BSRN Toolbox V2.0 - a tool to create quality checked output files from BSRN datasets and station-to-archive files

The BSRN Toolbox is a software package supplied by the WRMC and is freely available to all station scientists and data users. The main features of the package include a download manager for Station- to-Archive files, a tool to convert files into human readable TAB-separated ASCII-tables (similar to those output by the PANGAEA database), and a tool to check data sets for violations of the "BSRN Global Network recommended QC tests, V2.0" quality criteria. The latter tool creates quality codes, one per measured value, indicating if the data are "physically possible," "extremely rare," or if "intercomparison limits are exceeded." In addition, auxiliary data such as solar zenith angle or global calculated from diffuse and direct can be output. All output from the QC tool can be visualized using PanPlot (doi:10.1594/PANGAEA.816201).

Hardware timestamping for image acquisition system based on FlexRIO and IEEE 1588 v2 Standard

Current fusion devices consist of multiple diagnostics and hundreds or even thousands of signals. This situation forces on multiple occasions to use distributed data acquisition systems as the best approach. In this type of distributed systems, one of the most important issues is the synchronization between signals, so that it is possible to have a temporal correlation as accurate as possible between the acquired samples of all channels. In last decades, many fusion devices use different types of video cameras to provide inside views of the vessel during operations and to monitor plasma behavior. The synchronization between each video frame and the rest of the different signals acquired from any other diagnostics is essential in order to know correctly the plasma evolution, since it is possible to analyze jointly all the information having accurate knowledge of their temporal correlation. The developed system described in this paper allows timestamping image frames in a real-time acquisition and processing system using 1588 clock distribution. The system has been implemented using FPGA based devices together with a 1588 synchronized timing card (see Fig.1). The solution is based on a previous system [1] that allows image acquisition and real-time image processing based on PXIe technology. This architecture is fully compatible with the ITER Fast Controllers [2] and offers integration with EPICS to control and monitor the entire system. However, this set-up is not able to timestamp the frames acquired since the frame grabber module does not present any type of timing input (IRIG-B, GPS, PTP). To solve this lack, an IEEE1588 PXI timing device its used to provide an accurate way to synchronize distributed data acquisition systems using the Precision Time Protocol (PTP) IEEE 1588 2008 standard. This local timing device can be connected to a master clock device for global synchronization. The timing device has a buffer timestamp for each PXI trigger line and requires tha- a software application assigns each frame the corresponding timestamp. The previous action is critical and cannot be achieved if the frame rate is high. To solve this problem, it has been designed a solution that distributes the clock from the IEEE 1588 timing card to all FlexRIO devices [3]. This solution uses two PXI trigger lines that provide the capacity to assign timestamps to every frame acquired and register events by hardware in a deterministic way. The system provides a solution for timestamping frames to synchronize them with the rest of the different signals.

PCCMuTe v2.2: una herramienta para medir el consumo de energía en sistemas empotrados

Este Proyecto Fin de Grado (PFG) recoge el trabajo de depuración realizado sobre el prototipo PCCMuTe v2.2, un sistema empotrado que dispone de la instrumentación necesaria para medir el consumo de potencia/energía en cada uno de sus dominios de tensión, y posteriormente digitalizar y enviar los resultados al procesador que se encuentra en su interior. Su uso permite la obtención de información en tiempo real sobre el consumo del hardware de la placa, en especial del procesador, pudiendo relacionar la potencia consumida con el software ejecutado. El proyecto está orientado a medir el consumo de energía derivado de la decodificación de vídeo. El software utilizado para controlar el hardware se basa en Linux. En este proyecto se distinguen principalmente dos actividades, depuración hardware y depuración software. Los resultados muestran avances en la depuración hardware hasta obtener un prototipo en completo funcionamiento. Los avances en el apartado del software habilitan las comunicaciones SPI, necesarias para la transmisión de los resultados de consumo al procesador. En la fase final de este PFG se hace uso de una aplicación previamente desarrollada por miembros del GDEM con la que se obtienen los primeros datos de consumo, pero por falta de tiempo estos resultados no pueden ser verificados. Por la misma razón no ha sido posible diseñar y codificar una nueva aplicación que mejore la forma en la que se obtienen esos datos. ABSTRACT. This bachelor final project includes the debugging work done on the prototype PCCMuTe v2.2, an embedded system with the necessary instrumentation to measure the power/ energy consumption in each of its voltage domains, scan and send the results to its processor. The purpose of this device is to obtain real-time information about the hardware power consumption, especially from the processor, being able to relate the power consumed with the software executed. The project aims to measure the energy consumption of video decoding. The software used to control the hardware is based on Linux. In this project there are two main activities: hardware and software debugging. The results show advances in hardware debugging, and finally a fully functioning prototype is obtained. Advances in software debugging enable SPI communications, used to transmit the consumption data to the processor. In the last part of this final bachelor project an application previously coded by other members of the GDEM is used to obtain the first data. The results can not finally be verified because of the lack of time. For the same reason it is not possible to design and code a new application that improves the way the data is obtained.

The ability of HIV type 1 to use CCR-3 as a coreceptor is controlled by envelope V1/V2 sequences acting in conjunction with a CCR-5 tropic V3 loop

Although infection by primary HIV type 1 (HIV-1) isolates normally requires the functional interaction of the viral envelope protein with both CD4 and the CCR-5 coreceptor, a subset of such isolates also are able to use the distinct CCR-3 receptor. By analyzing the ability of a series of wild-type and chimeric HIV-1 envelope proteins to mediate CCR-3-dependent infection, we have determined that CCR-3 tropism maps to the V1 and V2 variable region of envelope. Although substitution of the V1/V2 region of a CCR-3 tropic envelope into the context of a CCR-5 tropic envelope is both necessary and sufficient to confer CCR-3 tropism, this same substitution has no phenotypic effect when inserted into a CXCR-4 tropic HIV-1 envelope context. However, this latter chimera acquires both CCR-3 and CCR-5 tropism when a CCR-5 tropic V3 loop sequence also is introduced. These data demonstrate that the V1/2 region of envelope can, like the V3 loop region, encode a particular coreceptor requirement and suggest that a functional envelope:CCR-3 interaction may depend on the cooperative interaction of CCR-3 with both the V1/V2 and the V3 region of envelope.