Análise funcional e estrutural da proteína Pub 1 de Saccharomyces cerevisiae

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Análise de domínio para avaliação de tesauros: uma experiência com a cadeia produtiva do calçado no Brasil

Pós-graduação em Ciência da Informação - FFC

Relações teóricas da organização do conhecimento com as abordagens de catalogação de assunto, indexação e análise documental

Considering knowledge organization and representation as a theoretical line used by Information Science to face the subject approach to information, in a dialogical relation with subject cataloguing, indexing and “analyse documentaire”, this article carries out a domain-analysis of Scire journal (1995-2010) in order to identify the scientific production in the mentionned theoretical lines as well as their relationships. Scire constitutes an environment where members of the different paradigms have found an space to relate each other.

El ámbito temático: un análisis de dominio de las conferencias nacionales y regionales de ISKO (Brasil, España y América del Norte)

This article is the result of a domain analysis of the articles published in the congresses of ISKO in Brazil, Spain and North America, aiming at identifying the themes and scientific collaboration characteristics, as an input for future studies on research trends and promoting the growth of the participation in each community. So it was characterized as an exploratory research focused on the analysis domain. The results showed that the Brazilian, North American and Iberian ISKO Chapters have been building a large space of scientific production with some convergent subjects like the epistemological questions, but also considering the regional specific ones. In this vein, the presence of researchers in the three studied academic spaces reveals a concern on establishing dialogical basis in KO research, whose main research institutions are São Paulo State University (UNESP, Brazil), University of Wisconsin Milwaukee (UWM, United States) and University Carlos III de Madrid (UC3M, Spain), which have deeply intensified their collaboration in joint publications.

Estudos de Análise de Cocitação de Autores: uma abordagem teórico-metodológica para a compreensão de um domínio

This piece of research aims at analyzing the absolute and relative co-citation indicators, especially Salton’s Cosine and comparing the contribution of these indicators to the understanding of a domain, applying them to the universe of "Metric Studies" at the BRAPCI base. It also aims at presenting the co-citation network generated from the absolute frequencies and highlighting the groupings of co-cited authors, depending on the relative values, integrating and explaining the information from the two indexes. The domain analysis, by means of its 11 approaches, including “Bibliometric Studies”, focuses on the science characterization and evaluation, in that it allows us to identify and to analyze the conditions under which the scientific knowledge is constructed and socialized. In these studies, the contribution of citation and co-citation analysis is highlighted. Of the total of 147 articles retrieved at BRAPCI base, the authors cited in at least 11 articles, in a total of 38 researchers, were selected. The 38 x 38 symmetric matrix with the absolute frequencies of co-citation and the matrix with the relative values of Salton’s Cosine were generated. The co-citation network with absolute frequency values were constructed, through Ucinet software. Cluster analysis of data with relative values wer performed, using the SPSS software. Significant differences between the absolute and relative indexes, with some high absolute values of co-citation were observed; when considered in relation to the presence of each author, their significance is decreased. As to the generated network, seven groups were determined, in which only one is established for close themes and comes from co-citations in the original sense of the term. Five groups present closeness in absolute and relative indicators. It can be concluded about the importance of the studies of authors' co-citation analysis, which associate the two indexes, absolute and relative, in order to visualize and understand the underlying structures of a scientific domain.

Visibilidade dos pesquisadores no GT7 da ANCIB: um estudo de cocitações

This research aims at analyzing the researchers with major insertion and impact within the GT7 ENANCIB community, through an analysis study of citation and co-citation from 2003 to 2010. We propose to highlight the researchers cited in a greater number of papers, as well as the number of citations received. Also, to describe the co-citation network intending to analyze the interlocution network built by the writers towards the cited ones and calculate the indicators of density and centrality of the network. As for the theoretical-methodological basis, we used the Domain Analysis (D.A.), seen as the reflexion of a discourse community. Among the 11 approaches about D.A, the bibliometric studies stand out. Data from the 124 researches presented in the period of this study showed 1446 cited researches for a total of 2307 citations. From the total number of cited researchers in a greater number of papers, 33 were considered authors of major impact and visibility, being cited in at least 8 papers, thus getting at least 8 citations. The software Ucinet was used to map and visualize the net of interlocution established by the citing papers. As for the results, we could notice that, from the total of 33 researchers, 23 are Brazilian, 20 take part in Post-Graduation Programs and 11 are granted CNPq scholarships of productivity. Furthermore, we highlighted the most cited themes and analyzed the relationship involving the number of citations according to the number of papers in which the researcher was cited and the number of researches cited from each researcher. Regarding the network structure, we could observe that the authors form a single component, indicating that the group of researchers co-cited reveals proximity and theoretical, conceptual and methodological articulations. We concluded that the citing community adopts ordinary theoretical schools; moreover, we might characterize the core of the known researchers as a foundation for the knowledge of the GT7 theme.

Fractal correlation property of heart rate variability in response to the postural change maneuver in healthy women

Background: We evaluated the effects of the PCM on the fractal analysis of the HRV in healthy women Method: We evaluated healthy women between 18 and 30 years old. HRV was analyzed in the time (SDNN, RMSSD, NN50 and pNN50) and frequency (LF, HF and LF/HF ratio) domains as well as short and long-term fractal exponents (alpha-1 and alpha-2) of the detrended fluctuation analysis (DFA). HRV was recorded at rest for ten minutes at seated rest and then the women quickly stood up from a seated position in up to three seconds and remained standing for 15 minutes. HRV was recorded at the following time: rest, 0–5 min, 5–10 min and 10–15 min during standing. Results: We observed decrease (p < 0.05) in the time-domain indices of HRV between seated and 10–15 minutes after the volunteer stood up. The LF (ms2) and HF (ms2) indices were also reduced (p < 0.05) at 10–15 minutes after the volunteer stood up compared to seated while the LF (nu) was increased at 5–10 min and 10–15 min (p < 0.05). The short-term alpha-1 exponent was increased (p < 0.05) at all moments investigated compared to seated. Increase in the properties of short-term fractal correlations of heart rate dynamics accompanied by a decrease in the parasympathetic modulation and global HRV was observed in response to the postural change maneuver. Conclusion: We suggest that fractal analysis of HRV is more sensitive than frequency and time-domain analysis of HRV during the postural change maneuver.

Fitting the frequency-dependent parameters in the Bergeron line model

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Cultural consonance and arterial blood pressure in urban Brazil

In previous research in Brazil, we tested the hypothesis that cultural consonance is associated with arterial blood pressure. Cultural consonance is the degree to which individuals are able to approximate in their own behaviors the prototypes for behavior encoded in shared cultural models. Individuals who had higher cultural consonance in the domains of lifestyle and social support had lower blood pressures. The aim of the current research was to replicate and extend these findings. First, a more extensive cultural domain analysis was carried out, improving the description of cultural models. Second, more sensitive measures of cultural consonance were developed. Third, data were collected in the same community studied previously. The following findings emerged: (a) cultural domain analysis (using a mix of quantitative and qualitative techniques) indicated that cultural models for these domains are widely shared within the community; (b) the associations of cultural consonance in these domains with arterial blood pressure were replicated; and, (c) the pattern of the associations differed slightly from that observed in earlier research. This pattern of associations can be understood in terms of macrosocial influences over the past ten years. The results support the importance of long-term fieldwork in anthropology. (c) 2005 Elsevier Ltd. All rights reserved.

The Relationship between Authors and Main Thematic Categories in the Field of Knowledge Organization: A Bibliometric Approach

This is a study about the relationships between authors and the main thematic categories in the papers published in the last five International ISKO Conferences, held between 2002 and 2010. The aim is to map the domain as ISKO conferences are considered the most representative forum in the field. The published papers are considered to indicate the relationships between authors and themes. The Classification Scheme for Knowledge Organization Error! Bookmark not defined Literature (CSKOL) was used to categorize the papers. The theoretical and methodological foundations of the study can be found in the concept of domain analysis proposed by Hjorland. The analysis of the papers (n=146) led to the identification of the most productive authors, the networks representing the relationships between the authors as also the categories that constitute the primary areas of research.

Tecnologia da informação, discurso e poder: análise de domínio a partir do conceito de exclusão digital na perspectiva da teoria centro-periferia

Pós-graduação em Ciência da Informação - FFC

Produção científica em organização do conhecimento: uma análise de domínio via cocitações de autores

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Representation of transmission lines: comparison of models and parameters distributed discrete parameters

A transmission line is characterized by the fact that its parameters are distributed along its length. This fact makes the voltages and currents along the line to behave like waves and these are described by differential equations. In general, the differential equations mentioned are difficult to solve in the time domain, due to the convolution integral, but in the frequency domain these equations become simpler and their solutions are known. The transmission line can be represented by a cascade of π circuits. This model has the advantage of being developed directly in the time domain, but there is a need to apply numerical integration methods. In this work a comparison of the model that considers the fact that the parameters are distributed (Universal Line Model) and the fact that the parameters considered concentrated along the line (π circuit model) using the trapezoidal integration method, and Simpson's rule Runge-Kutta in a single-phase transmission line length of 100 km subjected to an operation power. © 2003-2012 IEEE.

Identificação de genes candidatos à indução do florescimento em cana-de-açúcar em câmara de fotoperíodo

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Parameters and algorithms to evaluate cardiac mechanics by conductance catheter

This work is structured as follows: In Section 1 we discuss the clinical problem of heart failure. In particular, we present the phenomenon known as ventricular mechanical dyssynchrony: its impact on cardiac function, the therapy for its treatment and the methods for its quantification. Specifically, we describe the conductance catheter and its use for the measurement of dyssynchrony. At the end of the Section 1, we propose a new set of indexes to quantify the dyssynchrony that are studied and validated thereafter. In Section 2 we describe the studies carried out in this work: we report the experimental protocols, we present and discuss the results obtained. Finally, we report the overall conclusions drawn from this work and we try to envisage future works and possible clinical applications of our results. Ancillary studies that were carried out during this work mainly to investigate several aspects of cardiac resynchronization therapy (CRT) are mentioned in Appendix. -------- Ventricular mechanical dyssynchrony plays a regulating role already in normal physiology but is especially important in pathological conditions, such as hypertrophy, ischemia, infarction, or heart failure (Chapter 1,2.). Several prospective randomized controlled trials supported the clinical efficacy and safety of cardiac resynchronization therapy (CRT) in patients with moderate or severe heart failure and ventricular dyssynchrony. CRT resynchronizes ventricular contraction by simultaneous pacing of both left and right ventricle (biventricular pacing) (Chapter 1.). Currently, the conductance catheter method has been used extensively to assess global systolic and diastolic ventricular function and, more recently, the ability of this instrument to pick-up multiple segmental volume signals has been used to quantify mechanical ventricular dyssynchrony. Specifically, novel indexes based on volume signals acquired with the conductance catheter were introduced to quantify dyssynchrony (Chapter 3,4.). Present work was aimed to describe the characteristics of the conductancevolume signals, to investigate the performance of the indexes of ventricular dyssynchrony described in literature and to introduce and validate improved dyssynchrony indexes. Morevoer, using the conductance catheter method and the new indexes, the clinical problem of the ventricular pacing site optimization was addressed and the measurement protocol to adopt for hemodynamic tests on cardiac pacing was investigated. In accordance to the aims of the work, in addition to the classical time-domain parameters, a new set of indexes has been extracted, based on coherent averaging procedure and on spectral and cross-spectral analysis (Chapter 4.). Our analyses were carried out on patients with indications for electrophysiologic study or device implantation (Chapter 5.). For the first time, besides patients with heart failure, indexes of mechanical dyssynchrony based on conductance catheter were extracted and studied in a population of patients with preserved ventricular function, providing information on the normal range of such a kind of values. By performing a frequency domain analysis and by applying an optimized coherent averaging procedure (Chapter 6.a.), we were able to describe some characteristics of the conductance-volume signals (Chapter 6.b.). We unmasked the presence of considerable beat-to-beat variations in dyssynchrony that seemed more frequent in patients with ventricular dysfunction and to play a role in discriminating patients. These non-recurrent mechanical ventricular non-uniformities are probably the expression of the substantial beat-to-beat hemodynamic variations, often associated with heart failure and due to cardiopulmonary interaction and conduction disturbances. We investigated how the coherent averaging procedure may affect or refine the conductance based indexes; in addition, we proposed and tested a new set of indexes which quantify the non-periodic components of the volume signals. Using the new set of indexes we studied the acute effects of the CRT and the right ventricular pacing, in patients with heart failure and patients with preserved ventricular function. In the overall population we observed a correlation between the hemodynamic changes induced by the pacing and the indexes of dyssynchrony, and this may have practical implications for hemodynamic-guided device implantation. The optimal ventricular pacing site for patients with conventional indications for pacing remains controversial. The majority of them do not meet current clinical indications for CRT pacing. Thus, we carried out an analysis to compare the impact of several ventricular pacing sites on global and regional ventricular function and dyssynchrony (Chapter 6.c.). We observed that right ventricular pacing worsens cardiac function in patients with and without ventricular dysfunction unless the pacing site is optimized. CRT preserves left ventricular function in patients with normal ejection fraction and improves function in patients with poor ejection fraction despite no clinical indication for CRT. Moreover, the analysis of the results obtained using new indexes of regional dyssynchrony, suggests that pacing site may influence overall global ventricular function depending on its relative effects on regional function and synchrony. Another clinical problem that has been investigated in this work is the optimal right ventricular lead location for CRT (Chapter 6.d.). Similarly to the previous analysis, using novel parameters describing local synchrony and efficiency, we tested the hypothesis and we demonstrated that biventricular pacing with alternative right ventricular pacing sites produces acute improvement of ventricular systolic function and improves mechanical synchrony when compared to standard right ventricular pacing. Although no specific right ventricular location was shown to be superior during CRT, the right ventricular pacing site that produced the optimal acute hemodynamic response varied between patients. Acute hemodynamic effects of cardiac pacing are conventionally evaluated after stabilization episodes. The applied duration of stabilization periods in most cardiac pacing studies varied considerably. With an ad hoc protocol (Chapter 6.e.) and indexes of mechanical dyssynchrony derived by conductance catheter we demonstrated that the usage of stabilization periods during evaluation of cardiac pacing may mask early changes in systolic and diastolic intra-ventricular dyssynchrony. In fact, at the onset of ventricular pacing, the main dyssynchrony and ventricular performance changes occur within a 10s time span, initiated by the changes in ventricular mechanical dyssynchrony induced by aberrant conduction and followed by a partial or even complete recovery. It was already demonstrated in normal animals that ventricular mechanical dyssynchrony may act as a physiologic modulator of cardiac performance together with heart rate, contractile state, preload and afterload. The present observation, which shows the compensatory mechanism of mechanical dyssynchrony, suggests that ventricular dyssynchrony may be regarded as an intrinsic cardiac property, with baseline dyssynchrony at increased level in heart failure patients. To make available an independent system for cardiac output estimation, in order to confirm the results obtained with conductance volume method, we developed and validated a novel technique to apply the Modelflow method (a method that derives an aortic flow waveform from arterial pressure by simulation of a non-linear three-element aortic input impedance model, Wesseling et al. 1993) to the left ventricular pressure signal, instead of the arterial pressure used in the classical approach (Chapter 7.). The results confirmed that in patients without valve abnormalities, undergoing conductance catheter evaluations, the continuous monitoring of cardiac output using the intra-ventricular pressure signal is reliable. Thus, cardiac output can be monitored quantitatively and continuously with a simple and low-cost method. During this work, additional studies were carried out to investigate several areas of uncertainty of CRT. The results of these studies are briefly presented in Appendix: the long-term survival in patients treated with CRT in clinical practice, the effects of CRT in patients with mild symptoms of heart failure and in very old patients, the limited thoracotomy as a second choice alternative to transvenous implant for CRT delivery, the evolution and prognostic significance of diastolic filling pattern in CRT, the selection of candidates to CRT with echocardiographic criteria and the prediction of response to the therapy.