Computational modeling aspects of photon transport equations in biological media

This paper presents an overview of modeling light propagation through biological media by solving the photon transport equation. Different variants of the photon transport equation (PTE) are discussed. Several methods for modeling static distributions and the transient response are presented. A discussion on how to mix and match electromagnetic problems with the PTE is also provided.

A hybrid approach for resolving the electromagnetic fields inside a waveguide loaded with a lossy medium

In this work a novel hybrid approach is presented that uses a combination of both time domain and frequency domain solution strategies to predict the power distribution within a lossy medium loaded within a waveguide. The problem of determining the electromagnetic fields evolving within the waveguide and the lossy medium is decoupled into two components, one for computing the fields in the waveguide including a coarse representation of the medium (the exterior problem) and one for a detailed resolution of the lossy medium (the interior problem). A previously documented cell-centred Maxwell’s equations numerical solver can be used to resolve the exterior problem accurately in the time domain. Thereafter the discrete Fourier transform can be applied to the computed field data around the interface of the medium to estimate the frequency domain boundary condition in-formation that is needed for closure of the interior problem. Since only the electric fields are required to compute the power distribution generated within the lossy medium, the interior problem can be resolved efficiently using the Helmholtz equation. A consistent cell-centred finite-volume method is then used to discretise this equation on a fine mesh and the underlying large, sparse, complex matrix system is solved for the required electric field using the iterative Krylov subspace based GMRES iterative solver. It will be shown that the hybrid solution methodology works well when a single frequency is considered in the evaluation of the Helmholtz equation in a single mode waveguide. A restriction of the scheme is that the material needs to be sufficiently lossy, so that any penetrating waves in the material are absorbed.

Self-induced transmission on intersubband resonance in multiple quantum wells

We investigate the nonlinear propagation of ultrashort pulses on resonant intersubband transitions in multiple semiconductor quantum wells. It is shown that the nonlinearity rooted from electron-electron interactions destroys the condition giving rise to self-induced transparency. However, by adjusting the area of input pulse, we find the signatures of self-induced transmission due to a full Rabi flopping of the electron density, and this phenomenon can be approximately interpreted by the traditional standard area theorem via defining the effective area of input pulse.

A study of nonlinear phenomena in the propagation of electromagnetic waves in a weakly ionized gas

This thesis is a study of nonlinear phenomena in the propagation of electromagnetic waves in a weakly ionized gas externally biased with a magnetostatic field. The present study is restricted to the nonlinear phenomena rising from the interaction of electromagnetic waves in the ionized gas. The important effects of nonlinearity are wave-form distortion leads to cross modulation of one wave by a second amplitude-modulated wave.

The nonlinear effects are assumed to be small so that a perturbation method can be used. Boltzmann’s kinetic equation with an appropriate expression for the collision term is solved by expanding the electron distribution function into spherical harmonics in velocity space. In turn, the electron convection current density and the conductivity tensors of the nonlinear ionized gas are found from the distribution function. Finally, the expression for the current density and Maxwell’s equations are employed to investigate the effects of nonlinearity on the propagation of electromagnetic waves in the ionized gas, and also on the reflection of waves from an ionized gas of semi-infinite extent.

Talbot effect of a grating with different kinds of flaws

The Talbot effect of a grating with different kinds of flaws is analyzed with the finite-difference time-domain (FDTD) method. The FDTD method can show the exact near-field distribution of different flaws in a high-density grating, which is impossible to obtain with the conventional Fourier transform method. The numerical results indicate that if a grating is perfect, its Talbot imaging should also be perfect; if the grating is distorted, its Talbot imaging will also be distorted. Furthermore, we evaluate high-density gratings by detecting the near-field distribution with the scanning near-field optical microscopy technique. Experimental results are also given. (c) 2005 Optical Society of America.

A priori error analysis of space–time Trefftz discontinuous Galerkin methods for wave problems

We present and analyse a space–time discontinuous Galerkin method for wave propagation problems. The special feature of the scheme is that it is a Trefftz method, namely that trial and test functions are solution of the partial differential equation to be discretised in each element of the (space–time) mesh. The method considered is a modification of the discontinuous Galerkin schemes of Kretzschmar et al. (2014) and of Monk & Richter (2005). For Maxwell’s equations in one space dimension, we prove stability of the method, quasi-optimality, best approximation estimates for polynomial Trefftz spaces and (fully explicit) error bounds with high order in the meshwidth and in the polynomial degree. The analysis framework also applies to scalar wave problems and Maxwell’s equations in higher space dimensions. Some numerical experiments demonstrate the theoretical results proved and the faster convergence compared to the non-Trefftz version of the scheme.

Análise de antenas de microfita com patches circulares sobre substratos anisotrópicos usando o método dos potenciais de Hertz

This work consists on the theoretical and numerical analysis of some properties of circular microstrip patch antennas on isotropic and uniaxial anisotropic substrates. For this purpose, a full wave analysis is performed, using Hertz Vector Potentials method in the Hankel Transform domain. In the numerical analysis, the moment method is also used in order to determine some characteristics of the antenna, such as: resonant frequency and radiation pattern. The definition of Hertz potentials in the Hankel domain is used in association with Maxwell´s equations and the boundary conditions of the structures to obtain the Green´s functions, relating the components of the current density on the patch and the tangential electric field components. Then, the Galerkin method is used to generate a matrix equation whose nontrivial solution is the complex resonant frequency of the structure. In the analysis, a microstrip antenna with only one isotropic dielectric layer is initially considered. For this structure, the effect of using superconductor patches is also analyzed. An analysis of a circular microstrip antenna on an uniaxial anisotropic dielectric layer is performed, using the Hertz vector potentials oriented along the optical axis of the material, that is perpendicular to the microstrip ground plane. Afterwards, the circular microstrip antenna using two uniaxial anisotropic dielectric layers is investigated, considering the particular case in which the inferior layer is filled by air. In this study, numerical results for resonant frequency and radiation pattern for circular microstrip antennas on isotropic and uniaxial anisotropic substrates are presented and compared with measured and calculated results found in the literature

Nova metodologia para análise e síntese de sistemas de aterramento complexos utilizando o método lN-FDTD, computação paralela automática e redes neurais artificiais

Neste trabalho, o método FDTD em coordenadas gerais (LN-FDTD) foi implementado para a análise de estruturas de aterramento com geometrias coincidentes ou não com o sistema de coordenadas cartesiano. O método soluciona as equações de Maxwell no domínio do tempo, permitindo a obtenção de dados a respeito da resposta transitória e de regime estacionário de estruturas diversas de aterramento. Uma nova formulação para a técnica de truncagem UPML em coordenadas gerais, para meios condutivos, foi desenvolvida e implementada para viabilizar a análise dos problemas (LN-UPML). Uma nova metodologia baseada em duas redes neurais artificiais é apresentada para a deteccão de defeitos em malhas de terra. O software FDTD em coordenadas gerais foi testado e validado para vários casos. Uma interface gráfica para usuários, chamada LANE SAGS, foi desenvolvida para simplificar o uso e automatizar o processamento dos dados.

Análise de tensões induzidas em linhas de distribuição de baixa tensão frente a uma descarga atmosférica

Neste trabalho são apresentadas simulações computacionais inéditas para o cálculo de tensões induzidas em linhas de baixa tensão provenientes de descargas atmosféricas em estações rádio-base de telefonia celular (ERBs). Foram construídas estruturas representativas que denotam um grau de complexidade bastante avançado e semelhante ao encontrado em campo, visando assim a obtenção o de resultados bem próximos aos da realidade. Para tal, desenvolveu-se um software, no qual as equações de Maxwell são resolvidas numericamente utilizando o Método das Diferenças Finitas no Domínio do Tempo (FDTD), associado à truncagem de domínio de análise pela técnica da UPML e representação de condutores elétricos pela formulação de fio fino para meios condutivos, gerando soluções de onda completa para o problema.

Análise eletromagnética de cabos OPGW utilizando métodos numérico e analítico

Este trabalho apresenta o estudo eletromagnético de cabos OPGW (Optical Ground Wire) os quais têm dupla função: de pára-raios para linhas de transmissão de alta tensão e de canal de comunicação através de fibras ópticas embutidas na estrutura do cabo. Descargas atmosféricas ou curtos-circuitos podem comprometer a integridade do cabo, devido ao aquecimento nas regiões onde há maior concentração de corrente. Para a análise deste problema foram feitos cálculos eletromagnéticos relacionando-os aos efeitos térmicos no cabo. Nesta análise foram consideradas três diferentes geometrias: o modelo de cabo real, o modelo de cabo com camadas homogêneas e o modelo de cabo com uma camada modificada; esta modificação está relacionada à forma geométrica dos fios da armação do cabo. As ferramentas utilizadas em tal estudo foram o software comercial FEMLAB Multiphysics, baseado no método dos elementos finitos, e um método analítico desenvolvido a partir das equações de Maxwell no domínio da freqüência, que foi implementado utilizando o software MATLAB. Os principais resultados deste trabalho são gráficos de distribuição de densidade de corrente na seção reta do cabo para diferentes freqüências, estudo do efeito pelicular e do efeito de proximidade entre os condutores do cabo.

Modelagem 1D e 2,5D de dados do método CSEM marinho em meios com anisotropia transversal inclinada

Neste trabalho apresentamos a solução do campo eletromagnético gerado por um dipolo elétrico horizontal em meios transversalmente isotrópicos com eixo de simetria vertical (TIV) e com eixo de simetria inclinado (TII). Para modelos unidimensionais, o campo eletromagnético foi obtido por duas metodologias distintas: (1) solução semi-analítica das equações de Maxwell com auxílio de potenciais vetores no caso TIV e (2) em modelos com anisotropia transversal inclinada o campo eletromagnético foi separado em primário e secundário, e então, o campo secundário foi calculado pelo método de elementos finitos no domínio (k_x, k_y, z) da transformada de Fourier. Para estruturas bidimensionais, foi aplicada a mesma metodologia usado nos modelos TII unidimensionais, onde o campo secundário foi calculado pelo método de elementos finitos no domínio (x, k_y, z), da transformada de Fourier, com a utilização de malhas não estruturadas para discretização dos modelos. Estas respostas foram usados para avaliar os efeitos da anisotropia elétrica nos dados CSEM marinho 1D e 2,5D.

Optical interface based on a nanofiber atom-trap

In this thesis, I present the realization of a fiber-optical interface using optically trapped cesium atoms, which is an efficient tool for coupling light and atoms. The basic principle of the presented scheme relies on the trapping of neutral cesium atoms in a two-color evanescent field surrounding a nanofiber. The strong confinement of the fiber guided light, which also protrudes outside the nanofiber, provides strong confinement of the atoms as well as efficient coupling to near-resonant light propagating through the fiber. In chapter 1, the necessary physical and mathematical background describing the propagation of light in an optical fiber is presented. The exact solution of Maxwell’s equations allows us to model fiber-guided light fields which give rise to the trapping potentials and the atom-light coupling in the close vicinity of a nanofiber. Chapter 2 gives the theoretical background of light-atom interaction. A quantum mechanical model of the light-induced shifts of the relevant atomic levels is reviewed, which allows us to quantify the perturbation of the atomic states due to the presence of the trapping light-fields. The experimental realization of the fiber-based atom trap is the focus of chapter 3. Here, I analyze the properties of the fiber-based trap in terms of the confinement of the atoms and the impact of several heating mechanisms. Furthermore, I demonstrate the transportation of the trapped atoms, as a first step towards a deterministic delivery of individual atoms. In chapter 4, I present the successful interfacing of the trapped atomic ensemble and fiber-guided light. Three different approaches are discussed, i.e., those involving the measurement of either near-resonant scattering in absorption or the emission into the guided mode of the nanofiber. In the analysis of the spectroscopic properties of the trapped ensemble we find good agreement with the prediction of theoretical model discussed in chapter 2. In addition, I introduce a non-destructive scheme for the interrogation of the atoms states, which is sensitive to phase shifts of far-detuned fiber-guided light interacting with the trapped atoms. The inherent birefringence in our system, induced by the atoms, changes the state of polarization of the probe light and can be thus detected via a Stokes vector measurement.

Subwavelength Bessel beams in wire media

Recent progress is emerging on nondiffracting subwavelength fields propagating in complex plasmonic nanostructures. In this paper, we present a thorough discussion on diffraction-free localized solutions of Maxwell’s equations in a periodic structure composed of nanowires. This self-focusing mechanism differs from others previously reported, which lie on regimes with ultraflat spatial dispersion. By means of the Maxwell–Garnett model, we provide a general analytical expression of the electromagnetic fields that can propagate along the direction of the cylinder’s axis, keeping its transverse waveform unaltered. Numerical simulations based on the finite element method support our analytical approach. In particular, moderate filling fractions of the metallic composite lead to nonresonant-plasmonic spots of light propagating with a size that remains far below the limit of diffraction.

Modeling collisional processes in plasmas using discontinuous numerical methods

Thesis (Ph.D.)--University of Washington, 2016-06

An FDTD model for calculation of gradient-induced eddy currents in MRI system

In most magnetic resonance imaging (MRI) systems, pulsed magnetic gradient fields induce eddy currents in the conducting structures of the superconducting magnet. The eddy currents induced in structures within the cryostat are particularly problematic as they are characterized by long time constants by virtue of the low resistivity of the conductors. This paper presents a three-dimensional (3-D) finite-difference time-domain (FDTD) scheme in cylindrical coordinates for eddy-current calculation in conductors. This model is intended to be part of a complete FDTD model of an MRI system including all RF and low-frequency field generating units and electrical models of the patient. The singularity apparent in the governing equations is removed by using a series expansion method and the conductor-air boundary condition is handled using a variant of the surface impedance concept. The numerical difficulty due to the asymmetry of Maxwell equations for low-frequency eddy-current problems is circumvented by taking advantage of the known penetration behavior of the eddy-current fields. A perfectly matched layer absorbing boundary condition in 3-D cylindrical coordinates is also incorporated. The numerical method has been verified against analytical solutions for simple cases. Finally, the algorithm is illustrated by modeling a pulsed field gradient coil system within an MRI magnet system. The results demonstrate that the proposed FDTD scheme can be used to calculate large-scale eddy-current problems in materials with high conductivity at low frequencies.