Studies on the Back Water Oyster, grassostrea madra— sensis (Preston) of Cochin Harbour

A detailed study of the hydrography of the Cochin Backwaters, the habitat off crassostrea madrasensis has been carried out. Data pertaining to air temperature, water temperature, salinity, dissolved oxygen, turbidity and rainfall have been collected and presented. The temperature fluctuation was in the range of 5°C only and that of salinity between 1.1%o and 32.9%o. Fairly steady salinity has been recorded during the pre-monsoon period (February to May) and drastic declension during the monsoon period (June-September).Dissolved oxygen varied between 2.5 ml/l and 6.5 ml/l. Turbidity was highest in June (27.9 p.p.m.) and minimum (10.2 p.p.m.) in February. A detailed study on marine biofouling in the Cochin Backwaters has been made with special reference to primary film, settlement and growth of the fouling organisms such as hydroids, bryozoans, tube-dwelling polychaetes, barnacles and modiolus

Studies on the teredinids of cochin harbour

Teredinids (shipworms), a group of wood boring bivalves occurring in the Cochin Harbour region have been taken up for the eco-physiological studies. On the ecological part, the occurrence, abunance and seasonal intensity of the teredinids in relation to hydrographic conditions have been studied. On the physiological part, salinity tolerance and oxygen consumption of the most commonly occurring shipworms, Nausitcra hedlgyi and Teredo furcifera have been investigated. The hydrographic factors studied are temperature, salinity, dissolved oxygen, phosphate, nitrite, silicate and pH. The variation in temperature is found to be comparatively narrow. But seasonal variation in salinity, dissolved oxygen, phosphate, nitrite and silicate has been observed, with the highest values during the monsoon period. In the case of pH, the minimum value has been obtained during the low saline period and the maximum value, during the high saline period. Of the various hydrographic factors studied, salinity has been found to be the most important fluctuating environmental parameter influencing the life of organisms in the habitat.

Studies on siltation in cochin harbour dynamics of suspensate

The present study is an attempt to elucidate the sedimentation regime of the harbour and its environment. These investigations include detailed studies on the hydrography' of the harbour region of the estuary, estuarine circulation, spatial and temporal variations of the amount and texture of bottom sediments. A note on the dredging is also given in the Annexure .The thesis is presented in six chapters

Strait dynamics of tropical tidal inlets

The dynamics and associated stability analysis of tidal inlets situated on the southwest coast of India, namely Andhakaranazhi (90 45 J OO JJN and 760 17 J 29 JJ E) and the other at Cochin harbour inlet (90 58 1 04 J1N and 760 14 1 50 1J E) have beenconducted. A detailed study on the inlet regime of Cochin barmouth (permanent in nature) was attempted so as to elucidate information on: (a) channel characteristics (b) tidal hydraulics and (c) stability of the inlet. In this connection, a naturally occurring seasonal sandbar formation at Andhakaranazhi, near Sherthallay, about 20 km south of Cochin inlet, was also chosen as a site ofstudy brought out conclusively the dynamical study. The aspects of ( 1) tidal influx/out flux (2) channel morphology (3) sedimentation regime and (4) stability and factors related to stability of these locations. The above aspects are supported by suitable mathematical formulations to describe the associated coastal processes, wherever applicable

Studies on sphaeroma terebrans bate of the port of Cochi

Sphaeroma terebrans Bate, one of the most destructive wood-boring isopod crustacean occurring in the Cochin harbour region was taken up for investigations on its habitat, breeding, attack on timber, salinity tolerance and respiration. The respiration of the animal under different stresses was noted using an instrument fabricated in the laboratory. Of the various hydrographic conditions of the Cochin harbour region studied, salinity is found to be the most fluctuating factor and the variations are largely influenced by the seasonal rain fall from one side and the tidal currents on the other.In spite of the great fluctuations in salinity, Sphaeroma terebrans occurs throughout the year in the Cochin harbour region, though their number varies in different months. Exposure tests show that Sphaeroma terebrans can remain for about 20 to 24 hours outside water in a damp atmosphere.

Studies on Dredging Impact Assessment(DIA) at Cochin, A Tropical Estuarine Harbour

Department of Physical Oceanography, School of Marine Sciences,Cochin University of Science and Technology

Simulation of wave action on a moored container carrier inside Sines’ Harbour

The integrated numerical tool SWAMS (Simulation of Wave Action on Moored Ships) is used to simulate the behavior of a moored container carrier inside Sines’ Harbour. Wave, wind, currents, floating ship and moorings interaction is discussed. Several case scenarios are compared differing in the layout of the harbour and wind and wave conditions. The several harbour layouts correspond to proposed alternatives for the future expansion of Sines’ terminal XXI that include the extension of the East breakwater and of the quay. Additionally, the influence of wind on the behavior of the ship moored and the introduction of pre tensioning the mooring lines was analyzed. Hydrodynamic forces acting on the ship are determined using a modified version of the WAMIT model. This modified model utilizes the Haskind relations and the non-linear wave field inside the harbour obtained with finite element numerical model, BOUSS-WMH (Boussinesq Wave Model for Harbors) to get the wave forces on the ship. The time series of the moored ship motions and forces on moorings are obtained using BAS solver. © 2015 Taylor & Francis Group, London.

Angiostrongylus cantonensis (Nematode: Metastrongyloidea) in molluscs from harbour areas in Brazil

Angiostrongylus cantonensis is the most common aetiological agent of human eosinophilic meningoencephalitis. Following a report indicating the presence of this parasite in Brazil in 2007, the present study was undertaken to investigate the presence of A. cantonensis in the surrounding Brazilian port areas. In total, 30 ports were investigated and the following molluscs were identified: Achatina fulica, Belocaulus sp., Bradybaena similaris sp., Cyclodontina sp., Helix sp., Leptinaria sp., Melampus sp., Melanoides tuberculata, Phyllocaulis sp., Pomacea sp., Pseudoxychona sp., Rhinus sp., Sarasinula marginata, Streptaxis sp., Subulina octona, Succinea sp., Tomigerus sp., Wayampia sp. and specimens belonging to Limacidae and Orthalicinae. Digestion and sedimentation processes were performed and the sediments were examined. DNA was extracted from the obtained larvae and the internal transcribed spacer region 2 was analysed by polymerase chain reaction-restriction fragment length polymorphism after digestion with the endonuclease ClaI. Of the 30 ports investigated in this study, 11 contained molluscs infected with A. cantonensis larvae. The set of infected species consisted of S. octona, S. marginata, A. fulica and B. similaris. A total of 36.6% of the investigated ports were positive for A. cantonensis, indicating a wide distribution of this worm. It remains uncertain when and how A. cantonensis was introduced into South America.

Arbuscular mycorrhizal fungi (Glomeromycota) harbour ancient fungal tubulin genes that resemble those of the chytrids (Chytridiomycota).

The genes encoding alpha- and beta-tubulins have been widely sampled in most major fungal phyla and they are useful tools for fungal phylogeny. Here, we report the first isolation of alpha-tubulin sequences from arbuscular mycorrhizal fungi (AMF). In parallel, AMF beta-tubulins were sampled and analysed to identify the presence of paralogs of this gene. The AMF alpha-tubulin amino acid phylogeny was congruent with the results previously reported for AMF beta-tubulins and showed that AMF tubulins group together at a basal position in the fungal clade and showed high sequence similarities with members of the Chytridiomycota. This is in contrast with phylogenies for other regions of the AMF genome. The amount and nature of substitutions are consistent with an ancient divergence of both orthologs and paralogs of AMF tubulins. At the amino acid level, however, AMF tubulins have hardly evolved from those of the chytrids. This is remarkable given that these two groups are ancient and the monophyletic Glomeromycota probably diverged from basal fungal ancestors at least 500 million years ago. The specific primers we designed for the AMF tubulins, together with the high molecular variation we found among the AMF species we analysed, make AMF tubulin sequences potentially useful for AMF identification purposes.