Charles Henry Gilbert (1859-1928), Naturalist-in-Charge: the 1906 North Pacific Expedition of the Steamer Albatross

Fishery science pioneers often faced challenges in their field work that are mostly unknown to modern biologists. Some of the travails faced by ichthyologist and, later, fishery biologist Charles Henry Gilbert (1859-1928) during his service as Naturalist-in-Charge of the North Pacific cruise ofthe U.S. Bureau of Fisheries Steamer Albatross in 1906, are described here, as are accomplishments of the cruise. The vessel left San Francisco, Calif., on 3 May 1906, just after the great San Francisco earthquake, for scientific exploration of waters of the Aleutian islands, Bering Sea, Kamchatka, Sakhalin, and Japan, returning to San Francisco in December. Because the expedition occurred just after the war between Japan and Russia of 1904-05 floating derelict mines in Japanese waters were often a menace. Major storms caused havoc in the region, and the captain of the Albatross, Lieutenant Commander LeRoy Mason Garrett (1857-1906), U.S.N., was lost at sea, apparently thrown from the vessel during a sudden storm on the return leg of the cruise. Despite such obstacles, Gilbert and the Albatross successfully completed their assigned chores. They occupied 339 dredging and 48 hydrographic stations, and discovered over 180 new species of fishes and many new species of invertebrates. The expedition's extensive biological collections spawned over 30 descriptive publications, some of which remain today as standards of knowledge.

Colección de corales pétreos de Cuba. [Versión electrónica para multimedia del libro Corales Pétreos de Cuba publicado en 1980 por Nereida Martínez Estalella y Vasil Zlatarski.]

Versión electrónica para multimedia del libro Corales Pétreos de Cuba publicado en 1980 por Nereida Martínez Estalella y Vasil Zlatarski. La colección de Corales pétreos se formó en el Instituto de Oceanología entre los años 1970 y 1975. En 2005 pasa a ser custodiada por el Acuario Nacional con el resto de las colecciones biológicas. La colección está formada por 4,990 ejemplares, 2 Clases Anthozoa e Hydrozoa , 16 familias, 30 géneros, 45 especies y 23 formas. Multimedia electronic book version of Stony Corals Cuba published in 1980 by Nereida Martínez Estalella and Vasil Zlatarski. The collection of stony corals are formed at the Institute of Oceanology between 1970 and 1975. Renumbered in 2005 by the National Aquarium guarded with other biological collections. The collection consists of 4,990 samples, 2 classes Anthozoa and Hydrozoa, 16 families, 30 genera, 45 species and 23 forms.

Empregabilidade dos alunos diplomados em Análises Clínicas e Saúde Pública da ERISA entre 2006 e 2010

O presente trabalho foi realizado por um grupo de alunos do 4.º ano do Curso de Análises Clínicas e Saúde Pública (ACSP) da ERISA, no âmbito de um projecto de investigação aplicada. Este projecto visou elaborar uma correlação entre os alunos de ACSP formados na ERISA e a sua empregabilidade. Para tal, elaborou-se um inquérito com 17 questões, o qual foi enviado por correio electrónico a um total de 154 contactos, de alunos diplomados em ACSP na ERISA, entre os anos de 2006 a 2010. As respostas foram recolhidas e os dados tratados estatisticamente com o software SPSS. Pode-se concluir que a maioria dos inquiridos: possui o grau académico de pré-Bolonha e Bolonha (35,2 e 49,3%); já trabalhou na área (87,3%) e continua a trabalhar na área (84,3%); teve relativa facilidade em encontrar emprego na área com um tempo inferior a 1 mês (50,8%). Como primeiro emprego, a grande maioria (69,4%) começou exercendo funções efectuando colheitas, através do envio de candidaturas espontâneas. Relativamente à carga horária, a grande maioria (60,3%) começou a trabalhar em tempo parcial com uma situação contratual de recibos verdes. Dos inquiridos 71,4% exercem as suas funções em laboratórios de Patologia Clínica, 3,2 % em Laboratórios de Saúde Pública e 1,6% na área de ImunoHemoterapia. Este trabalho contribuiu para aferir a necessidade do mercado de trabalhadores licenciados em Análises Clínicas e Saúde Pública.

A model for analysing data portal performance: The biodiversity case

Currently, many museums, botanic gardens and herbariums keep data of biological collections and using computational tools researchers digitalize and provide access to their data using data portals. The replication of databases in portals can be accomplished through the use of protocols and data schema. However, the implementation of this solution demands a large amount of time, concerning both the transfer of fragments of data and processing data within the portal. With the growth of data digitalization in institutions, this scenario tends to be increasingly exacerbated, making it hard to maintain the records updated on the portals. As an original contribution, this research proposes analysing the data replication process to evaluate the performance of portals. The Inter-American Biodiversity Information Network (IABIN) biodiversity data portal of pollinators was used as a study case, which supports both situations: conventional data replication of records of specimen occurrences and interactions between them. With the results of this research, it is possible to simulate a situation before its implementation, thus predicting the performance of replication operations. Additionally, these results may contribute to future improvements to this process, in order to decrease the time required to make the data available in portals. © Rinton Press.

Diagnóstico da pesquisa em biodiversidade no Brasil

Biodiversity is a result of millions of years of biological evolution, and is the component of the system which supports life on our planet. Besides the intrinsic value of each species, all of them as a whole, as well as of the interactions among the species, and their interaction with the physical and chemical environment, result in ecosystem services vital for supporting life on Earth. Because of that, the science of biodiversity is largely recognized as a priority area of scientific investigation both in developed and developing countries. In Brazil, the research on biodiversity can be divided in three parts: 1) discovery and characterization of biodiversity – including marine and human-altered landscapes – systematics and taxonomy; 2) understanding the functioning of ecosystems and environmental services, including in marine and human-altered landscapes; 3) bioprospecting of the chemical diversity of the Brazilian biota.

The utility of open-access biodiversity information in representing anurans in the Brazilian Atlantic Forest and Cerrado

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Descriptions of North American Chalcididae from the collections of the U. S. Department of agriculture and of Dr. C. V. Riley, with biological notes. . Together with a list of the described North American species of the family.

United States. Dept. of Agriculture. Bureau of Entomology. Bulletin, no. 5.

Genetic bottlenecks in time and space: reconstructing invasions from contemporary and historical collections

Herbarium accession data offer a useful historical botanical perspective and have been used to track the spread of plant invasions through time and space. Nevertheless, few studies have utilised this resource for genetic analysis to reconstruct a more complete picture of historical invasion dynamics, including the occurrence of separate introduction events. In this study, we combined nuclear and chloroplast microsatellite analyses of contemporary and historical collections of Senecio madagascariensis, a globally invasive weed first introduced to Australia c. 1918 from its native South Africa. Analysis of nuclear microsatellites, together with temporal spread data and simulations of herbarium voucher sampling, revealed distinct introductions to south-eastern Australia and mid-eastern Australia. Genetic diversity of the south-eastern invasive population was lower than in the native range, but higher than in the mid-eastern invasion. In the invasive range, despite its low resolution, our chloroplast microsatellite data revealed the occurrence of new haplotypes over time, probably as the result of subsequent introduction(s) to Australia from the native range during the latter half of the 20th century. Our work demonstrates how molecular studies of contemporary and historical field collections can be combined to reconstruct a more complete picture of the invasion history of introduced taxa. Further, our study indicates that a survey of contemporary samples only (as undertaken for the majority of invasive species studies) would be insufficient to identify potential source populations and occurrence of multiple introductions.

Non-destructive DNA extraction from Chironomidae, including of fragile pupal exuviae, extends analysable collections and enhances vouchering

It is well established that the traditional taxonomy and nomenclature of Chironomidae relies on adult males whose usually characteristic genitalia provide evidence of species distinction. In the early days some names were based on female adults of variable distinctiveness – but females are difficult to identify (Ekrem et al. 2010) and many of these names remain dubious. In Russia especially, a system based on larval morphology grew in parallel to the conventional adult-based system. The systems became reconciled with the studies that underlay the production of the Holarctic generic keys to Chironomidae, commencing notably with the larval volume (Wiederholm, 1983). Ever since Thienemann’s pioneering studies, it has been evident that the pupa, notably the cast skins (exuviae) provide a wealth of features that can aid in identification (e.g. Wiederholm, 1986). Furthermore, the pupae can be readily associated with name-bearing adults when a pharate (‘cloaked’) adult stage is visible within the pupa. Association of larvae with the name-bearing later stages has been much more difficult, time-consuming and fraught with risk of failure. Yet it is identification of the larval stage that is needed by most applied researchers due to the value of the immature stages of the family in aquatic monitoring for water quality, although the pupal stage also has advocates (reviewed by Sinclair & Gresens, 2008). Few use the adult stage for such purposes as their provenance and association with the water body can be verified only by emergence trapping, and sampling of adults lies outside regular aquatic monitoring protocols.

Use of observed within-person variation of cardiac troponin in emergency department patients for determination of biological variation and percentage and absolute reference change values

BACKGROUND Many patients presenting to the emergency department (ED) for assessment of possible acute coronary syndrome (ACS) have low cardiac troponin concentrations that change very little on repeat blood draw. It is unclear if a lack of change in cardiac troponin concentration can be used to identify acutely presenting patients at low risk of ACS. METHODS We used the hs-cTnI assay from Abbott Diagnostics, which can detect cTnI in the blood of nearly all people. We identified a population of ED patients being assessed for ACS with repeat cTnI measurement who ultimately were proven to have no acute cardiac disease at the time of presentation. We used data from the repeat sampling to calculate total within-person CV (CV(T)) and, knowing the assay analytical CV (CV(A)), we could calculate within-person biological variation (CV(i)), reference change values (RCVs), and absolute RCV delta cTnI concentrations. RESULTS We had data sets on 283 patients. Men and women had similar CV(i) values of approximately 14%, which was similar at all concentrations <40 ng/L. The biological variation was not dependent on the time interval between sample collections (t = 1.5-17 h). The absolute delta critical reference change value was similar no matter what the initial cTnI concentration was. More than 90% of subjects had a critical reference change value <5 ng/L, and 97% had values of <10 ng/L. CONCLUSIONS With this hs-cTnI assay, delta cTnI seems to be a useful tool for rapidly identifying ED patients at low risk for possible ACS.

Biological Survey of the Panama Canal Zone (1911)

With the cooperation of several of the executive departments, and of the Field Museum of Natural History, a party of about 10 naturalists was accordingly sent to the zone, and the results so far accomplished have been very satisfactory. Large collections of biological material have been received, including specimens of a considerable number of genera and species new to science. It also seemed important to determine exactly the geographical distribution of the various organisms inhabiting the Isthmus, which is one of the routes by which the animals and plants of South America have entered North America and vice versa. The estimated cost of the survey which would have to be met by the Institution is $11,000...

Biological survey of the Panama Canal Zone (1912)

At first it was intended to confine the collections to the Canal Zone proper, but as the faunal and floral areas extended to the north and south of this region, it was decided to carry the work into the Republic of Panama, a step which met with the hearty approval of that Republic. The work accomplished has been very valuable to science, including collections and observations of vertebrate animals, land and fresh water mollusks, and plants, including flowering plants, grasses and ferns. Special attention will be given during the coming season to vertebrate animals, insects, crustaceans, rotifers and other minute freshwater animals, and also to the microscopic plants known as diatoms. Includes appendix of papers that resulted.

Catalogue of the Archives of the Marine Biological Association. Occasional Publication of the Marine Biological Association 5

A 64-page catalogue of material in the MBA Archive Collection containing details of documents, records, and personal papers relating to the history and development of the Marine Biological Association.