Revision of Affecauda Hall & Chambers, 1999 (Digenea: Gyliauchenidae Fukui, 1929), including the description of two new species from fishes of the Indo-West Pacific

We describe 2 new species of Affecauda from the intestine of acanthuroid fishes of the Indo-West Pacific. Affecauda rugosa n. sp. is described from 1 mature specimen in excellent condition and 1 immature fractured specimen from the intestine of the sailfin tang, Zebrasoma veliferum (Acanthuridae), from Noumea, New Caledonia. Affecauda salacia n. sp. is described from the intestine of the ocellated spinefoot, Siganus corallinus (Siganidae), from Lizard Island, Great Barrier Reef, Queensland, Australia. Each of these species is made distinct from the type-species, Affecauda annulata Hall & Chambers, 1999, by combinations of the extent of tegumental annulations, conformation of the oesophagus and position of the ovary. The description of 2 new species of Affecauda necessitates a revision of the generic diagnosis, which is here amended to incorporate the additional species. A key to species is provided. The description of further species of Affecauda from waters external to the Great Barrier Reef and from siganid fishes expands the biogeographical range for species of Affecauda, from species of Naso on the Great Barrier Reef, to acanthuroid fishes of the western Pacific.

New alk genes detected in Antarctic marine sediments

Alkane monooxygenases (Alk) are the key enzymes for alkane degradation. In order to understand the dispersion and diversity of alk genes in Antarctic marine environments, this study analysed by clone libraries the presence and diversity of alk genes (alkB and alkM) in sediments from Admiralty Bay, King George Island, Peninsula Antarctica. The results show a differential distribution of alk genes between the sites, and the predominant presence of new alk genes, mainly in the pristine site. Sequences presented 53.10-69.60% nucleotide identity and 50.90-73.40% amino acid identity to alkB genes described in Silicibacter pomeroyi, Gordonia sp., Prauserella rugosa, Nocardioides sp., Rhodococcus sp., Nocardia farcinica, Pseudomonas putida, Acidisphaera sp., Alcanivorax borkumensis, and alkM described in Acinetobacter sp. This is the first time that the gene alkM was detected and described in Antarctic marine environments. The presence of a range of previously undescribed alk genes indicates the need for further studies in this environment.

Neogene benthic foraminifera in the Southwest Pacific

Early Miocene to Quaternary benthic foraminifers have been quantitatively studied (>63 ?m size fraction) in a southwest Pacific traverse of DSDP sites at depths from about 1300 to 3200 m down the Lord Howe Rise (Site 590,1299 m; Site 591, 2131 m; Site 206, 3196 m). Benthic foraminiferal species smaller than 150 µm are by far dominant in the samples, averaging from 78 to 89% of the total benthic foraminiferal assemblages in the three sites examined. Although about 150 benthic foraminiferal species or taxonomic groups have been identified, only a few species dominate the assemblages. These dominant species include Epistominella exigua, E. rotunda, and Globocassidulina subglobosa, which prevail in the three sites, and Oridorsalis umbonatus, E. umbonifera, and Cassidulina carinata, which occur usually in frequencies of between 10 and 30%. Faunal changes in Neogene benthic foraminiferal assemblages are not similar in each of the three sites, but faunal successions are most similar between the two shallowest sites. The deepest site differs in composition and distribution of dominant species. There are three intervals during which the most important changes occur in benthic foraminiferal assemblages: the early middle Miocene (14 Ma; the Orbulina suturalis Zone and the Globorotalia fohsi s.l. Zone); the late Miocene (6 Ma; the Globigerina nepenthes Zone) and near the Pliocene/Pleistocene boundary at about 2 Ma. A Q-mode factor analysis of the faunal data has assisted in recognizing assemblage changes during the Neogene at each of the sites. Early Miocene assemblages were dominated by Globocassidulina subglobosa at Site 590 (1299 m), by G. subglobosa and Oridorsalis umbonatus at Site 591 (2131 m), and by G. subglobosa, E. exigua, and Bolivina pusilla at Site 206 (3196 m). In the early middle Miocene at Sites 590 and 591, a marked increase occurred in the frequencies of E. exigua. Epistominella exigua reached maximum abundance in the early Miocene in the deeper Site 206, and in the middle and early late Miocene in the shallower Sites 590 and 591. In the late Miocene, a spike occurred in the frequencies of E. umbonifera in Site 206, whereas the dominant species changed from E. exigua to E. rotunda at Site 590. Latest Miocene to late Pliocene assemblages were dominated by E. rotunda at Site 590, by E. exigua at Site 591, and by G. subglobosa-E. exigua (early Pliocene) and E. rotunda-E. exigua (late Pliocene) at Site 206. At the Pliocene/Pleistocene boundary, E. exigua temporarily diminished in importance at Sites 591 and 206. Quaternary assemblages were dominated by E. rotunda and Cassidulina carinata at Site 590, by E. rotunda at Site 591, and by E. exigua at Site 206. These major faunal changes are all associated with known major paleoceanographic events-the middle Miocene development of the Antarctic ice sheet; the latest Miocene global cooling and increased polar glaciation; and the onset of quasiperiodic glaciation of the Northern Hemisphere. These major paleoceanographic events undoubtedly had a profound effect on the intermediate and deep water mass structure of the Tasman Sea as recorded by changes in benthic foraminiferal assemblages.

Benthic foraminifera stratigraphy of sediments from ODP Leg 199 sites

Benthic foraminifers from Ocean Drilling Program Leg 199 Holes 1215A, 1220B, and 1221C were examined across the Paleocene/Eocene boundary. Assemblages were studied in 240 samples. The benthic foraminiferal extinction event that correlates with the Paleocene/Eocene epoch boundary was recognized at these sites. Benthic assemblages before the event are characterized by high diversity, but those after the event are low in diversity. An assemblage of agglutinated foraminifers without carbonate cement was recognized at Sites 1220 and 1221. These assemblages were typically found after the event. The discovery of such agglutinated assemblages has never been reported before at this boundary.

Early - Late Miocene palaeoclimate data and palaefloras of 48 samples from Southern China

Southern China, especially Yunnan, has undergone high tectonic activity caused by the uplift of Himalayan Mountains during the Neogene, which led to a fast changing palaeogeography. Previous study shows that Southern China has been influenced by the Asian Monsoon since at least the Early Miocene. However, it is yet not well understood how intense the Miocene monsoon system was. In the present study, 63 fossil floras of 16 localities from Southern China are compiled and evaluated for obtaining available information concerning floristic composition, stratigraphic age, sedimentology, etc. Based on such reliable information, selected mega- and micro-floras have been analysed with the coexistence approach to obtain quantitative palaeoclimate data. Visualization of climate results in maps shows a distinct spatial differentiation in Southern China during the Miocene. Higher seasonalities of temperature and precipitation occur in the north and south parts of Southern China, respectively. During the Miocene, most regions of Southern China and Europe were both warm and humid. Central Eurasia was likely to be an arid center, which gradually spread westward and eastward. Our data provide information about Miocene climate patterns in Southern China and about the evolution of these patterns throughout the Miocene, and is also crucial to unravel and understand the climatic signals of global cooling and tectonic uplift.

Neogene benthic foraminiferal faunas of a southwest Pacific bathyal depth transect

Temporal changes in benthic foraminiferal assemblages were quantitatively examined (> 63 µm fraction) in four southwest Pacific deep-sea Neogene sequences in a depth transect between approximately 1300 and 3200 m to assist in evaluating paleoeeanographic history. The most conspicuous changes in benthic foraminiferal assemblages occurred in association with paleoclimatic changes defined at least in part by oxygen isotopic changes. The largest, centered at ~15 Ma (early Middle Miocene), is represented by an increase in the relative frequencies of Epistominella exigua, which underwent a major upward depth migration at that time. This was contemporaneous with the well-known positive oxygen isotopic shift in the early Middle Miocene. In Sites 588 and 590, most of the increase in relative abundances of E. exigua occurred during the middle to later part of the ~80 shift, following major growth of the east Antarctic ice sheet. Later assemblage changes occurred at 8.5 and 6.5 Ma. These associations indicate that the benthic foraminiferal assemblages in this depth transect largely adjusted to changes in deep waters related to Antarctic cryospheric evolution. In general, the Neogene benthic foraminiferal assemblages in this region underwent little change during the last 23 million years. This faunal conservatism suggests that deep-sea environments underwent relatively little change in the southwest Pacific during much of the Neogene. Although paleoceanographic changes did occur, partly in response to highlatitude cryospheric evolution, these were not of sufficient magnitude to create major deep-sea faunal changes in this part of the ocean. The benthic foraminiferal assemblages are dominated by individuals smaller than 150 µm. Most taxonomic turnover occurred in the larger (> 150 µm) size fractions.

Late Cretaceous benthic foraminiferal assemblages from Demerara Rise, western tropical Atlantic

This paper is based on Santonian-Campanian sediments of Ocean Drilling Program Sites 1257 (2951 mbsl) and 1259 (2353 mbsl) from Demerara Rise (Leg 207, western tropical Atlantic, off Surinam). According to its position, Demerara Rise should have been influenced by the early opening of the Equatorial Atlantic Gateway and the establishment of a bottom-water connection between the central and South Atlantic Oceans during the Late Cretaceous. The investigated benthic foraminiferal faunas demonstrate strong fluctuations in bottom-water oxygenation and organic-matter flux to the sea-floor. The Santonian-earliest Campanian interval is characterised by laminated black shales without benthic foraminifera in the lowermost part, followed by an increasing number of benthic foraminifera. These are indicative of anoxic to dysoxic bottom waters, high organic-matter fluxes and a position within the oxygen minimum zone. At the shallower Site 1259, benthic foraminifera occurred earlier (Santonian) than at the deeper Site 1257 (Early Campanian). This suggests that the shallower site was characterised by fluctuations in the oxygen minimum zone and that a re-oxygenation of the sea-floor started considerably earlier at shallower water-depths. We speculate that this re-oxygenation was related to the ongoing opening of the Equatorial Atlantic Gateway. A condensed glauconitic chalk interval of Early Campanian age (Nannofossil Zone CC18 of Sissingh) overlies the laminated shales at both sites. This interval contains benthic foraminiferal faunas reflecting increasing bottom-water oxygenation and reduced organic-matter flux. This glauconitic chalk is strongly condensed and contains most of the Lower and mid-Campanian. Benthic foraminiferal species indicative of well-oxygenated and more oligotrophic environments characterise the overlying mid- to Upper Campanian nannofossil chalk. During deposition of the nannofossil chalk, a permanent deep-water connection between the central and South Atlantic Oceans is proposed, leading to ventilated and well-oxygenated bottom waters. If this speculation is true, the establishment of a permanent deep-water connection between the central and South Atlantic Oceans terminated Oceanic Anoxic Event 3 "black shale" formation in the central and South Atlantic marginal basins during the Early Campanian (Nannofossil Zone CC18) and led to well-oxygenated bottom waters in the entire Atlantic Ocean during the Late Campanian (at least from Nannofossil Zone CC22 onwards).

Benthic foraminifera extinctions in the Cenozoic record

In the late Pliocene-middle Pleistocene a group of 95 species of elongate, cylindrical, deep-sea (lower bathyal-abyssal) benthic foraminifera became extinct. This Extinction Group (Ext. Gp), belonging to three families (all the Stilostomellidae and Pleurostomellidae, some of the Nodosariidae), was a major component (20-70%) of deep-sea foraminiferal assemblages in the middle Cenozoic and subsequently declined in abundance and species richness before finally disappearing almost completely during the mid-Pleistocene Climatic Transition (MPT). So what caused these declines and extinction? In this study 127 Ext. Gp species are identified from eight Cenozoic bathyal and abyssal sequences in the North Atlantic and equatorial Pacific Oceans. Most species are long-ranging with 80% originating in the Eocene or earlier. The greatest abundance and diversity of the Ext. Gp was in the warm oceanic conditions of the middle Eocene-early Oligocene. The group was subjected to significant changes in the composition of the faunal dominants and slightly enhanced species turnover during and soon after the rapid Eocene-Oligocene cooling event. Declines in the relative abundance and flux of the Ext. Gp, together with enhanced species loss, occurred during middle-late Miocene cooling, particularly at abyssal sites. The overall number of Ext. Gp species present began declining earlier at mid abyssal depths (in middle Miocene) than at upper abyssal (in late Pliocene-early Pleistocene) and then lower bathyal depths (in MPT). By far the most significant Ext. Gp declines in abundance and species loss occurred during the more severe glacial stages of the late Pliocene-middle Pleistocene. Clearly, the decline and extinction of this group of deep-sea foraminifera was related to the function of their specialized apertures and the stepwise cooling of global climate and deep water. We infer that the apertural modifications may be related to the method of food collection or processing, and that the extinctions may have resulted from the decline or loss of their specific phytoplankton or prokaryote food source, that was more directly impacted than the foraminifera by the cooling temperatures.