Assembling a xylanase-lichenase chimera through all-atom molecular dynamics simulations

Multifunctional enzyme engineering can improve enzyme cocktails for emerging biofuel technology. Molecular dynamics through structure-based models (SB) is an effective tool for assessing the tridimensional arrangement of chimeric enzymes as well as for inferring the functional practicability before experimental validation. This study describes the computational design of a bifunctional xylanase-lichenase chimera (XylLich) using the xynA and bglS genes from Bacillus subtilis. In silico analysis of the average solvent accessible surface area (SAS) and the root mean square fluctuation (RMSF) predicted a fully functional chimera, with minor fluctuations and variations along the polypeptide chains. Afterwards, the chimeric enzyme was built by fusing the xynA and bglS genes. XylLich was evaluated through small-angle X-ray scattering (SAXS) experiments, resulting in scattering curves with a very accurate fit to the theoretical protein model. The chimera preserved the biochemical characteristics of the parental enzymes, with the exception of a slight variation in the temperature of operation and the catalytic efficiency (k cat/Km). The absence of substantial shifts in the catalytic mode of operation was also verified. Furthermore, the production of chimeric enzymes could be more profitable than producing a single enzyme separately, based on comparing the recombinant protein production yield and the hydrolytic activity achieved for XylLich with that of the parental enzymes. © 2013 Elsevier B.V. All rights reserved.

Influência da paralisação escalonada da aeração na eficiência do tratamento aeróbio na manipueira em batelada

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Efeito da moagem em moinho de bolas e do tratamento térmico com baixa umidade sobre as características estruturais e físico-químicas dos amidos de mandioca e mandioquinha-salsa

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Avaliação de tratamento de manipueira em biodigestores fase acidogênica e metanogênica

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Diversidade morfológica, genética e química de populações naturais de Anemopaegma arvense (Vell.) Stellf

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Avaliação do potencial alelopático de substâncias isoladas em sementes de araticum (Annona crassiflora)

Este estudo visou identificar substâncias biologicamente ativas e o potencial alelopático de esteroides glicosilados, provenientes das sementes de Annona crassiflora. O isolamento dos esteroides glicosilados foi realizado com a separação dos constituintes químicos do extrato bruto de acetato de etila em coluna cromatográfica, sendo a completa elucidação estrutural por meio de espectroscopia de RMN 1H. Testes de germinação com as espécies Euphorbia heterophylla e Ipomoea grandifolia foram conduzidos em câmaras tipo BOD a 25ºC e fotoperíodo de 12 horas, monitorados durante 10 dias com avaliação diária, nas concentrações de 0, 20, 40, 80 e 100 mg L^-1 dos materiais isolados. Utilizando as mesmas concentrações, os experimentos de desenvolvimento de radícula e hipocótilo foram mantidos em câmara de germinação a 25ºC e fotoperíodo de 24 horas, com avaliação no décimo dia. Após o extrato de acetato de etila ser submetido ao fracionamento, verificou-se a presença de sinais característicos de fitoesteróis no espectro do RMN ¹H, resultando em uma mistura de estigmasterol glicosilado e sitosterol glicosilado. Os resultados indicam que as substâncias estigmasterol e sitosterol não proporcionaram inibição na germinação e no índice de velocidade de germinação (IVG) de E. heterophylla e I. grandifolia. Por outro lado, estigmasterol e sitosterol interferiram no desenvolvimento de radícula e hipocótilo de E. heterophylla.

Estudo químico de Zollernia ilicifolia (Fabaceae), Wilbrandia ebracteata (Cucurbitaceae) e Caesalpinia ferrea (Caesalpiniaceae)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Phenolic compounds and antioxidant, antimicrobial and antimycobacterial activities of Serjania erecta Radlk. (Sapindaceae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Flavones from Erythrina falcata are modulators of fear memory

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Estudo do potencial enzimático hidrolítico e oxidativo do microorganismo Myceliophthora thermophila M.7.7

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Antiproliferative activity of cardenolide glycosides from Asclepias subulata

Asclepias subulata Decne. is a shrub occurring in Sonora-Arizona desert (Mexico-USA). The ethnic groups, Seris and Pimas, use this plant for the treatment of sore eyes, gastrointestinal disorders and cancer. To isolate the compounds responsible for antiproliferative activity of the methanol extract of A. subulata. A bioguided fractionation of methanol extract of A. subulata was performed using MTT assay to measure the antiproliferative activity of different compounds on three human cancer cell lines (A549, LS 180 and PC-3), one murine cancer cell line (RAW 264.7) and one human normal cell line (ARPE-19). The methanol extract was partitioned with hexane, ethyl acetate and ethanol. The active fractions, ethanol and residual, were fractioned by silica-column chromatography and active sub-fractions were separated using HPLC. The chemical structures of isolated compounds were elucidated with different chemical and spectroscopic methods. A new cardenolide glycoside, 12, 16-dihydroxycalotropin, and three known, calotropin, corotoxigenin 3-O-glucopyranoside and desglucouzarin, were isolated of active sub-fractions. All isolated compounds showed a strong antiproliferative activity in human cancer cells. Calotropin was the more active with IC50 values of 0.0013, 0.06 and 0.41 µM on A549, LS 180 and PC-3 cell lines, respectively; while 12, 16-dihydroxycalotropin reached values of 2.48, 5.62 and 11.70 µM, on the same cells; corotoxigenin 3-O-glucopyranoside had IC50 of 2.64, 3.15 and 6.62 µM and desglucouzarin showed values of 0.90, 6.57 and 6.62, µM. Doxorubicin, positive control, showed IC50 values of 1.78, 6.99 and 3.18 µM, respectively. The isolated compounds had a weak effect on murine cancer cells and human normal cells, exhibiting selectivity to human cancer cells. In this study, we found that 12, 16-dihydroxicalotropin, calotropin, corotoxigenin 3-O-glucopyranoside and desglucouzarin are responsible of antiproliferative properties of A. subulata, and that these compounds are highly selective to human cancer cells. Further studies are needed in order to establish the action mechanisms of the isolated compounds.

Isoflavones supplementation of a probiotic soy product: effects on quality characteristics and isoflavones profile

The aim of the present study was to investigate the effect of isofl avones supplementation of a fermented soy product on its sensory acceptance, physicochemical properties and probiotic cell viable count. Additionally we also investigated the ability of the mixed starter cultures (Enterococcus faecium CRL 183 and Lactobacillus helveticus 416) to modify the isofl avones profi le of soy product during the fermentation process. Three products were analysed: soy product fermented with E. faecium CRL 183 and L. helveticus 416, isofl avonessupplemented soy product (fermented with E. faecium CRL 183 and L. helveticus 416; 50mg/100g, Isofl avin®, Galena, Brazil) and unfermented soy product. A panel of judges evaluated the acceptability of the samples on a nine point structured hedonic scale. The chemical composition namely fat, protein, ash and total carbohydrate contents, pH, enumeration of viable Lactobacillus spp. and Enterococcus spp. and quantifi cation of isofl avones using HPLC were investigated. All determinations were conducted after 7 days storage at 10°C. The sensorial acceptance was reduced in the isofl avones-supplemented soy product, but this effect was not signifi cant compared to the sample without isofl avones addition. Chemical composition did not differ (p<0.05) among the samples. Cell viable counts were reduced and total fermentation time was longer in the isofl avonessupplemented soy product, suggesting that the isofl avone addition could inhibit the starter cultures. However, all the products may be considered probiotic since they exhibited lactic acid bacterial populations varying from 2.3 x 109 up to 1.22 x 1010 CFU/mL. Fermentation of soymilk did not change the isofl avones profi le. In conclusion, it was possible to obtain a fermented soy product containing a high isofl avones concentration, adequate sensory and chemical characteristics and lactic acid bacterial viability suffi ciently high to characterize the product as a probiotic. The mixed starter culture was not able to convert the glycoside isofl avones into aglycone or produce equol during the fermented soy product processing.

Purificação da dextranasacarase de L. mesenteroides FT045B, produção de dextrana de massa molar média controlada, produção de ácido ascórbico α-glicosídeo e do composto bromo-dextrana

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Prospecção de genes na microbiota do rúmen bovino com propriedades degradadoras da biomassa vegetal

Pós-graduação em Microbiologia Agropecuária - FCAV

COMMENSAL RODENT CONTROL

SUMMARY: Federal Urban Rat Control Program grants were awarded to cities in different areas of the United States. Severe problems of rat infestations have been detected in many of the cities by the Environmental Health Service. Approximately 20% of 3.8 million people in the project areas were occupying homes infested with rats. Control operations are now in effect in all cities, and the living conditions of the people have been substantially improved. An increase in interest in rodent control also is evident in countries outside of the United States. The Technical Development Laboratories of the National Communicable Disease Center are participating in the World Health Organization program of research on new rodenticides. The evaluation program involves five steps which carry a candidate toxi¬cant from laboratory phase through field testing. Acceptability and suitable concentrations of both acute and accumulative rodenticides are determined. Observations are made on the hazard of the compound to pets and to other nontarget vertebrates. Laboratory and field studies have been completed on a new, promising stabilized scilliroside glycoside which has given excellent control of the Norway rat in 16 out of 19 premises. Another new coded compound has shown a unique specificity for roof rats as compared to Norway rats. Although anticoagulant resistant rat populations have occurred in several countries in Europe, as yet no evidence has been noted of such resistance in rats in the United States.