Os BRICS na perspectiva geopolítica: uma análise cientométrica de 2001 a 2010

Pós-graduação em Ciência da Informação - FFC

A tradução de termos simples, expressões fixas e semifixas em um corpus paralelo da área de sensoriamento remoto: uma proposta de glossário bilíngue

Pós-graduação em Estudos Linguísticos - IBILCE

Validação das unidades arbitrárias de teor de clorofilas obtido em folhas intactas de seringueira

The determination of foliar chlorophyll content is a characteristic that interests ecophysiologists and rural producers. With consideration for practical uses as well as scientific publications, our present work aims to establish equations, for rubber tree leaves, that can convert arbitrary units of expressing chlorophyll content to the international system. Chlorophyll a (Chla), chlorophyll b (Chlb), and total chlorophyll (Chltot) were obtained from intact leaves using a portable chlorophyll detecting instrument. Leaves from different positions on the plant, at various stages of maturity, and representing a large spectrum of pigment concentrations, were collected and analyzed in the field using the Clorofil OG Falkner ® instrument, through four evaluations in forty-five medium leaflets. At the laboratory, leaflets underwent a process of pigment extraction. They were incubated in a water-bath with dimethylsulfoxide (DMSO), dosed in molecular absorption spectrophotometer, and converted into pigment content per unit of fresh weight using conventional equations. The data were evaluated according to the Pearson correlation coefficient and tested with different regression models. For all variables, the linear fit is the most adequate, with correlation coefficients (r) 0.74 for Chlb and 0.88 for Chla and Chltott.

Validação das unidades arbitrárias do teor de clorofilas obtido em folhas intactas de seringueira

The determination of foliar chlorophyll content is a characteristic that interests ecophysiologists and rural producers. With consideration for practical uses as well as scientific publications, our present work aims to establish equations, for rubber tree leaves, that can convert arbitrary units of expressing chlorophyll content to the international system. Chlorophyll a (Chla), chlorophyll b (Chlb), and total chlorophyll (Chltot) were obtained from intact leaves using a portable chlorophyll detecting instrument. Leaves from different positions on the plant, at various stages of maturity, and representing a large spectrum of pigment concentrations, were collected and analyzed in the field using the Clorofil OG Falkner ® instrument, through four evaluations in forty-five medium leaflets. At the laboratory, leaflets underwent a process of pigment extraction. They were incubated in a water-bath with dimethylsulfoxide (DMSO), dosed in molecular absorption spectrophotometer, and converted into pigment content per unit of fresh weight using conventional equations. The data were evaluated according to the Pearson correlation coefficient and tested with different regression models. For all variables, the linear fit is the most adequate, with correlation coefficients (r) 0.74 for Chlb and 0.88 for Chla and Chltott .

A pesca na Amazônia ocidental: tratamento terminológico dos termos fundamentais

Fishing is a very important activity in terms of economic and social development throughout the Amazon region. Text reading this topic revealed the presence of a terminology not yet systematized and record little research and scientific publications on the terminology of this activity. This article aims at analyzing the key terms of fishing. At first, we present a brief history of this activity in Western Amazonia, particularly in Rondônia. The theoretical support was guided by Cabré (1999), with her Communicative Theory of Terminology, Aubert (1996), Barbosa (2002), Barros (2004), Biderman (2006), Babini (2006) and linguists as Baldinger (1966) and Pottier (1974) that reveal the details of linguistic analysis terminology. The creation of an electronic corpus, from texts of technical and documental discourse, theses and websites, composed the first stage of our work. Afterwards, collect the terms and fill the terminological records in our database. The terms were organized into a conceptual system with three notional fields: riverside community, type of fishing, gillnet fishing. Early results show that the set of terms collected is characterized by the strong presence of simple and complex terms, and less compound terms.

O apoio institucional como uma das faces da função apoio no Núcleo de Apoio à Saúde da Família (NASF): para além das diretrizes

The aim of this study was to add to the debate about Family Health Support Centers (FHSCs), starting from reflections about the support function. Support is generally presented, in official documents from the Ministry of Health and in academic-scientific publications, accompanied by descriptors that characterize it. Differences in terminology are commonly encountered: “institutional support”, “managerial support”, “matrix support” and so on. With regard to FHSCs, published papers have highlighted the central role played by matrix support. However, we pose the question: what are the faces that the support function has been taking on in implementing such programs? To reflect on this and other issues, we developed a study of qualitative nature within a FHSC team in Paraná, outside of the state capital, using the methodological tools of participant observation, semi-structured interviews and discussion groups. We sought to demonstrate that the dynamics of the support function in FHSCs make it possible for both matrix support and institutional support to emerge.

As influências da paisagem urbana em grupos funcionais e riqueza de aves

Pós-graduação em Biologia Animal - IBILCE

Aquisição e interpretação de dados geofísicos e geológicos em mina de manganês supergênicos na região de Itapira (SP)

The mineral sector is of utmost importance for Brazilian economic growth, an area which depends on basic geological research to enlarge known deposits and in process of mining, besides discovering new occurrences and mineral deposits. This set of activities is named mineral research, which planning involves economy concepts, market demands and use of methods and techniques for geological evaluation, direct and indirect. This paper aim at performing geophysical detailing on occurrences of supergenic manganese located in the northwest portion of the State of São Paulo, Itapira, for spatial dimensioning of mineral targets, besides the attempt to correlate among the content on physical parameter measured by geophysics. The lack of scientific publications by Brazilian researchers in this theme, availability of previous studies for the selected targets, commercial importance of the mineral goods for the Brazilian Trade Balance, justify the performance of the present research project

Use of music and play in pediatric nursing care in the hospital context

Objective. To identify and analyze scientific publications on the use of music and play in pediatric nursing care in the hospital context. Method. In this bibliographic study, papers were sought that were published in Portuguese or English between 2004 and 2009 and included the descriptors: hospitalized child, childhood, child recreation, nursing team, nursing, pediatric nursing, alternatives therapies, music, music therapy, play and playthings, play therapy, playing. For the review, the bibliographic databases used were MEDLINE, ScIELO and LILACS. Results. Seventeen publications were obtained, among which: 59% adopted a quantitative method; mainly nursing developed the activities (88%); per type of article, reviews on the theme and assessments of clinical changes associated with the use of music and play were frequent (59% and 18%, respectively); and the utility of this kind of therapies in nursing care is acknowledged (94%). Conclusion. Play and music are useful therapies that can be used in nursing care for pediatric patients.

Técnicas para obtenção e tratamento de macrofotografias de insetos

Workings related insects macro-photographs production are little widespread in the scientific community. However, the use of images has wide application, serving for scientific publications, conferences, courses, databases and development of illustrated identification keys. Thus, methodologies were developed to assist in capturing and processing highresolution images, improving its quality, without, however, their technical characteristics.

Research Blogging: Indexing and Registering the Change in Science 2.0

Increasing public interest in science information in a digital and 2.0 science era promotes a dramatically, rapid and deep change in science itself. The emergence and expansion of new technologies and internet-based tools is leading to new means to improve scientific methodology and communication, assessment, promotion and certification. It allows methods of acquisition, manipulation and storage, generating vast quantities of data that can further facilitate the research process. It also improves access to scientific results through information sharing and discussion. Content previously restricted only to specialists is now available to a wider audience. This context requires new management systems to make scientific knowledge more accessible and useable, including new measures to evaluate the reach of scientific information. The new science and research quality measures are strongly related to the new online technologies and services based in social media. Tools such as blogs, social bookmarks and online reference managers, Twitter and others offer alternative, transparent and more comprehensive information about the active interest, usage and reach of scientific publications. Another of these new filters is the Research Blogging platform, which was created in 2007 and now has over 1,230 active blogs, with over 26,960 entries posted about peer-reviewed research on subjects ranging from Anthropology to Zoology. This study takes a closer look at RB, in order to get insights into its contribution to the rapidly changing landscape of scientific communication.

Topological aspects of the human protein interaction network

It is currently widely accepted that the understanding of complex cell functions depends on an integrated network theoretical approach and not on an isolated view of the different molecular agents. Aim of this thesis was the examination of topological properties that mirror known biological aspects by depicting the human protein network with methods from graph- and network theory. The presented network is a partial human interactome of 9222 proteins and 36324 interactions, consisting of single interactions reliably extracted from peer-reviewed scientific publications. In general, one can focus on intra- or intermodular characteristics, where a functional module is defined as "a discrete entity whose function is separable from those of other modules". It is found that the presented human network is also scale-free and hierarchically organised, as shown for yeast networks before. The interactome also exhibits proteins with high betweenness and low connectivity which are biologically analyzed and interpreted here as shuttling proteins between organelles (e.g. ER to Golgi, internal ER protein translocation, peroxisomal import, nuclear pores import/export) for the first time. As an optimisation for finding proteins that connect modules, a new method is developed here based on proteins located between highly clustered regions, rather than regarding highly connected regions. As a proof of principle, the Mediator complex is found in first place, the prime example for a connector complex. Focusing on intramodular aspects, the measurement of k-clique communities discriminates overlapping modules very well. Twenty of the largest identified modules are analysed in detail and annotated to known biological structures (e.g. proteasome, the NFκB-, TGF-β complex). Additionally, two large and highly interconnected modules for signal transducer and transcription factor proteins are revealed, separated by known shuttling proteins. These proteins yield also the highest number of redundant shortcuts (by calculating the skeleton), exhibit the highest numbers of interactions and might constitute highly interconnected but spatially separated rich-clubs either for signal transduction or for transcription factors. This design principle allows manifold regulatory events for signal transduction and enables a high diversity of transcription events in the nucleus by a limited set of proteins. Altogether, biological aspects are mirrored by pure topological features, leading to a new view and to new methods that assist the annotation of proteins to biological functions, structures and subcellular localisations. As the human protein network is one of the most complex networks at all, these results will be fruitful for other fields of network theory and will help understanding complex network functions in general.

La valutazione della ricerca scientifica: Uno studio empirico nelle Scienze umane

Nel corso degli ultimi anni si è assistito ad un ampio dibattito sull’uso della valutazione della ricerca nelle università e nelle strutture di ricerca. Nell’ambito di tale dibattito, nella presente tesi, vengono analizzate le più importanti metodologie per la valutazione della ricerca presenti a livello internazionale, i principali strumenti qualitativi di valutazione della ricerca (in particolare la peer review), gli strumenti quantitativi, quali la bibliometria, e le caratteristiche dei più importanti archivi bibliografici citazionali (es. Scopus, Web of Science), approfondendo i principali indicatori citazionali utilizzati nelle scienze umane e sociali (es. Indice H). Inoltre la tesi affronta il tema dell’impatto socio-economico della ricerca e le principali criticità di questo innovativo strumento, attraverso uno studio di caso realizzato nel Regno Unito. Una successiva analisi empirica riguarda le principali liste di riviste realizzate a livello internazionale e nazionale, nel settore scientifico di Storia e Filosofia della scienza. I risultati degli studi mostrano che le liste internazionali di riviste possono rappresentare, un punto di partenza a cui devono necessariamente essere affiancati altri strumenti di valutazione (peer review, analisi citazionali, etc); mentre le liste nazionali rischiano, invece, di essere uno strumento poco utile ed in alcuni casi inadeguato al fine di una corretta valutazione della ricerca, a causa della scarsa internazionalizzazione dei repertori e dei giudizi generalmente troppo elevati attribuiti alle riviste. Un ulteriore risultato raggiunto nella presente tesi riguarda la valutazione della ricerca nelle diverse discipline scientifiche: nelle Scienze umane e sociali risulta esserci uno scarso grado di presenza di pubblicazioni scientifiche nei principali archivi bibliografici e citazionali internazionali. Questa situazione limita fortemente l’attendibilità delle analisi statistiche basate su indici e indicatori quantitativi, per valutare la produttività scientifica di un ricercatore, oppure di una istituzione di ricerca.

Methods and strategies to identify the mode of action of phytoactive compounds

Small molecules affecting biological processes in plants are widely used in agricultural practice as herbicides or plant growth regulators and in basic plant sciences as probes to study the physiology of plants. Most of the compounds were identified in large screens by the agrochemical industry, as phytoactive natural products and more recently, novel phytoactive compounds originated from academic research by chemical screens performed to induce specific phenotypes of interest. The aim of the present PhD thesis is to evaluate different approaches used for the identification of the primary mode of action (MoA) of a phytoactive compound. Based on the methodologies used for MoA identification, three approaches are discerned: a phenotyping approach, an approach based on a genetic screen and a biochemical screening approach.rnFour scientific publications resulting from my work are presented as examples of how a phenotyping approach can successfully be applied to describe the plant MoA of different compounds in detail.rnI. A subgroup of cyanoacrylates has been discovered as plant growth inhibitors. A set of bioassays indicated a specific effect on cell division. Cytological investigations of the cell division process in plant cell cultures, studies of microtubule assembly with green fluorescent protein marker lines in vivo and cross resistant studies with Eleusine indica plants harbouring a mutation in alpha-tubulin, led to the description of alpha-tubulin as a target site of cyanoacrylates (Tresch et al., 2005).rnII. The MoA of the herbicide flamprop-m-methyl was not known so far. The studies described in Tresch et al. (2008) indicate a primary effect on cell division. Detailed studies unravelled a specific effect on mitotic microtubule figures, causing a block in cell division. In contrast to other inhibitors of microtubule rearrangement such as dinitroanilines, flamprop-m-methyl did not influence microtubule assembly in vitro. An influence of flamprop-m-methyl on a target within the cytoskeleton signalling network could be proposed (Tresch et al., 2008).rnIII. The herbicide endothall is a protein phosphatase inhibitor structurally related to the natural product cantharidin. Bioassay studies indicated a dominant effect on dark-growing cells that was unrelated to effects observed in the light. Cytological characterisation of the microtubule cytoskeleton in corn tissue and heterotrophic tobacco cells showed a specific effect of endothall on mitotic spindle formation and ultrastructure of the nucleus in combination with a decrease of the proliferation index. The observed effects are similar to those of other protein phosphatase inhibitors such as cantharidin and the structurally different okadaic acid. Additionally, the observed effects show similarities to knock-out lines of the TON1 pathway, a protein phosphatase-regulated signalling pathway. The data presented in Tresch et al. (2011) associate endothall’s known in vitro inhibition of protein phosphatases with in vivo-effects and suggest an interaction between endothall and the TON1 pathway.rnIV. Mefluidide as a plant growth regulator induces growth retardation and a specific phenotype indicating an inhibition of fatty acid biosynthesis. A test of the cuticle functionality suggested a defect in the biosynthesis of very-long-chain fatty acids (VLCFA) or waxes. Metabolic profiling studies showed similarities with different groups of VLCFA synthesis inhibitors. Detailed analyses of VLCFA composition in tissues of duckweed (Lemna paucicostata) indicated a specific inhibition of the known herbicide target 3 ketoacyl-CoA synthase (KCS). Inhibitor studies using a yeast expression system established for plant KCS proteins verified the potency of mefluidide as an inhibitor of plant KCS enzymes. It could be shown that the strength of inhibition varied for different KCS homologues. The Arabidopsis Cer6 protein, which induces a plant growth phenotype similar to mefluidide when knocked out, was one of the most sensitive KCS enzymes (Tresch et al., 2012).rnThe findings of my own work were combined with other publications reporting a successful identification of the MoA and primary target proteins of different compounds or compound classes.rnA revised three-tier approach for the MoA identification of phytoactive compounds is proposed. The approach consists of a 1st level aiming to address compound stability, uniformity of effects in different species, general cytotoxicity and the effect on common processes like transcription and translation. Based on these findings advanced studies can be defined to start the 2nd level of MoA characterisation, either with further phenotypic characterisation, starting a genetic screen or establishing a biochemical screen. At the 3rd level, enzyme assays or protein affinity studies should show the activity of the compound on the hypothesized target and should associate the in vitro effects with the in vivo profile of the compound.