressive against most cacao genotypes, with only two isolates showing reduced IS and ES reactions. There was considerable variation between clones in the IS and ES scores, but one cultivated clone (ICS-95) displayed a significant level of resistance against all seven isolates. This clone may be useful in cacao breeding initiatives for resistance to moniliasis of cacao.

Estrutura genética de populações de Crinipellis perniciosa e Moniliophthora roreri utilizando marcadores RAPD e SSR

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Estrutura da população e epidemiologia de Moniliophthora roreri no Magdalena Medio Colombiano

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Evaluación in vitro de hongos nativos antagonistas de Moniliophthora rereri (Cif. & Par., Evans et al.,) en el cultivo de cacao (Theobroma cacao L.)

El cacao es afectado por una diversidad de microorganismos patógenos, entre ellos el hongo Moniliophthora roreri (Cif. & Par., Evans et al.,) causante de la moniliasis, que es una de las enfermedades de mayor importancia de este cultivo. El uso irracional de plaguicidas sintéticos para el manejo de esta enfermedad ha generado problemas al agroecosistema y la salud humana, por lo que se está demandando el uso de alternativas agroecológicas. En este contexto, el objetivo principal de esta investigación fue generar información acerca de la capacidad antagónica in vitro mostrada por hongos nativos contra la moniliasis del cacao. Se recolectaron muestras de suelo, hojas, corteza, frutos sanos y enfermos en tres zonas cacaoteras de Nicaragua para la caracterización morfológica del patógeno y de los potenciales microorganismos antagonistas. Las pruebas de antagonismo “in vitro” se realizaron a través de la técnica del cultivo dual. Se evaluó el crecimiento radial del patógeno y de los antagonistas, el porcentaje de inhibición del crecimiento radial (PICR) del patógeno y la capacidad de control biológico de los hongos antagonistas. Se probaron cuatro técnicas para la conservación de los hongos antagonistas. Se obtuvieron cuatro aislados del patógeno M. roreri y 17 aislados de hongos antagonistas. El PICR del patógeno ejercida por aislados del antagonista Trichoderma varió de 40.13% a 46.77%, en los aislados del antagonista Paecilomyces el PICR osciló entre 59.38% y 67.43%, en el único aislado del antagonista Clonostachys el PICR fue de 62.33%-67.22%. Los 17 aislados se ubicaron en las clases 1, 2 y 3 de la escala de valoración de antagonismo. La mejor técnica de conservación de hongos antagonistas y de M. roreri fue la de conservación con glicerol. Los resultados de este estudio indican que en el agroecosistema de cacao existen microorganismos nativos que tienen potencial para ser usados como agentes de control biológico del patógeno M. roreri.

Análise do risco de ocorrência da monilíase em cacaueiro no Brasil face às mudanças climáticas globais

The aim of this study was to evaluate the potential risk of moniliasis occurrence and the impacts of climate change on this disease in the coming decades, should this pathogen be introduced in Brazil. To this end, climate favorability maps were devised for the occurrence of moniliasis, both for the present and future time. The future scenarios (A2 and B2) focused on the decades of 2020, 2050 and 2080. These scenarios were obtained from six global climate models (GCMs) made available by the third assessment report of Intergovernmental Panel on Climate Change (IPCC). Currently, there are large areas with favorable climate conditions for moniliasis in Brazil, especially in regions at high risk of introduction of that pathogen. Considering the global warming scenarios provided by the IPCC, the potential risk of moniliasis occurrence in Brazil will be reduced. This decrease is predicted for both future scenarios, but will occur more sharply in scenario A2. However, there will still be areas with favorable climate conditions for the development of the disease, particularly in Brazil's main producing regions. Moreover, pathogen and host alike may undergo alterations due to climate change, which will affect the extent of their impacts on this pathosystem.

A qualitative host-pathogen interaction in the Theobroma cacao-Moniliophthora perniciosa pathosystem

The aim of this study was to test whether resistance of clones of Theobroma cacao ( cocoa) varied between isolates of Moniliophthora (formerly Crinipellis) perniciosa, the cause of witches' broom disease. Developing buds of vegetatively propagated T. cacao grown in greenhouses in the UK were inoculated with 16 000 spores of M. perniciosa per meristem in water, under conditions where water condensed on the inoculated shoot for at least 12 h after inoculation. The proportion of successful inoculations varied between clones and was inversely correlated with time to symptom production or broom formation. A specific interaction was demonstrated among three single-spore isolates of M. perniciosa and the clone Scavina 6 (SCA 6) and a variety of susceptible clones. Isolates Castenhal-I and APC3 were equally likely to infect SCA 6 and the other clones, but isolate Gran Couva A9 never infected SCA 6, although it was as virulent on the other clones. The interaction was maintained when the wetness period was extended to 70 h. Offspring of SCA 6 x Amelonado matings were all susceptible to both Castenhal-I and GC-A5, with no evidence of greater variability in susceptibility to GC-A5 than Castanhal-I. This suggests recessive inheritance of a single homozygous factor conferring resistance to GC-A5, from SCA 6. The progenies were slightly more susceptible to Castanhal-I than GC-A5. The implications for managing the disease are discussed.

A new topology of ACBP from Moniliophthora perniciosa

Acyl-CoA binding protein (ACBP) is a housekeeping protein and is an essential protein in human cell lines and in Trypanosoma brucei. The ACBP of Moniliophthora perniciosa is composed of 104 amino acids and is possibly a non-classic isoform exclusively from Basidiomycetes. The M. perniciosa acbp gene was cloned, and the protein was expressed and purified. Acyl-CoA ester binding was analyzed by isoelectric focusing, native gel electrophoresis and isothermal titration calorimetry. Our results suggest an increasing affinity of ACBP for longer acyl-CoA esters, such as myristoyl-CoA to arachidoyl-CoA, and best fit modeling indicates two binding sites. ACBP undergoes a shift from a monomeric to a dimeric state, as shown by dynamic light scattering, fluorescence anisotropy and native gel electrophoresis in the absence and presence of the ligand. The protein`s structure was determined at 1.6 angstrom resolution and revealed a new topology for ACBP, containing five a-helices instead of four. alpha-helices 1, 2, 3 and 4 adopted a bundled arrangement that is unique from the previously determined four-helix folds of ACBP, while alpha-helices 1, 2, 4 and 5 formed a classical four-helix bundle. A MES molecule was found in the CoA binding site, suggesting that the CoA site could be a target for small compound screening. (C) 2009 Elsevier B.V. All rights reserved.

Controle biológico de Moniliophthora perniciosa, agente causal da vassoura de bruxa do cacaueiro, por diferentes espécies e linhagens de Trichoderma spp

Pós-graduação em Ciências Biológicas (Microbiologia Aplicada) - IBRC

Genetic diversity of polysporic isolates of Moniliophthora perniciosa (Tricholomataceae)

The causal agent of witches' broom disease, Moniliophthora perniciosa is a hemibiotrophic and endemic fungus of the Amazon basin and the most important cocoa disease in Brazil. The purpose of this study was to analyze the genetic diversity of polysporic isolates of M. perniciosa to evaluate the adaptation of the pathogen from different Brazilian regions and its association with different hosts. Polysporic isolates obtained previously in potato dextrose agar cultures of M. perniciosa from different Brazilian states and different hosts (Theobroma cacao, Solanum cernuum, S. paniculatum, S. lycocarpum, Solanum sp, and others) were analyzed by somatic compatibility grouping where the mycelium interactions were distinguished after 4-8 weeks of confrontation between the different isolates of M. perniciosa based on the precipitation line in the transition zone and by protein electrophoresis through SDS-PAGE. The diversity of polysporic isolates of M. perniciosa was grouped according to geographic proximity and respective hosts. The great genetic diversity of M. perniciosa strains from different Brazilian states and hosts favored adaptation in unusual environments and dissemination at long distances generating new biotypes.

Purification, characterization and structural determination of chitinases produced by Moniliophthora perniciosa

The enzyme chitinase from Moniliophthora perniciosa the causative agent of the witches' broom disease in Theobroma cacao, was partially purified with ammonium sulfate and filtration by Sephacryl S-200 using sodium phosphate as an extraction buffer. Response surface methodology (RSM) was used to determine the optimum pH and temperature conditions. Four different isoenzymes were obtained: ChitMp I, ChitMp II, ChitMp III and ChitMp IV. ChitMp I had an optimum temperature at 44-73ºC and an optimum pH at 7.0-8.4. ChitMp II had an optimum temperature at 45-73ºC and an optimum pH at 7.0-8.4. ChitMp III had an optimum temperature at 54-67ºC and an optimum pH at 7.3-8.8. ChitMp IV had an optimum temperature at 60ºC and an optimum pH at 7.0. For the computational biology, the primary sequence was determined in silico from the database of the Genome/Proteome Project of M. perniciosa, yielding a sequence with 564 bp and 188 amino acids that was used for the three-dimensional design in a comparative modeling methodology. The generated models were submitted to validation using Procheck 3.0 and ANOLEA. The model proposed for the chitinase was subjected to a dynamic analysis over a 1 ns interval, resulting in a model with 91.7% of the residues occupying favorable places on the Ramachandran plot and an RMS of 2.68.

Avaliação do óleo essencial de Piper marginatum sobre Moniliophthora perniciosa, causador da vassoura-de-bruxa no cupuaçuzeiro.

O cupuaçu (Theobroma grandiflorum) é um dos frutos com potencial econômico na região Amazônica, e um dos principais problemas que vêm diminuindo a produção no Amazonas é a vassoura-de-bruxa, causada por Moniliophythora perniciosa, reduzindo em até 60% a produção. O objetivo deste trabalho foi avaliar o efeito do óleo essencial de Piper marginatum na inibição do crescimento micelial e na germinação de esporos do fungo in vitro.

Transcriptomics and systems biology analysis in identification of specific pathways involved in cacao resistance and susceptibility to witches' broom disease

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Fungos endofíticos e epifíticos associados às folhas de cacaueiro

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Agroecosystem resilience and farmers’ perceptions of climate change impacts on cocoa farms in Alto Beni, Bolivia

Cocoa-based small-scale agriculture is the most important source of income for most farming families in the region of Alto Beni in the sub-humid foothills of the Andes. Cocoa is grown in cultivation systems of varying ecological complexity. The plantations are highly susceptible to climate change impacts. Local cocoa producers mention heat waves, droughts, floods and plant diseases as the main impacts affecting plants and working conditions, and they associate these impacts with global climate change. From a sustainable regional development point of view, cocoa farms need to become more resilient in order to cope with the climate change related effects that are putting cocoa-based livelihoods at risk. This study assesses agroecosystem resilience under three different cocoa cultivation systems (successional agroforestry, simple agroforestry and common practice monocultures). In a first step, farmers’ perceptions of climate change impacts were assessed and eight indicators of agroecological resilience were derived in a transdisciplinary process (focus groups and workshop) based on farmers’ and scientists’ knowledge. These indicators (soil organic matter, depth of Ah horizon, soil bulk density, tree species diversity, crop varieties diversity, ant species diversity, cocoa yields and infestation of cocoa trees with Moniliophthora perniciosa) were then surveyed on 15 cocoa farms and compared for the three different cultivation systems. Parts of the socio-economic aspects of resilience were covered by evaluating the role of cocoa cooperatives and organic certification in transitioning to more resilient cocoa farms (interviews with 15 cocoa farmers combined with five expert interviews). Agroecosystem resilience was higher under the two agroforestry systems than under common practice monoculture, especially under successional agroforestry. Both agroforestry systems achieved higher cocoa yields than common practice monoculture due to agroforestry farmers’ enhanced knowledge regarding cocoa cultivation. Knowledge sharing was promoted by local organizations facilitating organic certification. These organizations were thus found to enhance the social process of farmers’ integration into cooperatives and their reorientation toward organic principles and diversified agroforestry.

La contribución de la producción del cacao orgánico a la resiliencia socio-ecológica en el contexto del cambio climático en el Alto Beni – La Paz

El cultivo del cacao en pequeña escala, sustento básico de muchas familias del Alto Beni, es afectado por los impactos del cambio climático. Para el desarrollo sostenible, es necesario que las fincas adquieran resiliencia: la capacidad de un sistema para reducir su sensibilidad hacia factores de estrés y perturbaciones, manteniendo su productividad, capacidad auto-organizativa, de aprendizaje y adaptación al cambio. Investigamos las diferencias en la resiliencia entre las fincas orgánicas y no orgánicas de cacao, y los rasgos significativos que inciden en la resiliencia socio-ecológica de los sistemas agrícolas del cacao. Definimos indicadores de resiliencia con expertos locales y productores durante un taller y con grupos focales. Los indicadores de la capacidad de amortiguación fueron: materia orgánica de los suelos, densidad aparente del suelo, e infestación con Moniliophthora perniciosa, diversidad arbórea, diversidad de cultivos, hormigas y fuentes de ingresos de las familias productoras. Los indicadores de auto-organización fueron: afiliación a organizaciones productoras, nivel de subsistencia, rendimientos de cacao e ingreso familiar anual. La capacidad de adaptación se evaluó indagando la cantidad de capacitaciones en que participaron las familias y la cantidad de fuentes de información que poseían. Entrevistamos 52 hogares: 30 orgánicos, 22 no orgánicos. Las fincas orgánicas en el área eran más diversificadas y rendían más. El ingreso familiar anual de las fincas orgánicas era sustancialmente mayor al de las no orgánicas. Probablemente el mayor rendimiento se debió principalmente a que los productores orgánicos participaron en más capacitaciones debido a su pertenencia a las organizaciones locales. Concluimos que las organizaciones locales de agricultura orgánica contribuyeron a crear resiliencia proporcionando servicios de extensión mediante el establecimiento de parcelas, creación de capacidades y seguros sociales