Estimates of electronic coupling for excess electron transfer in DNA

Electronic coupling Vda is one of the key parameters that determine the rate of charge transfer through DNA. While there have been several computational studies of Vda for hole transfer, estimates of electronic couplings for excess electron transfer (ET) in DNA remain unavailable. In the paper, an efficient strategy is established for calculating the ET matrix elements between base pairs in a π stack. Two approaches are considered. First, we employ the diabatic-state (DS) method in which donor and acceptor are represented with radical anions of the canonical base pairs adenine-thymine (AT) and guanine-cytosine (GC). In this approach, similar values of Vda are obtained with the standard 6-31 G* and extended 6-31++ G* basis sets. Second, the electronic couplings are derived from lowest unoccupied molecular orbitals (LUMOs) of neutral systems by using the generalized Mulliken-Hush or fragment charge methods. Because the radical-anion states of AT and GC are well reproduced by LUMOs of the neutral base pairs calculated without diffuse functions, the estimated values of Vda are in good agreement with the couplings obtained for radical-anion states using the DS method. However, when the calculation of a neutral stack is carried out with diffuse functions, LUMOs of the system exhibit the dipole-bound character and cannot be used for estimating electronic couplings. Our calculations suggest that the ET matrix elements Vda for models containing intrastrand thymine and cytosine bases are essentially larger than the couplings in complexes with interstrand pyrimidine bases. The matrix elements for excess electron transfer are found to be considerably smaller than the corresponding values for hole transfer and to be very responsive to structural changes in a DNA stack

The influence of G protein subtype on agonist action at D-2 dopamine receptors

In previous studies, we have shown that agonists influence the ability of D-2 dopamine receptors to couple to G proteins and here we extend this work. The human D-2Short dopamine receptor and a natural polymorphism of this D-2Short(Ser(311)Cys), have been studied by co-expressing the receptors in insect cells with Gbeta(1)gamma(2) and either Galpha(o), Galpha(i1), Galpha(i2) or Galpha(i3) G protein subunits. These preparations have been used to study the G protein coupling profiles of the two receptors and the influence of agonists. Receptor/G protein coupling was analysed in dopamine/[H-3]spiperone competition binding experiments and through stimulation of [S-35]GTPgammaS binding. Although the Ser(311)Cys polymorphism itself had no appreciable effect on the G protein coupling specificity of the D-2 receptor, agonist stimulation of [S-35]GTPgammaS binding, revealed that both dopamine and (+)-3PPP showed a clear preference for Galpha(o) compared to the Galpha(i) subtypes, but quinpirole did not. These results indicate that agonists are able to stabilise different receptor conformations with different abilities to couple to G proteins. (C) 2004 Elsevier Ltd. All rights reserved.

Programmable data acquisition system for research measurements from meteorological radiosondes

A programmable data acquisition system to allow novel use of meteorological radiosondes for atmospheric science measurements is described. In its basic form it supports four analogue inputs at 16 bit resolution, and up to two further inputs at lower resolution configurable instead for digital instruments. It also provides multiple instrument power supplies (+8V, +16V, +5V and -8V) from the 9V radiosonde battery. During a balloon flight encountering air temperatures from +17°C to -66°C, the worst case voltage drift in the 5V unipolar digitisation circuitry was 20mV. The system liberates a new range of low cost atmospheric research measurements, by utilising radiosondes routinely launched internationally for weather forecasting purposes. No additional receiving equipment is required. Comparisons between the specially instrumented and standard meteorological radiosondes show negligible effect of the additional instrumentation on the standard meteorological data.

Natural convection in domed porous enclosures : non-darcian flow

The natural-convection flow and associated heat transfer in a fluid-saturated porous medium have been investigated using the generalized porous medium approach for a dome-shaped enclosure. Many new features have been predicted with the connective heat transfer and the shape of the top dome cover. The solutions are obtained for a wide range of Darcy and Rayleigh numbers for different offsets and eccentricities of the top dome covers. The detailed parametric study reveals that there is a significant change in heat transfer rate when the offset is between 0.2 and 0.4. Different shapes of conic section, such as circular, elliptical, parabolic, and hyperbolic are used for the top dome cover, and their effects on natural convection and heat transfer rates are studied.

Doença infecciosa bursal: avaliação da patogenicidade de vacinas comercializadas no Brasil em aves livres de patógenos específicos.

A doença infecciosa bursal ( DIB ) é uma enfermidade viral, que acomete galinhas provocando imunodepressão sendo, economicamente, importante para a indústria avícola. O controle da DIB é realizado através de diferentes vacinas assim como programas de vacinação. No presente trabalho, a patogenicidade de três vacinas intermediárias ( I1, I2 e I3 ), duas intermediárias mais patogênicas ( IP1, IP2 ) e três vacinas contendo vírus forte ( F1, F2 e F3 ) foi avaliada. Aves vacinadas com IP1, IP2, F1, F2 e F3 apresentaram tamanho da bolsa de Fabrício, significativamente, menor em relação ao grupo controle e aos animais vacinados com I1, I2 e I3. Por outro lado, a vacina I3 produziu título de anticorpos semelhante ao grupo controle diferindo de todas as demais vacinas. Porém I1 e I2 induziram títulos de anticorpos maiores que o grupo controle, sendo que I1 promoveu a formação de título de anticorpos semelhante à IP1, IP2, F1, F2 e F3. Os escores de lesão histopatológica mostraram que I1, I2 e I3 induziram graus similares de lesão da bolsa, sendo que I2 e I3 não diferiram do grupo controle, enquanto I1 apresentou diferença. As vacinas intermediárias mais patogênicas, assim como as vacinas“fortes“ promoveram escores de lesão, significativamente, maiores que as demais vacinas testadas. Esses resultados sugerem que as vacinas intermediárias mais patogênicas e as vacinas “fortes“ são capazes de causar severos danos na bolsa de Fabrício. Também foi possível inferir que a bursometria pode ser inadequada para a avaliação vacinal, porém pode ser utilizada na escolha da vacina para programas de vacinação. Além disso, observou-se que as vacinas “fortes“ induziram a formação de títulos de anticorpos mais altos que as demais vacinas, porém algumas vacinas intermediárias são capazes de promover títulos semelhantes.

Helicobacter pylori and EBV in gastric carcinomas: Methylation status and microsatellite instability

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Interaction of the nonionic surfactant C12E8 with high molar mass poly(ethylene oxide) studied by dynamic light scattering and fluorescence quenching methods

Dynamic light scattering has been used to investigate ternary aqueous solutions of n-dodecyl octaoxyethylene glycol monoetber (C12E8) with high molar mass poly(ethylene oxide) (PEO). The measurements were made at 20 °C, always below the cloud point temperature (Tc) of the mixed solutions. The relaxation time distributions are bimodal at higher PEO and surfactant concentrations, owing to the preacute of free surfactant micelles, which coexist with the slower component, representing the polymer coil/micellar cluster comptex. As the surfactant concentration is increased, the apparent hydrodynamic radius (RH) of the coil becomes progressively larger. It is suggested that the complex structure consists of clusters of micelles sited within the polymer coil, as previously concluded for the PEO-C12E8-water system. However. C12E8 interacts less strongly than C12E8 with PEO; at low concentrations of surfactant the complex does not contribute significantly to the total scattered intensity. The perturbation of the PEO coil radius with C12E8 is also smaller than that in the C12E8 system. The addition of PEO strongly decreases the clouding temperature of the system, as previously observed for C12E8/PEO mixtures in solution Addition of PEO up to 0.2% to C12E8 (10 wt %) solutions doss not alter the aggregation number (Nagg) of the micelles probably because the surfactant monomers are equally partitioned as bound and unbound micelles. The critical micelle concentration (cmc), obtained from the I1/I3 ratio (a measure of the dependence of the vibronic band intensities on the pyrene probe environment), does not change when PEO is added, suggesting that for neutral polymer/surfactant systems the trends in Nagg and the cmc do not unambiguously reflect the strength of interaction.

Estudio de la adición de K+ y LiNbO3 en las propiedades finales del relaxor PMN procesado por mezcla de polvos

PMN ceramic relaxor has been investigated by several researchers and many aspects of this material, like powder morphology, phase decomposition, weight loss during sintering process, densification, between others, still are investigated. PMN powder preparation has been shown more efficient when synthesized by columbite route, however lead addition stage for the PMN powder synthesis remains problematical. Therefore, this work proposes a new association of methodologies, using columbite route and the hydroxide precipitation method. Through use of the powder mixture technique, which permitted to obtain good green and sintered densities, was possible to observe K+ y Li + dopants reduce weight loss in sintering process and change significantly the dielectric properties. Addition of LiNbO3 seeds in conformation stage, which react in a distinct way as a function of the particle size, promotes the formation of differenced grains in the ceramic bulk. Consequently, very different dielectrics properties from conventional PMN ceramic were obtained.

Substratos e níveis de irrigação na formação de porta-enxerto utilizando limão-cravo

Pós-graduação em Agronomia (Ciência do Solo) - FCAV

Estudo químico e atividade biológica de Garcinia xanthochymus (Clusiaceae)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Análise molecular e morfológica de exemplares de Trichomycterus valenciennes, 1832 da Chapada dos Guimarães (Bacia do Paraguai) e ensaio sobre o complexo de espécies Trichomycterus brasiliensis Lutken, 1874

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Interleucinas e perfil quimiometabólico músculo-esquelético de ratos com o membro posterior imobilizado e submetidos à estimulação elétrica neuromuscular

Pós-graduação em Ciências da Motricidade - IBRC

Síntese, caracterização e estudos em solução de terpolímeros antififílicos termo-sensíveis ao pH: uma perspectiva para obtenção de sistemas transportadores de fármacos

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)