Managing Scholarly Communication in the Web 2.0 Environment: The Role of University Libraries

Scholarly communication over the past 10 to 15 years has gained a tremendous momentum with the advent of Internet and the World Wide Web. The web has transformed the ways by which people search, find, use and communicate information. Innovations in web technology since 2005 have brought out an array of new services and facilities and an enhanced version of the web named Web 2.0. Web 2.0 facilitates a collaborative environment in which the information users can interact with the information. Web 2.0 enables its users to create, annotate, review, share re-use and represent the information in new ways thereby optimizing the information dissemination

Automated scoring of AFLPs using RawGeno v 2.0, a free R CRAN library.

Amplified Fragment Length Polymorphisms (AFLPs) are a cheap and efficient protocol for generating large sets of genetic markers. This technique has become increasingly used during the last decade in various fields of biology, including population genomics, phylogeography, and genome mapping. Here, we present RawGeno, an R library dedicated to the automated scoring of AFLPs (i.e., the coding of electropherogram signals into ready-to-use datasets). Our program includes a complete suite of tools for binning, editing, visualizing, and exporting results obtained from AFLP experiments. RawGeno can either be used with command lines and program analysis routines or through a user-friendly graphical user interface. We describe the whole RawGeno pipeline along with recommendations for (a) setting the analysis of electropherograms in combination with PeakScanner, a program freely distributed by Applied Biosystems; (b) performing quality checks; (c) defining bins and proceeding to scoring; (d) filtering nonoptimal bins; and (e) exporting results in different formats.

CAPTools communications library (CAPLib) version 2.0-022

Abstract not available

The 2.0 angstrom crystal structure of a pocilloporin at pH 3.5: The structural basis for the linkage between color transition and halide binding

The pocilloporin Rtms5 and an engineered variant Rtms5(H146S) undergo distinct color transitions (from blue to red to yellow to colorless) in a pH-dependent manner. pK(a) values of 4.1 and 3.2 were determined for the blue (absorption lambda(max), 590 nm) to yellow (absorption lambda(max), similar to 453 nm) transitions of Rtms5 and Rtms5H(146). The pK(a) for the blue-yellow transition of Rtms5H(146S) increased by 1.4 U in the presence of 0.1 M KI, whereas the pK(a) for the same transition of Rtms5 was relatively insensitive to added halides. To understand the structural basis for these observations, we have determined to 2.0 A resolution the crystal structure of a yellow form of Rtms5(H146S) at pH 3.5 in the presence of iodide. Iodide was found occupying a pocket in the structure with a pH of 3.5, forming van der Waals contacts with the tyrosyl moiety of the chromophore. Elsewhere, it was determined that this pocket is occupied by a water molecule in the Rtms5(H141S) structure (pH 8.0) and by the side chain of histidine 146 in the wild-type Rtms5 structure. Collectively, our data provide an explanation for the observed linkage between color transitions for Rtms5(H146S) and binding to halides.

Experimental study of phase equilibria in the PbO-ZnO-"Fe2O3"-(CaO+SiO2) system in air for the lead and zinc blast furnace sinters (CaO/SiO2 weight ratio of 0.933 and PbO/(CaO+SiO2) ratios of 2.0 and 3.2)

Experimental studies on phase equilibria and liquidus in the multicomponent system PbO-ZnO-CaO-SiO2-FeO-Fe2O3 in air have been conducted over the temperature range between 1323 K (1050 degreesC) and 1623 K (1350 degreesC) to characterize the phase relations of the complex slag systems encountered in lead and zinc blast furnace sinters. The liquidus in two pseudoternary sections ZnO-Fe2O3-(PbO + CaO + SiO2) with the CaO/SiO2 weight ratio of 0.933 and PbO/(CaO + SiO2) weight ratios of 2.0 and 3.2 have been constructed.

Science 2.0 : The use of social networking in research.

REBIUN study on Science 2.0 and social web applications for research. There are three categories: share research, share resources and share results. Describes the applications and selected resources of interest: scientific social networks, scientific databases, research platforms, surveys, concept maps, file sharing, bibliographic management, social bookmarking, citation indexes, blogs and wikis, science news, open access. The services are evaluated and the report describes his interest to libraries.

MapFish. A WebGIS 2.0 Framework: toolkit to build rich client WebGIS

MapFish is an open-source development framework for building webmapping applications. MapFish is based on the OpenLayers API and the Geo extension of Ext library, and extends the Pylons general-purpose web development framework with geo-specific functionnalities. This presentation first describes what the MapFish development framework provides and how it can help developers implement rich web-mapping applications. It then demonstrates through real web-mapping realizations what can be achieved using MapFish : Geo Business Intelligence applications, 2D/3D data visualization, on/off line data edition, advanced vectorial print functionnalities, advanced administration suite to build WebGIS applications from scratch, etc. In particular, the web-mapping application for the UN Refugee Agency (UNHCR) and a Regional Spatial Data Infrastructure will be demonstrated

Biblioteca 2.0 : produção e organização do conhecimento na Internet

O objectivo principal deste trabalho de investigação é na análise do aproveitamento das potencialidades da tecnologia da Web 2.0 pelos profissionais de informação na gestão do conhecimento nas bibliotecas, especialmente nas universitárias, onde a utilização destas tecnologias se revela de extrema importância. Para enquadrar o estudo no âmbito da aplicação das tecnologias da Web 2.0 ao serviço da biblioteca foi analisado, em primeiro lugar, o impacto que o desenvolvimento tecnológico teve na sociedade e a globalização do saber originado pelo software social. Para complementar o estudo e verificar a gestão de uma das redes sociais, o Blogue, foi usado o método qualitativo, através da aplicação de uma grelha de avaliação da qualidade dos Blogues desenvolvida por Luísa Alvim. Os resultados obtidos da análise dos Blogues foram submetidos à observação dos princípios da Web 2.0, defendidos por Maness. Concluiu-se que as potencialidades do Blogue não são completamente exploradas pelos profissionais de informação, nem mesmo nas bibliotecas universitárias. Este estudo pretende fazer a análise da situação, mas também ser um ponto de partida para que os responsáveis das bibliotecas, especialmente das bibliotecas universitárias, repensem o conceito e mais-valia da Web 2.0, de forma a que o Blogue seja gerido estrategicamente em benefício do utilizador, profissionais de informação e do próprio serviço da biblioteca.

Research Blogging: Indexing and Registering the Change in Science 2.0

Increasing public interest in science information in a digital and 2.0 science era promotes a dramatically, rapid and deep change in science itself. The emergence and expansion of new technologies and internet-based tools is leading to new means to improve scientific methodology and communication, assessment, promotion and certification. It allows methods of acquisition, manipulation and storage, generating vast quantities of data that can further facilitate the research process. It also improves access to scientific results through information sharing and discussion. Content previously restricted only to specialists is now available to a wider audience. This context requires new management systems to make scientific knowledge more accessible and useable, including new measures to evaluate the reach of scientific information. The new science and research quality measures are strongly related to the new online technologies and services based in social media. Tools such as blogs, social bookmarks and online reference managers, Twitter and others offer alternative, transparent and more comprehensive information about the active interest, usage and reach of scientific publications. Another of these new filters is the Research Blogging platform, which was created in 2007 and now has over 1,230 active blogs, with over 26,960 entries posted about peer-reviewed research on subjects ranging from Anthropology to Zoology. This study takes a closer look at RB, in order to get insights into its contribution to the rapidly changing landscape of scientific communication.

New Morbidities 2.0

Robert Sanborn and Angelo Giardino's introduction for Volume 4, Issue 1: New Morbdities 2.0

Las funcionalidades Web 2.0 en la interface de usuario de los OPACs Web de Latinoamérica

Se presenta el proyecto de investigación aprobado y subsidiado en el marco de la Programación Científica UBACYT 2011-2014 sobre la problemática de las interfaces de usuario de los catálogos en línea de acceso público (OPACs) en entorno web de las bibliotecas nacionales, universitarias, especializadas y públicas de Latinoamérica, a fin de examinar las funcionalidades propias de las áreas de control de operaciones, formulación de la búsqueda y puntos de acceso, control de salida y asistencia al usuario, así como también las funcionalidades Web 2.0. Se adopta una metodología cuantitativa. Se plantea aplicar a una muestra representada por 102 unidades, extraída por muestreo aleatorio simple (de una población compuesta por 846 casos), la lista de funcionalidades que proporciona Hildreth (1982) actualizada; comparar, mediante un diseño experimental de muestras relacionadas, las variaciones producidas en cuanto a presencia/ausencia de funcionalidades y tipo de software adoptado en relación con la situación existente ya verificada en investigaciones previas; identificar, a partir de la observación de las interfaces de los OPACs que constituyen la muestra, la presencia/ausencia de funcionalidades Web 2.0; utilizar para ello como instrumento de recolección la lista de funcionalidades deseables en los OPACs 2.0 confeccionada por Margaix-Arnal (2007); aplicar diferentes pruebas estadísticas para describir las características de la interface de usuario de los OPACs Web de la región a partir del supuesto de que ha aumentado el uso de Sistemas Integrados de Gestión Bibliotecaria y la presencia de funcionalidades en aquellas unidades que han adoptado estos sistemas, aunque carecen aún de funcionalidades 2.0.

Los usos de la red social Facebook por parte de bibliotecas universitarias argentinas : Reflexiones en torno a las dinámicas comunicativas en la Web 2.0

El presente artículo analiza la adopción y los principales usos de la plataforma Facebook por parte de las bibliotecas de tres universidades en Argentina. Luego de una revisión bibliográfica sobre la temática, se exponen los procedimientos metodológicos empleados para identificar, en primer lugar, las instituciones que cuentan con esta herramienta de comunicación en la actualidad y, en segundo término, los usos que se hace de ella a partir de una serie de variables, entre las que caben consignar: el momento de inicio, los vínculos con otros medios de comunicación administrados por la institución (webs y redes sociales), el número de seguidores, el empleo de las imágenes, la frecuencia y el tipo de posteos y, por último, la cantidad y la calidad de los comentarios. En los resultados se trabaja la información recabada procurando un análisis cuantitativo y otro cualitativo en la construcción de un panorama global. En las conclusiones se destaca la paulatina adopción de la plataforma por parte de las bibliotecas universitarias, aunque con usos limitados respecto de su potencial. Se sugieren otras posibilidades