Subtropical Brazilian mangroves as a refuge of crab (Decapoda: Brachyura) diversity

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

The diversity of ammonium-oxidizing archaea and anammox bacteria in brazilian mangroves sediments.

2009

Population and reproductive biology of the crab Uca burgersi (Crustacea : Ocypodidae) in three subtropical mangrove forests

Population and reproductive biology were studied in three populations of the crab Uca burgersi Holthuis, 1967, in the Indaia, Cavalo and Ubatumirim mangrove forests (Ubatuba, São Paulo State, Brazil). Crabs were collected during low tide (August 2001 through July 2002), by digging the sediment, with a standard capture effort (two persons for 30 min.). Carapace width was measured, and gonad developmental stage was recorded from all specimens. U. burgersi was most abundant in the Cavalo mangrove, where the largest mate was found. Juvenile crabs were found year-round at all three sites. However, the ratio of ovigerous females was very low, even null in the Cavalo mangrove. The gonad development rate indicated that U. burgersi was reproducing continuously, but more intensively during spring and summer, with recruitment occurring in winter. The synchrony between the populational and reproductive biology in the three areas showed that local features were not the limiting factors. It is suggested that this species is a habitat generalist.

Cultivo de larvas de Ucides cordatus (LINNAEU, 1763) sob diferentes intensidades luminosas

O caranguejo-uçá, Ucides cordatus, é uma espécie típica dos manguezais brasileiros e tem grande importância econômica para as populações litorâneas tradicionais. O presente trabalho investigou a influência da intensidade luminosa sobre a sobrevivência e a taxa de desenvolvimento larval de U. cordatus. Três intensidades luminosas foram avaliadas: claro - 710 lux, penumbra - 210 lux e escuro - 1 lux, em duas condições de cultivo, individual e coletivo. Houve diferenças significativas entre as taxas de sobrevivência das larvas zoea e as três intensidades luminosas avaliadas (p<0,05). As maiores taxas de ecdise para o estágio de megalopa foram obtidas no tratamento claro (42% nos cultivos coletivos e 30% nos cultivos individuais). No tratamento escuro, a metamorfose para megalopa foi de apenas 16% nos cultivos coletivos e de 7% nos cultivos individuais. Estes resultados indicam que a manutenção das larvas em baixas intensidades luminosas afeta negativamente a sobrevivência larval de U. cordatus.

Relative growth of Uca burgersi (Crustacea, Ocypodidae) from two mangroves in the southeastern Brazilian coast

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Comparative population biology of Uca rapax (Smith, 1870) (Brachyura, Ocypodidae) from two subtropical mangrove habitats on the Brazilian coast

The structure of two populations of the fiddler crab Uca rapax in two subtropical mangrove habitats near Ubatuba, State of São Paulo, Brazil were compared. The size - frequency distribution, sex ratio, and recruitment were evaluated. Sampling was performed monthly from April 2001 to March 2002 in the Itamambuca and Ubatumirim habitats. Crabs were caught manually for 15 min by two collectors during low tide. The carapace width of each crab was measured with a digital caliper, and the sex and ovigerous state were recorded. The median size of the carapace width of males was greater than that of females at both sites (P<0.05). The median size of the crabs from Itamambuca was larger than at Ubatumirim (P<0.05). Only 28 ovigerous females were obtained from both mangroves, which suggested that females might remain in their burrows during the incubation period. The highest recruitment pulse occurred in winter for both populations, probably as a consequence of high reproductive activity during summer. The sex ratio in the size classes showed an anomalous pattern, with a higher frequency of females in the intermediate size classes. This may be related to a greater energy requirement for reproduction in females, thus delaying growth. The variable environmental conditions to which Uca rapax populations are subject appear to act directly or indirectly on the population, causing variations in growth and reproductive processes in the different populations investigated here.

Physiologic sexual maturity of the fiddler crab Uca rapax (Smith, 1870) (crustacea, ocypodidae) from two mangroves in Ubatuba, Brazil

The gonad development of Uca rapax was studied to achieve the size at onset of its sexual maturity. Crabs were sampled from April/2001 to March/2002 in the Itamambuca and Ubatumirim mangroves in Ubatuba, São Paulo, Brazil. The specimens were grouped in 10 size classes. Juveniles and adult crabs frequencies were assessed for each class. The size of carapace width in which 50% of males and females were considered mature was 14.8 and 12.1 mm (Itamambuca) and 13.6 and 11.4 mm (Ubatumirim), respectively for males and females. Males matured at higher sizes than females, probably due to a major investment in their somatic growth, while females spend their energy in the reproductive process, saving energy for eggs' production.

Seasonal abundance of the shipworm Neoteredo reynei (Bivalvia, Teredinidae) in mangrove driftwood from a northern Brazilian beach

Turus são importantes decompositores de madeira, especialmente em manguezais, onde a produtividade é alta. Entretanto, pouca ênfase tem sido dada à atividade de turus em relação à exportação de nutrientes de manguezais para as áreas costeiras adjacentes. Como um passo inicial para obter tais informações, a freqüência de madeira do mangue à deriva colonizada por turus, bem como a densidade e comprimento de turus, foram estudados através da coleta de troncos encalhados durante 12 meses na praia de Ajuruteua, Estado do Pará, norte do Brasil. Uma única espécie, Neoteredo reynei (Bartsch, 1920), foi encontrada colonizando a madeira à deriva. Embora troncos grandes colonizados fossem mais comuns na praia, a densidade de turus foi maior nos troncos menores, especialmente na estação seca. Em geral, a densidade foi maior durante a estação chuvosa (janeiro a abril) e menor em julho. O comprimento médio geral de turus foi de 9,66cm e, em troncos grandes, o comprimento médio aumentou entre as estações chuvosa e seca. Entretanto, não houve nenhuma diferença em comprimento entre as categorias de tamanho dos troncos. O comprimento médio dos turus foi semelhante ao longo do maior parte do ano, mas a tendência foi de comprimentos maiores em julho. Embora a salinidade tenha variado entre 10,9 e 40 durante o ano, nenhuma relação entre salinidade e densidade ou comprimento foi encontrada. Os resultados sugerem que a atividade de turus em madeira à deriva é relativamente constante ao longo do ano. Maior umidade do ar e precipitação podem promover sobrevivência durante a estação chuvosa. Troncos maiores podem levar mais tempo para serem colonizados e portanto podem ter densidades menores do que nos troncos menores. Estes últimos são incomuns talvez porque sejam rapidamente destruídos pela atividade dos turus. Dados sobre a desintegração de troncos, entretanto, seriam necessários para corroborar esta hipótese. O tamanho maior de turus na estação seca possivelmente esteja relacionado ao crescimento após um período anterior de recrutamento. Na estação seca, turus em troncos grandes podem ser melhor protegidos da dessecação e de altas temperaturas pelas propriedades isolantes do maior volume de madeira.

Use of intertidal areas by shrimps (Decapoda) in a brazilian Amazon estuary

O presente trabalho investigou a ocupação e a correlação da abundância de camarões em relação às variáveis ambientais nos diferentes habitats (manguezal, marisma e afloramento rochoso) em um estuário amazônico. As coletas foram realizadas em agosto e novembro de 2009, na maré baixa de sizígia na praia do Areuá, situada na RESEX Mãe Grande de Curuçá, Pará, totalizando 20 poças. Em cada ambiente foram registrados os fatores físicoquímicos (pH, salinidade e temperatura) e mensuradas a área (m²) e o volume (m³) de cada poça através da técnica de batimetria. A média do pH, salinidade, temperatura, área e volume das poças-de-maré foram 8,75 (± 0,8 desvio padrão) 35,45 (± 3), 29,49 °C (± 2,32), 27,41 m² (± 41,18) e 5,19 m³ (± 8,01), respectivamente. Foi capturado um total de 4.871 indivíduos, distribuídos em três famílias e quatro espécies: Farfantepenaeus subtilis (marinha) a mais frequente (98,36%), seguida de Alpheus pontederiae (0,76%) (estuarina), Macrobrachium surinamicum (0,45%) e Macrobrachium amazonicum (0,43%) predominantemente dulcícolas. As espécies F. subtilis e A. pontederiae ocorreram nos três habitats, enquanto que M. surinamicum ocorreu no afloramento rochoso e marisma e M. amazonicum somente no marisma. O pH e a temperatura foram os descritores ambientais mais importantes que afetaram significativamente a densidade e a biomassa dos camarões.

Breeding season diet of Scarlet Ibises and Little Blue Herons in a Brazilian mangrove swamp

We studied the diet composition and overlap of Scarlet Ibises (Eudocimus ruber) and Little Blue Herons (Egretta caerulea in a mangrove swamp in southeast Brazil during the 1996-1997 breeding season, which occurs during the rainiest period. Crabs comprised 95% of all prey taken by the ibises and 80% of the prey of the herons, Nevertheless, diet overlap was small (similar to 30%) due to ibises feeding mostly on Uca spp. and Eurythium limosum crabs, which were taken from their burrows; the herons fed on the arboreal and semi-arboreal Aratus Pisonii and Metasesarma rubripes crabs. Divergent hunting strategies of ibises (tactile foragers) and herons visually-oriented predators) explains the diet segregation when preying on an ecologically diverse crab guild, but it is unclear why herons prey rarely on fiddler crabs. Scarlet Ibises bred successfully while feeding oil estuarine organisms living in low salinities in the mangroves, showing that mangroves may be adequate foraging habitats for chick-rearing ibises during periods of low salinity.

The Microbiome of Brazilian Mangrove Sediments as Revealed by Metagenomics

Here we embark in a deep metagenomic survey that revealed the taxonomic and potential metabolic pathways aspects of mangrove sediment microbiology. The extraction of DNA from sediment samples and the direct application of pyrosequencing resulted in approximately 215 Mb of data from four distinct mangrove areas (BrMgv01 to 04) in Brazil. The taxonomic approaches applied revealed the dominance of Deltaproteobacteria and Gammaproteobacteria in the samples. Paired statistical analysis showed higher proportions of specific taxonomic groups in each dataset. The metabolic reconstruction indicated the possible occurrence of processes modulated by the prevailing conditions found in mangrove sediments. In terms of carbon cycling, the sequences indicated the prevalence of genes involved in the metabolism of methane, formaldehyde, and carbon dioxide. With respect to the nitrogen cycle, evidence for sequences associated with dissimilatory reduction of nitrate, nitrogen immobilization, and denitrification was detected. Sequences related to the production of adenylsulfate, sulfite, and H2S were relevant to the sulphur cycle. These data indicate that the microbial core involved in methane, nitrogen, and sulphur metabolism consists mainly of Burkholderiaceae, Planctomycetaceae, Rhodobacteraceae, and Desulfobacteraceae. Comparison of our data to datasets from soil and sea samples resulted in the allotment of the mangrove sediments between those samples. The results of this study add valuable data about the composition of microbial communities in mangroves and also shed light on possible transformations promoted by microbial organisms in mangrove sediments.

Abundance and Genetic Diversity of nifH Gene Sequences in Anthropogenically Affected Brazilian Mangrove Sediments

Although mangroves represent ecosystems of global importance, the genetic diversity and abundance of functional genes that are key to their functioning scarcely have been explored. Here, we present a survey based on the nifH gene across transects of sediments of two mangrove systems located along the coast line of Sao Paulo state (Brazil) which differed by degree of disturbance, i.e., an oil-spill-affected and an unaffected mangrove. The diazotrophic communities were assessed by denaturing gradient gel electrophoresis (DGGE), quantitative PCR (qPCR), and clone libraries. The nifH gene abundance was similar across the two mangrove sediment systems, as evidenced by qPCR. However, the nifH-based PCR-DGGE profiles revealed clear differences between the mangroves. Moreover, shifts in the nifH gene diversities were noted along the land-sea transect within the previously oiled mangrove. The nifH gene diversity depicted the presence of nitrogen-fixing bacteria affiliated with a wide range of taxa, encompassing members of the Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Firmicutes, and also a group of anaerobic sulfate-reducing bacteria. We also detected a unique mangrove-specific cluster of sequences denoted Mgv-nifH. Our results indicate that nitrogen-fixing bacterial guilds can be partially endemic to mangroves, and these communities are modulated by oil contamination, which has important implications for conservation strategies.

Brazilian research on extremophiles in the context of astrobiology

Extremophiles are organisms adapted to grow at extreme ranges of environmental variables, such as high or low temperatures, acid or alkaline medium, high salt concentration, high pressures and so forth. Most extremophiles are micro-organisms that belong to the Archaea and Bacteria domains, and are widely spread across the world, which include the polar regions, volcanoes, deserts, deep oceanic sediments, hydrothermal vents, hypersaline lakes, acid and alkaline water bodies, and other extreme environments considered hostile to human life. Despite the tropical climate, Brazil has a wide range of ecosystems which include some permanent or seasonally extreme environments. For example, the Cerrado is a biome with very low soil pH with high Al+3 concentration, the mangroves in the Brazilian coast are anaerobic and saline, Pantanal has thousands of alkaline-saline lakes, the Caatinga arid and hot soils and the deep sea sediments in the Brazilian ocean shelf. These environments harbour extremophilic organisms that, coupled with the high natural biodiversity in Brazil, could be explored for different purposes. However, only a few projects in Brazil intended to study the extremophiles. In the frame of astrobiology, for example, these organisms could provide important models for defining the limits of life and hypothesize about life outside Earth. Brazilian microbiologists have, however, studied the extremophilic micro-organisms inhabiting non-Brazilian environments, such as the Antarctic continent. The experience and previous results obtained from the Brazilian Antarctic Program (PROANTAR) provide important results that are directly related to astrobiology. This article is a brief synopsis of the Brazilian experience in researching extremophiles, indicating the most important results related to astrobiology and some future perspectives in this area. Received 29 February 2012, accepted 25 May 2012, first published online 11 July 2012