Population Genetic Structure of the Marine Penaeid Prawn- Penaeus Indicus H. Milne Edwards 1837

The thesis contains the results of an investigation on the " Population Genetic Structure of the Penaeus indicus " from southeast and southwest coasts of India. The P.indicus, popularly known as the Indian white prawn, is distributed widely in the Indo-Pacific, starting from New South wales in Australia in the east to the east coast of Africa in the west. Its heavy demand in the export market, the species has been exploited intensively from all along its areas of distribution in Indian waters. The population genetic characteristics of the species were examined by three independent but complementary techniques, namely, morphometrics (truss network), biochemical genetics (isozyme electrophoresis ) and molecular genetics (RFLP and RAPD). The east and west coast populations of the species may be genetically different. Due to certain constraints, the results obtained from the studies of restriction fragment length 70 polymorphism (RFLP) were limited. The significant difference in the number of bands in the sample populations strongly suggests that these two populations have considerably different population genetic structures

Studies on biochemical genetics of the grey mullet Mugil cephalus linnaeus

The thesis deals with the results of an investigation on the "BIOCHEMICAL GENETICS OF MUGIL CEPHALUS" from Cochin, Madras and Orissa. It is presented under the following major headings: Introduction, Review of Literature, Materials and Methods, Results, Discussions, Conclusions, Recommendations, Summary and References.The introduction gives a brief account of historical and modern back ground on the stock concept in fisheries research and management, followed by the importance and potential role of biochemical genetics in the identification of natural units of fisheries management. In the review of literature published reports relevant to biochemical genetics with special reference to that of general proteins and enzyme systems of fish populations were considered. A detailed account of the source of experimental specimens, mode of collection, transportation, sample extraction, gel preparation/gel electrophoresis, buffer systems, staining procedures of proteins/enzymes, standardization of experiments, interpretation of electrophoretic data using basic formulae etc. are given in the materials and methods section. Four important conclusions were drawn on the basis of the results of the present investigation. Three recommendations were also made on the basis of evaluation of the results.

Biochemical Genetics Of Selected Commercially Important Penaeid Prawns

���Biochemical genetics of selected commercially important penaeid prawns��� dloted was carried out by collecting samples from different important fishing ceatres of India and the practical work was carried out in the Research Centre of CMFRI laboratories attached with those places. On the whole, in crustacea little importance has been given so far in finding out tin genetic characteristics of different species, genetic variation within and between species and ontogenetic variations in lobsters, prawns and other crustaceans. Prawn is caunercially important group where very little attention had been given so far to find out the racial divergence which may exist in cufferent species. with the increased foreign exchange earning and consequent indiscriminate over exploitation of existing resources of prawns resulting in depletion of the marine rescurces, alternative ways and augmenting production has become essential. In this connection genetic manipulation of the broodstock will surely bring about the heterogenous characters to multiply production. In order to understand racial fragmentation of sane of the coumercially important prawns such as Pengeus ggdicus and Parggenagsis sgliferg the isozyme studies were carried out. Qatogenetic variation of g. indicus showed stage specific electrophoretic variation. Inter species variation studies was carried out for the closely aligned Penaeus species

Genetic diversity among different clones of the gynogenetic silver crucian carp, Carassius auratus gibelio, revealed by transferrin and isozyme markers

Genetic diversity among four clones (A, D, E, F) of gynogenetic silver crucian carp was studied using transferrin and isozymes in the blood as markers. Of the five proteins investigated, three (transferrin, esterase and superoxide dismutase) indicated polymorphism and eight polymorphic loci were detected. These loci were probably encoded by codominant alleles and their inheritance patterns were analyzed. Intraclonal homogeneity and interclonal heterogeneity were observed in these clones, which allowed us to infer the clonal nature and evolutionary relationship between them. Clonal diversity in this population of silver crucian carp in China was also compared with data reported from gynogenetic crucian carp in Germany.

Polimorfismos del gen Butirilcolinesterasa responsables de reacciones adversas en pacientes consumidores de ���coca��na���

La butirilcolinesterasa humana (BChE; EC 3.1.1.8) es una enzima polim��rfica sintetizada en el h��gado y en el tejido adiposo, ampliamente distribuida en el organismo y encargada de hidrolizar algunos ��steres de colina como la proca��na, ��steres alif��ticos como el ��cido acetilsalic��lico, f��rmacos como la metilprednisolona, el mivacurium y la succinilcolina y drogas de uso y/o abuso como la hero��na y la coca��na. Es codificada por el gen BCHE (OMIM 177400), habi��ndose identificado m��s de 100 variantes, algunas no estudiadas plenamente, adem��s de la forma m��s frecuente, llamada usual o silvestre. Diferentes polimorfismos del gen BCHE se han relacionado con la s��ntesis de enzimas con niveles variados de actividad catal��tica. Las bases moleculares de algunas de esas variantes gen��ticas han sido reportadas, entre las que se encuentra las variantes At��pica (A), fluoruro-resistente del tipo 1 y 2 (F-1 y F-2), silente (S), Kalow (K), James (J) y Hammersmith (H). En este estudio, en un grupo de pacientes se aplic�� el instrumento validado Lifetime Severity Index for Cocaine Use Disorder (LSI-C) para evaluar la gravedad del consumo de ���coca��na��� a lo largo de la vida. Adem��s, se determinaron Polimorfismos de Nucle��tido Simple (SNPs) en el gen BCHE conocidos como responsables de reacciones adversas en pacientes consumidores de ���coca��na��� mediante secuenciaci��n del gen y se predijo el efecto delos SNPs sobre la funci��n y la estructura de la prote��na, mediante el uso de herramientas bio-inform��ticas. El instrumento LSI-C ofreci�� resultados en cuatro dimensiones: consumo a lo largo de la vida, consumo reciente, dependencia psicol��gica e intento de abandono del consumo. Los estudios de an��lisis molecular permitieron observar dos SNPs codificantes (cSNPs) no sin��nimos en el 27.3% de la muestra, c.293A>G (p.Asp98Gly) y c.1699G>A (p.Ala567Thr), localizados en los exones 2 y 4, que corresponden, desde el punto de vista funcional, a la variante At��pica (A) [dbSNP: rs1799807] y a la variante Kalow (K) [dbSNP: rs1803274] de la enzima BChE, respectivamente. Los estudios de predicci��n In silico establecieron para el SNP p.Asp98Gly un car��cter patog��nico, mientras que para el SNP p.Ala567Thr, mostraron un comportamiento neutro. El an��lisis de los resultados permite proponer la existencia de una relaci��n entre polimorfismos o variantes gen��ticas responsables de una baja actividad catal��tica y/o baja concentraci��n plasm��tica de la enzima BChE y algunas de las reacciones adversas ocurridas en pacientes consumidores de coca��na.

Biochemical and Behavioral Evaluation of Human MAPT Mutations in Transgenic Drosophila melanogaster

Mutations in the human microtubule-associated protein tau (hMAPT) gene including R406W and V337M result in autosomal dominant neurodegenerative disorder. These mutations lead to hyperphosphorylation and aggregation of Tau protein which is a known genetic factor underlying development of Alzheimer's disease (AD). In the present study, transgenic Drosophila models of AD expressing wild-type and mutant forms of hMAPT exhibit a progressive neurodegeneration which was manifested in the form of early death and impairment of cognitive ability. Moreover, they were also found to have significantly decreased activity of neurotransmitter enzymes accompanied by decreased cellular endogenous antioxidant profile. The extent of neurodegeneration, memory impairment, and biochemical profiles was different in the tau transgenic strains which indicate multiple molecular and cellular responses underlie each particular form of hMAPT.

Capillary electrophoresis with boron doped diamond electrode for amperometric detection of low molecular weight biological substrate

The research work in this thesis included the sensitive and selective separation of biological substance by capillary electrophoresis with a boron doped diamond electrode for amperometric detection. Chapter 1 introduced the capillary electrophoresis and electrochemical detection. It included the different modes of capillary electrophoresis, polyelectrolyte multilayers coating for open tubular capillary electrochromatography, different modes of electrochemical detection and carbon based electrodes. Chapter 2 showed the synthesized and electropolymerized N-acetyltyramine with a negatively charged sulfobutylether-��-cyclodextrin on a boron doped diamond (BDD) electrode followed by the electropolymerzation of pyrrole to form a stable and permselective film for selective dopamine detection. For comparison, a glassy carbon (GC) electrode with a combined electropolymerized permselective film of polytyramine and polypyrrole-1-propionic acid was used for selective detection of dopamine. The detection limit of dopamine was improved from 100 nM at a GC electrode to 5 nM at a BDD electrode. Chapter 3 showed field-amplified sample stacking using a fused silica capillary coated with gold nanoparticles embedded in poly(diallyldimethylammonium) chloride, which has been investigated for the electrophoretic separation of indoxyl sulphate, homovanillic acid and vanillylmandelic acid. The detection limit of the three analytes obtained by using a boron doped diamond electrode was around 75 nM, which was significantly below their normal physiological levels in biological fluids. This combined separation and detection scheme was applied to the direct analysis of these analytes and other interfereing chemicals including uric and ascorbic acids in urine samples without off-line sample treatment or preconcentration. Chapter 4 showed the selective detection of Pseudomonas Quinolone Signal, PQS for quorum sensing from its precursor HHQ, using a simply boron doped diamond electrode. Furthermore, by combining poly(diallyldimethylammonium) chloride modified fused silica capillary with a BDD electrode for amperometric detection, PQS was separated from HHQ and other analogues. The detection limit of PQS was as low as 65 nM. Different P. aeruginosa mutant strains were studied. Chapter 5 showed the separation of aminothiols by layer-by-layer coating of silica capillary with a boron doped diamond electrode. The capillary was layer-by-layer coated with the polycation poly(diallyldimethylammonium) chloride and negatively charged silica nanoparticles. All the aminothiols was separated and detected using a BDD electrode in an acidic electrolyte. It was a novel scheme for the separation and detection of glutathione reduced and oxidized forms, which is important for estimated overstressed level in the human system.

Variation of genetic expression during development, revealed by esterase patterns in Aedes aegypti (Diptera, Culicidae)

Polyacrylamide gel electrophoresis was used to analyze esterase patterns during development of Aedes aegypti from the cities of Mar��lia and S��o Jos�� do Rio Preto (SJRP), Brazil. The zymograms showed a total of 23 esterase bands, 22 of which were in the specimens from Mar��lia and 19 in those from SJRP. These esterase bands were considered to be the product of 23 alleles distributed tentatively in eight genetic loci. Most of the alleles were developmentally regulated. The larval stage expressed the greatest number of them (19 alleles, from the eight loci, in Mar��lia; and 17 alleles, from seven loci, in SJRP). The pupal stage expressed 10 alleles from seven loci, in both populations, and the adult stage expressed 8 alleles from five and six loci in SJRP and Mar��lia, respectively. Some alleles that were active in every stage were developmentally controlled at the level of expression (amount of product). A single allele was constitutively and highly expressed, in larvae, pupae, and adults, in both populations. Differences in esterase synthesis among stages are probably due to regulatory mechanisms acting in agreement with the requirements of a variable number of processes in which esterases are involved. The larval stage is the most active in developmental processes and shows very intense intake of food and very high mobility. These features may demand increased esterase production at that stage. Comparison of the two populations examined showed (besides the existence of alleles that they do not share) that they exhibit differences in the control of expression of other alleles. Such findings may reflect genetic differences between founders in each population, but the possibility of involvement of the intensive use of insecticides in SJRP is also discussed.

Spawning of yellowfin tuna and the discrimination of subpopulations

ENGLISH: The spawning of yellowfin tuna (Thunnus albacares) in the eastern Pacific Ocean was examined to ascertain the existence of separate subpopulations within this area. Investigations of biochemical genetics of yellowfin indicate that there are a number of genetically distinct groups in the eastern Pacific. In addition, yellowfin belong to two recruitment cohorts, X and Y, which are composed of a mixture of these genetically different groups. Spawning data were collected from 1956 through 1961 from the coastal fishing grounds, and from 1970 through 1973 from the offshore fishing areas. Temporal and spatial aspects of spawning of the fish of the two cohorts were analyzed to determine if yellowfin spawning behavior supports the existence of genetically separate subpopulations. Spawning condition was inferred from the maturity of the ovaries. It was found that the coastal fish of each cohort exhibit at least two spawning periods per year which vary in length and time of occurrence from year to year. Fish taken from the offshore fishing grounds did not exhibit this variable spawning pattern. Although samples were not available for all months, the data showed that each cohort has a spawning period of at least 7 months and may spawn year around. Samples from offshore areas also had much higher percentages of spawners than those from the coastal areas. Temporal differences in spawning are not maintaining the genetically separate groups found in the fishery, since fish of both recruitment cohorts spawn at the same time. Also, fish of both the X and Y cohorts spawned in all areas examined; however, these data are insufficient to determine whether spatial isolation of spawning groups is occurring within the areas. SPANISH: Se examin�� el desove del at��n aleta amarilla (Thunnus albacares) en el Oc��ano Pac��fico oriental para averiguar la existencia de subpoblaciones separadas en esta zona. La investigaci��n gen��tica bioqu��mica del aleta amarilla indica que existen varios grupos gen��ticamente distintos en el Pac��fico oriental. Adem��s, el aleta amarilla pertenece a dos cohortes de reclutamiento X e Y, formadas por una mezcla de estos grupos gen��ticamente diferentes. Los datos del desove fueron obtenidos de 1956 a 1961, en las regiones ner��ticas de pesca y desde 1970 a 1973, en las ��reas oce��nicas de pesca. Se analizaron los aspectos temporales y espaciales del desove de los peces de las dos cohortes, para determinar si el comportamiento reproductor del aleta amarilla, apoya la existencia de subpoblaciones gen��ticamente diferentes. Se deriv�� la condici��n del desove seg��n la madurez de los ovarios. Se encontr�� que los peces costeros de cada cohorte exhib��an por lo menos dos per��odos anuales de desove que var��an en duraci��n y fecha de ocurrencia de un a��o a otro. Los peces capturados en las regiones oce��nicas de pesca no exhibieron este patr��n variable de desove. Aunque o se consiguieron muestras en todos los meses, los datos indican que cada cohorte tiene un per��odo de desove por lo menos de 7 meses y puede que desoven durante todo el a��o. Las muestras de las regiones oce��nicas tuvieron porcentajes mucho mayores de reproductores que los de las zonas ner��ticas. Las diferencias temporales en el desove no sirven para explicar la presencia de grupos gen��ticamente separados que se encuentran en la pesca, ya que los peces de ambas cohortes de reclutamiento desovan al mismo tiempo. Adem��s, los peces de ambas cohortes (X e Y) desovan en todas las zonas examinadas; sin embargo, estos datos no son suficientes para determinar si el aislamiento de los grupos de desove ocurre en las zonas. (PDF contains 53 pages.)