Genetic variation among pathogens causing "Helminthosporium" diseases of rice, maize and wheat

Twenty isolates of four fungal species, agents of "Helminthosporium" diseases in cereals, were collected from different regions: nine Bipolarisoryzae isolated from rice (Oryza sativa), seven B.sorokiniana from wheat (Triticum aestivum), two B. maydis, and two Exserohilumturcicum from maize (Zea mays). The strains were compared by PCR-RFLP and RAPD analysis. Size polymorphism among the isolates in the ITS region comprising the 5.8 S rDNA indicated genetic differences among the isolates, while a UPGMA phenogram constructed after the digestion of this region with restriction enzymes showed inter- and intra-specific polymorphism. The RAPD profiles indicated an expressive level of polymorphism among different species, compared with a low level of polymorphism among isolates of the same species. A UPGMA phenogram grouped the isolates according to the species and their host plant. RAPD profiles did not reveal polymorphism that directly correlated climatic factors with geographic source of the isolates of B. sorokiniana, and B. oryzae. Teleomorphic species revealed high similarity with their correspondent anamorphs.

Genetics of resistance to the fungus Helminthosporium sativum in wheat: use of culture filtrates in tissue culture

Six wheat genotypes and their F1 and F2 generations were exposed to the action of Helminthosporium sativum culture filtrates to examine the genetics of hexaploid wheat resistance. The objective was to improve the efficiency of breeding programs by identifying the action and number of genes involved in the resistance. The varied response of the tested genotypes to the culture filtrates allowed division of the genotypes into four groups: resistant, moderately resistant, moderately susceptible and susceptible. This variability was detected in the progeny, suggesting that the parents have distinct genetic constitutions. Additive gene action predominated and genetic gain was shown to be possible through selection. The genetic control of the resistance trait seems to be complex because of the presence of gene interaction and the difficulty of eliminating the environmental effects. The inheritance seems to be oligogenic

Organization and expression of the double-stranded RNA genome of Helminthosporium victoriae 190S virus, a totivirus infecting a plant pathogenic filamentous fungus.

The complete nucleotide sequence, 5178 bp, of the totivirus Helminthosporium vicotoriae 190S virus (Hv190SV) double-stranded RNA, was determined. Computer-assisted sequence analysis revealed the presence of two large overlapping ORFs; the 5'-proximal large ORF (ORF1) codes for the coat protein (CP) with a predicted molecular mass of 81 kDa, and the 3'-proximal ORF (ORF2), which is in the -1 frame relative to ORF1, codes for an RNA-dependent RNA polymerase (RDRP). Unlike many other totiviruses, the overlap region between ORF1 and ORF2 lacks known structural information required for translational frameshifting. Using an antiserum to a C-terminal fragment of the RDRP, the product of ORF2 was identified as a minor virion-associated polypeptide of estimated molecular mass of 92 kDa. No CP-RDRP fusion protein with calculated molecular mass of 165 kDa was detected. The predicted start codon of the RDRP ORF (2605-AUG-2607) overlaps with the stop codon (2606-UGA-2608) of the CP ORF, suggesting RDRP is expressed by an internal initiation mechanism. Hv190SV is associated with a debilitating disease of its phytopathogenic fungal host. Knowledge of its genome organization and expression will be valuable for understanding its role in pathogenesis and for potential exploitation in the development of biocontrol measures.

Airborne fungi in the city of Porto Alegre, Rio Grande do Sul, Brazil

Knowledge of anemophilous fungi in a given city or region is important for the ecological diagnosis and specific treatment of allergic manifestations induced by inhaled allergens. In order to diagnose the presence of anemophilous fungi, several qualitative and quantitative techniques are used depending on the study place. This study of fungal air spores was performed with a Rotorod Sampler®, an equipment which samples the air through a plastic rod attached to an electric engine that makes it spin fast enough to collect the particles in the air. The samples were collected once a week during 24 hours using the standard cycle of the manufacturers. A total of 52 samples were obtained from April 2000 through March 2001. The results revealed prevalence of ascosporos (50.49%), Cladosporium (17.86%), Aspergillus/Penicillium (15.03%), basidiosporos (3.84%), rusts (3.82%), and Helminthosporium (2.49%), and a lesser frequency of Botrytis (1.22%), Alternaria (1.19%), smuts (0.90%), Curvularia (0.87%), Nigrospora (0.61%), and Fusarium (0.08%). Also, 1.59% of the spores detected here could not be identified by the systematic key used. More fungal spores were observed during the summer than during the autumn.

Detection of drechslera avenae in oat seeds

The fungus Drechslera avenae, the causal agent of Helminthosporium leaf spot on oats (Avena sativa), survives as mycelium in crop residues and in infected seeds. In trials carried out in the laboratory, ten methods were evaluated for their efficiency to detect D. avenae in oat seeds. In each experiment, groups of two or three methods were compared to a standard protocol, in which seeds were placed in Petri dishes containing the Reis selective medium and incubated at 25±2 °C for ten days. Data were submitted to analysis of variation and the means of the methods were compared using the Dunnett test at the 5% significance level. Overall, the highest levels of seed infection by D. avenae were observed on oat seeds plated in the osmotic, the oat-agar and the Reis media, or on seeds subjected to heat treatment previous to incubation in malt-agar. Therefore, these methods should be recommended for detection of D. avenae in oat seed testing.

Ocorrência de Bipolaris maydis causando mancha foliar em Paspalum atratum cv. Pojuca no Brasil

Bipolaris maydis was consistently isolated from infected Paspalum atratum cv. Pojuca plants showing leaf spot symptoms in the Cerrado of Brazil, in 2002. Pathogenicity tests under greenhouse conditions and subsequent reisolations of B. maydis from artificially inoculated Pojuca seedlings confirmed the hypothesis that this fungus was the causal agent of the disease. Symptoms of leaf spot appeared four days after inoculation in 100% of the inoculated Pojuca plants. All seven species of grasses evaluated were susceptible to B. maydis. The occurrence of leaf spot of Pojuca caused by B. maydis is reported for the first time in Brazil.

Semi-selective culture medium for Exserohilum turcicum isolation from corn seeds

Northern corn leaf blight, caused by Exserohilum turcicum (Et), is a disease of widespread occurrence in regions where corn, sweetcorn and popcorn are grown. This disease has great potential to cause damage and has been studied for years, but the association of its causal agent with seeds remains unconfirmed. Thus, the availability of a sensitive method to detect and quantify the inoculum in seeds, even at low incidence, is essential. The aim of this study was to develop a method to detect and quantify the presence of the fungus infecting and infesting corn and popcorn seeds. Artificially and naturally infected seeds were employed to develop the medium. The semi-selective medium was composed of carbendazim (active ingredient) (60 mg/L), captan (30 mg/L), streptomycin sulfate (500 mg/L) and neomycin sulfate (600 mg/L) aggregated to the medium lactose casein hydrolysate agar medium. By using this, Et was detected in naturally infected corn seeds, showing 0.124% incidence, in four out of ten analyzed samples. In addition, 1.04 conidia were detected per infested seed. By means of isolation, pathogenicity test, morphological characterization and comparison with descriptions of the species in the literature, the fungus isolated from the seeds was confirmed to be Et. Both infection and infestation were considered low; thus, for studies of Et detection in corn seeds, the use of semi-selective medium and more than 1,200 seeds/sample is suggested.

Fungicide baseline for mycelial sensitivity of Exserohilum turcicum, causal agent of northern corn leaf blight

Northern corn leaf blight, caused by Exserohilum turcicum(Et), is one of the major corn diseases which can reduce grain yield and quality. The aim of this study was to determine the mycelial sensitivity of ten Etisolates, five from Argentina and five from Brazil, to six fungicides (carbendazim, captan, fludioxinil, metalaxyl, iprodione and thiram) used in seed treatment. The inhibitory concentration (IC50) was determined by using seven concentrations of the fungicides supplemented to the agar medium. The mycelial colony diameter was measured with a digital caliper. Experimental design was completely randomized with four replicates. Data on the percent mycelial growth inhibition were analyzed by logarithmic regression and the IC50 was calculated. The fungicide iprodione was the most potent, with IC50 < 0.01 mg/L, followed by fludioxonil, IC50 0.31 mg/L, and thiram, 1.37 mg/L. Carbendazim, metalaxyl and captan were classified as non-fungitoxic, showing IC50 > 50 mg/L for all isolates. Although iprodione is the most potent fungicide, it is not used for corn seed treatment. The IC50s obtained in this study can be used as baseline for future monitoring studies of Etsensitivity to fungicides.

Morfologia de conídios e patogenicidade de isolados de Exserohilum turcicum da Argentina e do Brasil em milho

A cultura do milho é uma das principais commodities da Argentina e do Brasil. Seu rendimento é reduzido por agentes nocivos, sendo um deles o fungo Exserohilum turcicum(Et)agente causal da helmintosporiose do milho.O presente trabalho teve como objetivo comparar as características morfológicas dos conídios e a patogenicidade de dez isolados de Etobtidos da Argentina e do Brasil. Cinco isolados monospóricos de cada país foram cultivados em meio lactose caseina hidrolizada ágar (LCHA) durante 15 dias a 25+2ºC e na ausência de luz. Prepararam-se lâminas microscópicas para a mensuração de 200 conidios de cada isolado. Na média os conídios mediram 10-25 x 30-135 μm, apresentando 2-8 septos. Detectaram-se diferenças estatísticas (p= 0,05) entre os dez isolados de Etpara todas as variáveis medidas (comprimento, largura e número de septos). Apesar da variação, as características mensuradas coincidiram com as registradas na literatura. Na comprovação da patogenicidade, plantas do híbrido de milho Pioneer P1630H, de conhecida suscetibilidade a Et, foram inoculadas com a deposição de 0,5 mL de uma suspensão de conídios de Etna concentração de 5x104 conídios/mL, no cartucho, quando atingiram a quarta folha expandida.Os dez isolados produziram, após os 15 dias da inoculação, uma média de 2,5 lesões/folha; de 39,7 x 3,4 mm de comprimento e largura respetivamente; e 4% de severidade estimada. Não se observou diferenças significativas na patogenicidade dos dez isolados estudados para nenhum dos critérios patométricos. Houve diferenças morfológicas entre os isolados da Argentina e do Brasil, porém não quanto à patogenicidade. Confirma-se que os isolados utilizados neste trabalho pertencem à espécie Et.

Efeito do tratamento de sementes e da profundidade de semeadura no desenvolvimento de plantas de aveia-branca (Avena sativa L.) e a microflora da rizosfera e do rizoplano

O estado do Paraná é um dos maiores produtores nacionais de grãos de aveia-branca (Avena sativa L.), com expressivo aumento na área cultivada a cada ano. O presente estudo foi realizado no município de Londrina, PR, onde foram desenvolvidos ensaios de laboratório e campo. O objetivo foi avaliar o efeito do tratamento de sementes e a profundidade de semeadura, na emergência das plântulas, no desenvolvimento das plantas, na população de microrganismos da rizosfera e rizoplano da área de desenvolvimento das plantas e na produção de grãos de aveia. As sementes de aveia-branca, cultivar OR-11, foram semeadas nas profundidades de 3cm, 5cm e 8cm. Foram utilizados os seguintes fungicidas nas doses (g.i.a./100kg de sementes), carboxim+thiram (93,7g+93,7g), thiram (210g) e triadimenol (50g) e o produto biológico kodiak C (Bacillus subtilis) (60g). Os tratamentos com os fungicidas e o produto biológico, controlaram os fungos presentes nas sementes, como: Fusarium avenae, Colletotrichum graminicola e Helminthosporium avenae e melhoram o desenvolvimento das plantas e a microbiota do solo, sendo esse variável com a profundidade de semeadura e o tratamento.

Qualidade sanitária e germinação de sementes de pinhão-manso

O pinhão-manso é uma espécie arbustiva que está se destacando pelo interesse para produção de biocombustível, porém, os estudos sobre controle de qualidade das sementes estão se iniciando. Neste trabalho objetivou-se estudar o efeito da temperatura e do tempo de contagem na germinação de sementes de pinhão-manso, conduzido em papel toalha bem como avaliar a qualidade sanitária das sementes, desinfestadas ou não com hipoclorito de sódio, a 2%. O estudo foi conduzido, com sementes de pinhão-manso extraídas de frutos maduros, coletados na planta. O teste de germinação foi conduzido nas temperaturas de 25 ºC e alternadas de 20-30 ºC, com contagens aos 6, 9 e 12 dias. O teste de sanidade foi conduzido a 20 ºC com fotoperíodo de 12 h por 7 dias. Foi utilizado o delineamento experimental inteiramente casualizado com quatro repetições e empregado o teste F na análise de variância dos dados de germinação e do índice de velocidade de germinação. As médias foram comparadas pelo teste de Tukey a 5% de probabilidade. O potencial máximo de germinação das sementes de pinhão-manso foi obtido na temperatura de 25 ºC, com contagens aos seis, nove e 12 dias, entretanto não apresentou diferença significativa com as temperaturas de 20-30 ºC, nas contagens aos 9 e 12 dias. As sementes de pinhão-manso analisadas apresentaram alta frequência de espécies fúngicas, independente da desinfestação superficial. A incidência de fungos em ordem decrescente foi dos gêneros: Alternaria, Macrophomina, Cladosporium, Colletotrichum, Fusarium, Pestalotiopsis, Phoma, Helminthosporium, Epicocum e Nigrospora a maioria destes fungos apresenta potencial patogênico.

Biotransformation of aromatic hydrocarbons and organic sulphides by fungi

Toluene is converted to benzyl alcohol by the fungi Mortierella isabellina and Helminthosporium species; in the latter case, the product is further metabolized. Toluene-a -d 1 , toluene-a,a-d2, and toluene-a,a,a-d 3 have been used with Mortierellaisabellina in a series of experiments to determine both primary and secondary deuterium kinetic isotope effects for the enzymic benzylic hydroxylation reaction. The values obtained, intermolecular primary kH/kD = intramolecular p rim a r y kH r kD = 1. 0 2 + O. 0 5, and sec 0 n dar y k H I kD = 1. 37 .:!. 0.05, suggest a mechanism for the reaction involving benzylic proton removal from a radical intermediate in a non-symmetrical transition state. 2H NMR (30.7 MHz) studies using ethylbenzene-l,1-d 2 , 3 -fluoroethylbenzene-l,1-d 2 , 4 -fluoroethylbenzene-l,1-d 2 , and toluene-dB as substrates with Mortierella isabellina suggest, based on the observable differences in rates of conversion between the substrates, that the hydroxylation of hydrocarbons at the benzylic position proceeds via a one electron abstraction from the aromatic ring, giving a radical cation. A series of 1,3-oxathiolanes (eight) were incubated with Mortierella isabellina , Helminthosporium , Rhizopus arrhizus , and Aspergillus niger . Sulphoxides were obtained from Mortierella isabellina and Rhizopus arrhizus using the substrates 2-phenyl-, 2-methyl-2-phenyl-, and 2-phenyl-2-tert. butyl-l,3-oxathiolane. The relative stereochemistry of 2-methyl-2-phenyl-l,3-oxathiolan-l-oxide was assigned based on lH decoupling, n.O.e, 1 and H NMR experiments. The lH NMR (200 MHz) of the methylene protons of 2-methyl-2-phenyl-l,3-oxathiolan-l-oxide was used as a diagnostic standard in assigning the relative stereochemistry of 2-phenyl-l,3-oxathiolan-l-oxide and 2-phenyl-2-tert. butyl-l,3-oxathiolan-l-oxide. The sulphoxides obtained were consistent with an oxidation occurring from the opposite side of the molecule to the phenyl substituent.

Mycoflora and fumonisin contamination in Brazilian sorghum from sowing to harvest

BACKGROUND: The aim of this study was to characterise the mycoflora and the presence of fumonisin in sorghum grains, correlating the results with the environment and abiotic factors. RESULTS: Fifty samples (five collections of ten samples each) of sorghum were analysed. All samples were found to be contaminated with fungi, with higher frequencies of Cladosporium spp. (61.8%) and Helminthosporium spp. (33.4%). Fusarium verticillioides was isolated from 15.1% of the samples, with 38% of them being contaminated with fumonisin B(1) (FB(1)) at levels ranging from 50 to 368.78 ng g(-1). Regarding abiotic factors, temperature, water activity and rainfall showed a positive correlation with the frequency of F. verticillioides and FB(1) production. There was a significant positive correlation between relative air humidity and FB(1) production. The results obtained from sexual crosses between standard F mating tester strains and the isolated strains confirmed that the strains isolated were F. verticillioides. CONCLUSION: It can be concluded that the decrease in F. verticillioides and fumonisin contamination occurred owing to atypical climatic factors during the period of sorghum cultivation, when there was any occurrence of rain and the level of water activity of grains did not reach 0.58. (C) 2010 Society of Chemical Industry

Fungos anemófilos em Porto Alegre, RS.

O conhecimento dos fungos anemófilos em determinada cidade ou região é importante para o diagnóstico etiológico e o tratamento específico das manifestações alérgicas respiratórias. Várias técnicas quantitativas e qualitativas são preconizadas para coleta e identificação desses fungos na dependência do local estudado. Nesta pesquisa, sobre esporos de fungos do ar, foi utilizado o equipamento Rotorod Sampler®, que retira a amostra do ar através de um bastão de plástico preso a um motor elétrico que o faz girar rapidamente, sendo as partículas suspensas no ar recolhidas pelo bastão. As amostras foram coletadas uma vez por semana, durante 24 horas, correspondendo a um ciclo de coleta. Foram realizadas 52 coletas entre abril de 2000 e março de 2001. Os resultados mostraram prevalência de ascosporos (50,49%), Cladosporium (17,86%), Aspergillus/Penicillium (15,03%), basidiosporos (3,84%), rusts (3,82%), Helminthosporium (2,49%), Botrytis (1,22%), Alternaria (1,19%), smuts (0,90%), Curvularia (0,87%), Nigrospora (0,61%) e Fusarium (0,08%). Não foi possível identificar 1,59% dos esporos de fungos coletados no período. O maior número de esporos foi observado nos meses de verão e o menor, durante o outono. Utilizando provas in vivo e in vitro, avaliou-se a hipersensibilidade a fungos entre 39 pacientes atópicos sofrendo de rinite e ou asma brônquica. Os testes cutâneos identificaram sensibilização em 17,94% dos pacientes, enquanto as provas sorológicas caracterizaram presença de IgE específica em 12,82% dos casos avaliados. A detecção de significativo número de esporos de fungos no ar de Porto Alegre, com muitas espécies comprovadamente alergênicas, e os índices de sensibilização observados em indivíduos atópicos confirmam a importância do estudo dos fungos anemófilos nessa cidade, com vistas a aprimorar o diagnóstico e o manejo de pacientes com manifestações alérgicas respiratórias.

Estudo fitossanitário, multiplicação e taxonomia de nematoides encontrados em sementes de gramíneas forrageiras no Brasil

Pathogens in seeds imply quarantine constraints for exportation. This research aimed to quantify nematodes and fungus populations in seed samples of forage grasses from the main Brazilian producing states, and to multiply the nematodes in vitro, as well to study the taxonomy of the nematodes detected. Seed samples of 237 lots of different forage grasses from São Paulo, Minas Gerais, Mato Grosso do Sul, Mato Grosso, Bahia, and Goias States were collected and shipped for analyses in the Nematology and Plant Pathology Laboratories at FCAV[long dash]UNESP [long dash] Jaboticabal( SP) by Comercio e Industria Matsuda Imp., Exp. Ltd. Nematodes were extracted from 10 g of seeds. To detect the fungus, the Blotter-test was applied. The identifications were done by using a photonic microscope and a stereomicroscope. For the study of in vitro multiplication of the nematodes, the following parthenogenetic species were selected: Aphelenchoides sexlineatus, Aphelenchus sp. and Ditylenchus montanus. Cultures of the fungi Fusarium sp. and Didymella brioniae were used as substrate to multiply the nematodes in Petri dishes. Each plate was inoculated with 10 mature females, then incubated in B.O.D. at 25 [plus or minus]1 [degree]C, in the dark. Thirty days after inoculation, the nematodes were extracted. The populations obtained in the suspensions were estimated in the microscope using Peters counting chamber, and the reproduction factor estimated. For the taxonomic study of the nematodes, morphological characters of specimens were recorded under the light and scanning electron microscopes. The results indicated a large distribution of nematodes and fungus in seeds of forage grasses in Brazil. The nematodes identified in the present study were: Aphelenchoides besseyi, A. bicaudatus, A. fragariae, A. sexlineatus, Ditylenchus myceliophagus, D. dipsaci, D. montanus, and Aphelenchus sp. In addition, species of the fungi Fusarium, Helminthosporium and Phoma were recovered.