Comparison of the reproductive ecology of two sympatric blacktip sharks (Carcharhinus limbatus and Carcharhinus tilstoni) off north-eastern Australia with species identification inferred from vertebral counts

Precaudal vertebral counts were used to distinguish between 237 morphologically similar Carcharhinus limbatus and Carcharhinus tilstoni and were congruent with differences in reproductive ecology between the species. In addition to differing lengths at maturity and adult body size, the two species had asynchronous parturition, were born at different sizes and the relative frequencies of neonates differed in two coastal nursery areas. Despite evidence that hybridization can occur, these differences suggest the species are largely reproductively isolated.

Gillnet selectivity for juvenile blacktip sharks (Carcharhinus limbatus)

Gillnet mesh selectivity parameters were estimated for juvenile blacktip sharks (Carcharhinus limbatus) by using length data from an experimental fishery-independent gillnet survey in the northeastern Gulf of Mexico. Length data for 1720 blacktip sharks were collected over 17 years (1994–2010) with seven mesh sizes ranging from 7.6 to 20.3 cm. Four selectivity models, a normal model assuming fixed spread, a normal model assuming that spread is proportional to mesh size, a lognormal model, and a gamma model were fitted to the data by using the SELECT (share each length’s catch total) method. Each model was run twice under separate assumptions of 1) equal fishing intensity; and 2) fishing intensity proportional to mesh size. The normal, fixed-spread selectivity curve where fishing intensity is assumed to be proportional to mesh size provided the best fit to the data according to model deviance estimates and was chosen as the best model. Results indicate that juvenile blacktip sharks are susceptible as bycatch in some commercial gillnet fisheries.

Inclusion of South American samples reveals new population structuring of the blacktip shark (Carcharhinus limbatus) in the western Atlantic

ABSTRACT: Carcharhinus limbatus has a cosmopolitan distribution and marked genetic structuring, mainly because of its philopatric behavior. However, analysis of this structuring has not previously included South American populations. In the present study, we analyzed a sample of adult individuals collected on the northern coast of Brazil and compared the sequences of the mitochondrial control region with those of populations already genotyped. Relatively high haplotype diversity (12 haplotypes, genetic diversity of 0.796) was observed, similar to that in other populations but with a much larger number of private alleles. In contrast to populations studied previously, which were represented by neonates, the pronounced allelic variability found in the South American individuals may have resulted from migrations from other populations in the region that have yet to be genotyped. This population was also genetically distinct from the other Atlantic populations (Fst > 0.8), probably because of female philopatry, and apparently separated from the northwestern Atlantic group 1.39 million years ago. These findings indicate that the C. limbatus population from northern Brazil is genetically distinct from all other populations and should be considered as a different management unit for the protection of stocks.

Towards better management of Australia’s shark fishery: genetic analyses reveal unexpected ratios of cryptic blacktip species Carcharhinus tilstoni and C. limbatus

The common blacktip shark (Carcharhinus limbatus) and the Australian blacktip shark (C. tilstoni) are morphologically similar species that co-occur in subtropical and tropical Australia. In striking contrast to what has been previously reported, we demonstrate that the common blacktip shark is not rare in northern Australia but occurs in approximately equal frequencies with the Australian blacktip shark. Management of shark resources in northern Australia needs to take account of this new information. Species identification was performed using nucleotide sequences of the control, NADH dehydrogenase subunit 4 (ND4) and cytochrome oxidase I (COI) regions in the mitochondrial genome. The proportion of overall genetic variation (FST) between the two species was small (0.042, P < 0.01) based on allele frequencies at five microsatellite loci. We confirm that a third blacktip species (C. amblyrhynchoides, graceful shark) is closely related to C. tilstoni and C. limbatus and can be distinguished from them on the basis of mtDNA sequences from two gene regions. The Australian blacktip shark (C. tilstoni) was not encountered among 20 samples from central Indonesia that were later confirmed to be common blacktip and graceful sharks. Fisheries regulators urgently need new information on life history, population structure and morphological characters for species identification of blacktip shark species in Australia.

Life history and population dynamics of the finetooth shark (Carcharhinus isodon) in the northeastern Gulf of Mexico

The life history and population dynamics of the finetooth shark (Carcharhinus isodon) in the north-eastern Gulf of Mexico were studied by determining age, growth, size-at-maturity, natural mortality, productivity, and elasticity of vital rates of the population. The von Bertalanffy growth model was estimated as Lt=1559 mm TL (1–e–0.24 (t+2.07)) for females and Lt = 1337 mm TL (1–e–0.41 (t+1.39)) for males. For comparison, the Fabens growth equation was also fitted separately to observed size-at-age data, and the fits to the data were found to be similar. The oldest aged specimens were 8.0 and 8.1 yr, and theoretical longevity estimates were 14.4 and 8.5 yr for females and males, respectively. Median length at maturity was 1187 and 1230 mm TL, equivalent to 3.9 and 4.3 yr for males and females, respectively. Two scenarios, based on the results of the two equations used to describe growth, were considered for population modeling and the results were similar. Annual rates of survivorship estimated through five methods ranged from 0.850/yr to 0.607/yr for scenario 1 and from 0.840/yr to 0.590/yr for scenario 2. Productivities were 0.041/yr for scenario 1 and 0.038/yr for scenario 2 when the population level that produces maximum sustain-able yield is assumed to occur at an instantaneous total mortality rate (Z) equaling 1.5 M, and were 0.071/yr and 0.067/yr, when Z=2 M for scenario 1 and 2, respectively. Mean generation time was 6.96 yr and 6.34 yr for scenarios 1 and 2, respectively. Elasticities calculated through simulation of Leslie matrices averaged 12.6% (12.1% for scenario 2) for fertility, 47.7% (46.2% for scenario 2) for juvenile survival, and 39.7% (41.6% for scenario 2) for adult survival. In all, the finetooth shark exhibits life-history and population characteristics intermediate to those of sharks in the small coastal complex and those from some large coastal species, such as the blacktip shark (Carcharhinus limbatus).

Analysis of permanent magnets as elasmobranch bycatch reduction devices in hook-and-line and longline trials

Previous studies indicate that elasmobranch fishes (sharks, skates and rays) detect the Earth’s geomagnetic field by indirect magnetoreception through electromagnetic induction, using their ampullae of Lorenzini. Applying this concept, we evaluated the capture of elasmobranchs in the presence of permanent magnets in hook-and-line and inshore longline fishing experiments. Hooks with neodymium-iron-boron magnets significantly reduced the capture of elasmobranchs overall in comparison with control and procedural control hooks in the hook-and-line experiment. Catches of Atlantic sharpnose shark (Rhizoprionodon terraenovae) and smooth dogfish (Mustelus canis) were signif icantly reduced with magnetic hook-and-line treatments, whereas catches of spiny dogfish (Squalus acanthias) and clearnose skate (Raja eglanteria) were not. Longline hooks with barium-ferrite magnets significantly reduced total elasmobranch capture when compared with control hooks. In the longline study, capture of blacktip sharks (Carcharhinus limbatus) and southern stingrays (Dasyatis americana) was reduced on magnetic hooks, whereas capture of sandbar shark (Carcharhinus plumbeus) was not affected. Teleosts, such as red drum (Sciaenops ocellatus), Atlantic croaker (Micropogonias undulatus), oyster toadfish (Opsanus tau), black sea bass (Centropristis striata), and the bluefish (Pomatomas saltatrix), showed no hook preference in either hook-and-line or longline studies. These results indicate that permanent magnets, although eliciting species-specific capture trends, warrant further investigation in commercial longline and recreational fisheries, where bycatch mortality is a leading contributor to declines in elasmobranch populations.

An Index of Abundance for Coastal Species of Juvenile Sharks from the Northeast Gulf of Mexico

A fishery-independent assessment of juvenile coastal shark populations in U.S. waters of the northeast Gulf of Mexico was conducted using two methods: gillnets and longlines. Surveys were conducted monthly during April–October in two fixed sampling areas from 1996 to 1998. The Atlantic sharpnose shark, Rhizoprionodon terraenovae, and the blacktip shark, Carcharhinus limbatus, were the most common species captured with either longlines or gillnets. An additional 14 shark species were captured, and juvenile indices of abundance were developed for 8 species with gillnets and 6 species of sharks with longlines. Trends in catch-per-unit-effort were found to vary depending on species. Length-frequency information revealed that the majority of sharks captured were juveniles. Given the direct relationship between stock and recruitment for sharks, continued monitoring of juvenile abundance will aid in determining the strength of the parental stock size and for predicting future population strength.

Multiscale analysis of factors that affect the distribution of sharks throughout the northern Gulf of Mexico

Identification of the spatial scale at which marine communities are organized is critical to proper management, yet this is particularly difficult to determine for highly migratory species like sharks. We used shark catch data collected during 2006–09 from fishery-independent bottom-longline surveys, as well as biotic and abiotic explanatory data to identify the factors that affect the distribution of coastal sharks at 2 spatial scales in the northern Gulf of Mexico. Centered principal component analyses (PCAs) were used to visualize the patterns that characterize shark distributions at small (Alabama and Mississippi coast) and large (northern Gulf of Mexico) spatial scales. Environmental data on temperature, salinity, dissolved oxygen (DO), depth, fish and crustacean biomass, and chlorophyll-a (chl-a) concentration were analyzed with normed PCAs at both spatial scales. The relationships between values of shark catch per unit of effort (CPUE) and environmental factors were then analyzed at each scale with co-inertia analysis (COIA). Results from COIA indicated that the degree of agreement between the structure of the environmental and shark data sets was relatively higher at the small spatial scale than at the large one. CPUE of Blacktip Shark (Carcharhinus limbatus) was related positively with crustacean biomass at both spatial scales. Similarly, CPUE of Atlantic Sharpnose Shark (Rhizoprionodon terraenovae) was related positively with chl-a concentration and negatively with DO at both spatial scales. Conversely, distribution of Blacknose Shark (C. acronotus) displayed a contrasting relationship with depth at the 2 scales considered. Our results indicate that the factors influencing the distribution of sharks in the northern Gulf of Mexico are species specific but generally transcend the spatial boundaries used in our analyses.

Studies on the utilization of selected species of Sharks

This thesis Entitled Studies on the Utilization of selected Species of sharks. The present study is the result of work carried out for 5 years, during the period from April, 1983 to March 1988. The materials were collected from the catches of the Government of India vessels, operated along the south west coast of India and landed in the Integrated Fisheries Project, Cochin—16. The sharks were caught by different types of gears such as bottom trawls, pelagic trawls, long line etc. A number of species of sharks were landed during this period and three species were selected for the present study namely Scoliodon palasorra (bleeker 1853, grey Shark), Carcharhinus limbatus (valenciennes 1839,black tip shark ) and centrophorus granulosus (bloch and schneider 1801 ,spiny shark). During this study period the quantity of shark utilized was 12,55,942 kg out of which 9.71% used for the production of Dressed shark; 36.21% for the production of Fillets; 49.09% converted into Dried shark and 4.99% was domesticallyy marketed as whole form. Besides this 526 kg of dried shark fin and 289.25 kg of shark fin rays were produced.The effect of Smoking of shark fillets and minced meat at different temperature were also studied during this period. Canning of cooked shark meat, smoked fillets and fish balls were carried out in media like brine, vegetable oil, tomato sauce etc. The quality of smoked fillets in vegetable oil was found superior to other canned products from shark meat.During this study an attempt was also made to evaluate the commercial processing of shark resources and found feasible.

Fishery and biology of deep-sea chondrichthyans off the southwest coast of india

Elasmobranchs comprising sharks, skates and rays have traditionally formed an important fishery along the Indian coast. Since 2000, Indian shark fishermen are shifting their fishing operations to deeper/oceanic waters by conducting multi-day fishing trips, which has resulted in considerable changes in the species composition of the landings vis- a-vis those reported during the 1980’s and 1990’s. A case study at Cochin Fisheries Harbour (CFH), southwest coast of India during 2008-09 indicated that besides the existing gillnet–cum- hooks & line and longline fishery for sharks, a targeted fishery at depths >300-1000 m for gulper sharks (Centrophorus spp.) has emerged. In 2008, the chondrichthyan landings (excluding batoids) were mainly constituted by offshore and deep-sea species such as Alopias superciliosus (24.2%), Carcharhinus limbatus (21.1%), Echinorhinus brucus (8.2%), Galeocerdo cuvier (5.4%), Centrophorus spp. (7.3%) and Neoharriotta pinnata (4.2%) while the contribution by the coastal species such as Sphyrna lewini (14.8%), Carcharhinus sorrah (1.4%) and other Carcharhinus spp. has reduced. Several deep-sea sharks previously not recorded in the landings at Cochin were also observed during 2008-09. It includes Hexanchus griseus, Deania profundorum, Zameus squamulosus and Pygmy false catshark (undescribed) which have been reported for the first time from Indian waters. Life history characteristics of the major fished species are discussed in relation to the fishery and its possible impacts on the resource

Spatial and ontogenetic variation in growth of nursery-bound juvenile lemon sharks, Negaprion brevirostris: a comparison of two age-assigning techniques

We compared growth rates of the lemon shark, Negaprion brevirostris, from Bimini, Bahamas and the Marquesas Keys (MK), Florida using data obtained in a multi-year annual census. We marked new neonate and juvenile sharks with unique electronic identity tags in Bimini and in the MK we tagged neonate and juvenile sharks. Sharks were tagged with tiny, subcutaneous transponders, a type of tagging thought to cause little, if any disruption to normal growth patterns when compared to conventional external tagging. Within the first 2 years of this project, no age data were recorded for sharks caught for the first time in Bimini. Therefore, we applied and tested two methods of age analysis: ( 1) a modified 'minimum convex polygon' method and ( 2) a new age-assigning method, the 'cut-off technique'. The cut-off technique proved to be the more suitable one, enabling us to identify the age of 134 of the 642 previously unknown aged sharks. This maximised the usable growth data included in our analysis. Annual absolute growth rates of juvenile, nursery-bound lemon sharks were almost constant for the two Bimini nurseries and can be best described by a simple linear model ( growth data was only available for age-0 sharks in the MK). Annual absolute growth for age-0 sharks was much greater in the MK than in either the North Sound (NS) and Shark Land (SL) at Bimini. Growth of SL sharks was significantly faster during the first 2 years of life than of the sharks in the NS population. However, in MK, only growth in the first year was considered to be reliably estimated due to low recapture rates. Analyses indicated no significant differences in growth rates between males and females for any area.

Mother–offspring isotope fractionation in two species of placentatrophic sharks

Stable-isotope values of a scalloped hammerhead Sphyrna lewini and blacktip shark Carcharhinus limbatus and their respective embryos were analysed. Embryos of both species were enriched in δ15N compared to their mothers (0·82 and 0·88‰, respectively), but fractionation of δ13C varied. Embryonic S. lewini were enriched (1·00‰) in δ13C while C. limbatus were depleted (0·27‰) relative to their mothers.

A mitochondrial species identification assay for Australian blacktip sharks (Carcharhinus tilstoni, C. limbatus and C. amblyrhynchoides) using real-time PCR and high-resolution melt analysis

Tropical Australian shark fisheries target two morphologically indistinguishable blacktip sharks, the Australian blacktip (Carcharhinus tilstoni) and the common blacktip (C. limbatus). Their relative contributions to northern and eastern Australian coastal fisheries are unclear because of species identification difficulties. The two species differ in their number of precaudal vertebrae, which is difficult and time consuming to obtain in the field. But, the two species can be distinguished genetically with diagnostic mutations in their mitochondrial DNA ND4 gene. A third closely related sister species, the graceful shark C. amblyrhynchoides, can also be distinguished by species-specific mutations in this gene. DNA sequencing is an effective diagnostic tool, but is relatively expensive and time consuming. In contrast, real-time high-resolution melt (HRM) PCR assays are rapid and relatively inexpensive. These assays amplify regions of DNA with species-specific genetic mutations that result in PCR products with unique melt profiles. A real-time HRM PCR species-diagnostic assay (RT-HRM-PCR) has been developed based on the mtDNA ND4 gene for rapid typing of C. tilstoni, C. limbatus and C. amblyrhynchoides. The assay was developed using ND4 sequences from 66 C. tilstoni, 33. C. limbatus and five C. amblyrhynchoides collected from Indonesia and Australian states and territories; Western Australia, the Northern Territory, Queensland and New South Wales. The assay was shown to be 100% accurate on 160 unknown blacktip shark tissue samples by full mtDNA ND4 sequencing.