Eficiência energética e econômica da produção de leite bovino em explorações familiares no Município de Pardinho,região de Botucatu-SP

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Avaliação in vitro da dentina remanescente após remoção químico-mecânica do tecido cariado em dentes decíduos

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Sazonalidade no balanço de energia em áreas de cultivo de soja na Amazônia

Neste trabalho, avaliou-se o balanço de energia na cultura soja (Glycine max (L.) Merrill), variedade Tracajá, durante a safra e entressafra, em uma área de avanço de fronteira agrícola na Amazônia, por meio do método da razão de Bowen. Durante quase todo o ciclo da cultura, maior parte da energia foi consumida na forma de calor latente, principalmente durante as fases de florescimento e frutificação. Tal característica esteve relacionada à elevada condutância estomática foliar da soja e à disponibilidade de água na região. Próximo ao fim do ciclo ocorreu uma inversão na partição de energia entre os componentes H e LE, quando maior parte da energia foi usada no aquecimento do ar (79% do saldo de radiação). Durante a entressafra observou-se a redução de 75% no fluxo de calor latente e aumento considerável de 180% no fluxo de calor sensível comparado ao encontrada durante o ciclo.

Towards the construction of a validated numerical system to study the mesoscale dynamics of the North East Atlantic (2003-2006)

Máster en Oceanografía

Novel techniques for the remote sensing of photosynthetic processes

Remote sensing (RS) techniques have evolved into an important instrument to investigate forest function. New methods based on the remote detection of leaf biochemistry and photosynthesis are being developed and applied in pilot studies from airborne and satellite platforms (PRI, solar-induced fluorescence; N and chlorophyll content). Non-destructive monitoring methods, a direct application of RS studies, are also proving increasingly attractive for the determination of stress conditions or nutrient deficiencies not only in research but also in agronomy, horticulture and urban forestry (proximal RS). In this work I will focus on some novel techniques recently developed for the estimation of photochemistry and photosynthetic rates based (i) on the proximal measurement of steady-state chlorophyll fluorescence yield, or (ii) the remote sensing of changes in hyperspectral leaf reflectance, associated to xanthophyll de-epoxydation and energy partitioning, which is closely coupled to leaf photochemistry and photosynthesis. I will also present and describe a mathematical model of leaf steady-state fluorescence and photosynthesis recently developed in our group. Two different species were used in the experiments: Arbutus unedo, a schlerophyllous Mediterranean species, and Populus euroamericana, a broad leaf deciduous tree widely used in plantation forestry. Results show that ambient fluorescence could provide a useful tool for testing photosynthetic processes from a distance. These results confirm also the photosynthetic reflectance index (PRI) as an efficient remote sensing reflectance index estimating short-term changes in photochemical efficiency as well as long-term changes in leaf biochemistry. The study also demonstrated that RS techniques could provide a fast and reliable method to estimate photosynthetic pigment content and total nitrogen, beside assessing the state of photochemical process in our plants’ leaves in the field. This could have important practical applications for the management of plant cultivation systems, for the estimation of the nutrient requirements of our plants for optimal growth.

Analisi della rete di teleriscaldamento di Corticella in presenza di utenze attive

Oggetto di questa tesi è lo studio di una rete di teleriscaldamento (TLR) preesistente, la rete di Corticella (Bo) ipotizzando la presenza di sottostazioni di scambio termico attive. Inizialmente sono state presentate le sottostazioni di scambio termico sia tradizionali che attive. Nelle tradizionali ci si è soffermato sul tipo di regolazione che può avvenire. Per quanto riguarda le sottostazioni di scambio termico attive son stati esaminati i 4 layout che permettono uno scambio termico bidirezionale di energia termica. E’ stato presentato il software IHENA (intelligent Heat Energy Network Analysis) creato dal dipartimento di ingegneria industriale, che ha permesso di effettuare le simulazioni sulla rete analizzata. Viene mostrato l’algoritmo di Todini-Pilati generalizzato dall’utilizzo delle equazioni di Darcy-Weisbach su cui si basa il motore di calcolo. Inoltre vengono presentati i vari input che è necessario inserire per ottenere il calcolo della rete. Dopo nozioni di base relative al teleriscaldamento attivo e la presentazione del software utilizzato si è passati alla vera e propria analisi della rete di teleriscaldamento. Sono state effettuate varie simulazioni per vedere l’andamento della rete di Corticella sia considerandola passiva (come nella realtà) che ipotizzandola attiva tramite l’inserimento di sottostazioni di scambio termico ative. Le analisi condotte riguardano i seguenti punti. a) E’ stata presentata la rete di Corticella cosi come è andando a studiare quindi il caso base. b) Sono state svolte delle analisi per vedere come si comportava la rete nel caso in cui venivano variati dei parametri operativi come i carichi termici richiesti dalle utenze. c) Sono stati valutati i percorsi più critici. d) Si è condotta un analisi sulla regolazione al variare delle temperature esterne. Dopo l'analisi del caso base sono state introdotte delle sottostazioni di scambio termico attive, prima solo una, e poi varie lungo determinati percorsi. Le valutazioni effettuate mettevano in primo piano gli andamenti della temperatura nei percorsi, la potenza termica generata dalla sorgente, la temperatura di ritorno in centrale e se si verificano delle problematiche sugli scambiatori di calore. In queste simulazioni sono stati valutati tutti e quattro gli schemi utilizzabili. Infine è stata effettuata un analisi comparativa tra le varie soluzioni studiate per poter mettere a confronto i casi. In particolare anche qui si sono voluti confrontare i valori di potenza spesa per il pompaggio, temperatura di ritorno in centrale e potenza termica offerta dalla sorgente.

Predicting the "usefulness" of 5-ALA-derived tumor fluorescence for fluorescence-guided resections in pediatric brain tumors: a European survey.

BACKGROUND Five-aminolevulinic acid (Gliolan, medac, Wedel, Germany, 5-ALA) is approved for fluorescence-guided resections of adult malignant gliomas. Case reports indicate that 5-ALA can be used for children, yet no prospective study has been conducted as of yet. As a basis for a study, we conducted a survey among certified European Gliolan users to collect data on their experiences with children. METHODS Information on patient characteristics, MRI characteristics of tumors, histology, fluorescence qualities, and outcomes were requested. Surgeons were further asked to indicate whether fluorescence was "useful", i.e., leading to changes in surgical strategy or identification of residual tumor. Recursive partitioning analysis (RPA) was used for defining cohorts with high or low likelihoods for useful fluorescence. RESULTS Data on 78 patients <18 years of age were submitted by 20 centers. Fluorescence was found useful in 12 of 14 glioblastomas (85 %), four of five anaplastic astrocytomas (60 %), and eight of ten ependymomas grades II and III (80 %). Fluorescence was found inconsistently useful in PNETs (three of seven; 43 %), gangliogliomas (two of five; 40 %), medulloblastomas (two of eight, 25 %) and pilocytic astrocytomas (two of 13; 15 %). RPA of pre-operative factors showed tumors with supratentorial location, strong contrast enhancement and first operation to have a likelihood of useful fluorescence of 64.3 %, as opposed to infratentorial tumors with first surgery (23.1 %). CONCLUSIONS Our survey demonstrates 5-ALA as being used in pediatric brain tumors. 5-ALA may be especially useful for contrast-enhancing supratentorial tumors. These data indicate controlled studies to be necessary and also provide a basis for planning such a study.

Deficiency of ECHS1 causes mitochondrial encephalopathy with cardiac involvement.

OBJECTIVE Short-chain enoyl-CoA hydratase (ECHS1) is a multifunctional mitochondrial matrix enzyme that is involved in the oxidation of fatty acids and essential amino acids such as valine. Here, we describe the broad phenotypic spectrum and pathobiochemistry of individuals with autosomal-recessive ECHS1 deficiency. METHODS Using exome sequencing, we identified ten unrelated individuals carrying compound heterozygous or homozygous mutations in ECHS1. Functional investigations in patient-derived fibroblast cell lines included immunoblotting, enzyme activity measurement, and a palmitate loading assay. RESULTS Patients showed a heterogeneous phenotype with disease onset in the first year of life and course ranging from neonatal death to survival into adulthood. The most prominent clinical features were encephalopathy (10/10), deafness (9/9), epilepsy (6/9), optic atrophy (6/10), and cardiomyopathy (4/10). Serum lactate was elevated and brain magnetic resonance imaging showed white matter changes or a Leigh-like pattern resembling disorders of mitochondrial energy metabolism. Analysis of patients' fibroblast cell lines (6/10) provided further evidence for the pathogenicity of the respective mutations by showing reduced ECHS1 protein levels and reduced 2-enoyl-CoA hydratase activity. While serum acylcarnitine profiles were largely normal, in vitro palmitate loading of patient fibroblasts revealed increased butyrylcarnitine, unmasking the functional defect in mitochondrial β-oxidation of short-chain fatty acids. Urinary excretion of 2-methyl-2,3-dihydroxybutyrate - a potential derivative of acryloyl-CoA in the valine catabolic pathway - was significantly increased, indicating impaired valine oxidation. INTERPRETATION In conclusion, we define the phenotypic spectrum of a new syndrome caused by ECHS1 deficiency. We speculate that both the β-oxidation defect and the block in l-valine metabolism, with accumulation of toxic methacrylyl-CoA and acryloyl-CoA, contribute to the disorder that may be amenable to metabolic treatment approaches.

Factors associated with HPV16 status and survival among patients with squamous cell carcinoma of the oropharynx

Background: Squamous cell carcinoma of the oropharynx (SCCOP) is characterized by local tumor aggressiveness, high recurrence rates, a high incidence of second primary tumors, and medical comorbidities. Significant trends in demographic and clinical characteristics as well as survival among SCCOP patients have been observed over time, likely owing to the changing etiology of the disease. Human papillomavirus type 16 (HPV16) infection is associated with a significant proportion of these cancers. Biomarkers that may aid in identifying patients that are at higher risk of recurrence and death are important so that these patients may be followed more closely to improve their quality of life. ^ Study population and methods: The retrospective review (Specific Aim 2) included 3891 newly diagnosed, previously untreated patients presenting to our institution between 1955 and 2004. A total of 2299 patients treated at our institution were included in survival and recursive partitioning analysis. The prospective cohort study (Specific Aim 3) included 266 patients presenting to our institution between January 2006 and September 2009. ^ Results: The results from the retrospective review showed that over time, patients presented at younger ages and were more likely to have base of tongue/tonsil tumors and to be never/former smokers and moreover survival improved significantly over time. In survival and recursive partitioning analyses, the TNM staging system was efficient in prognosticating patients prior to 1995. However, in the recent decade, the TNM staging system was completely inadequate. The factors having the greatest positive effect on overall survival since 1995 were those common to HPV-associated SCCOP. The results from the prospective cohort study indicate that patients with high nodal stage and those with late stage disease have increased levels of pretreatment serum HPV DNA. ^ Conclusions: We saw a distinct improvement in survival among SCCOP patients over the past 50 years at our institution. The main factors contributing to this were changes in clinical characteristics, in particular surrogates for HPV status. The current TNM staging system for SCCOP is inadequate and incorporation of HPV status (and perhaps smoking status) is encouraged. Furthermore, although pretreatment circulating levels of HPV DNA was associated with higher N category and overall disease stage, it has limited utility as a marker for recurrence among SCCOP patients.^

Geochemistry of bulk samples and various minerals of sediment core CRP-1 from the Ross Sea, Antarctica

Thirty-nine medium and fine grained sandstones from between 19,26 and 147,23 mbsf in the Cape Roberts-l core (CRP-1) were analysed for 10 major and 16 trace elements. Using whole-lock compositions, 9 samples were selected for analyses of mineral and glass grains by energy dispersive electron microscope. Laser-Ablation Mass-Spectrometry was used to determine rare earth elements and 14 additional trace elements in glass shards, pyroxenes and feldspars in order to examine their contribution to the bulk rock chemistry. Geochemical data reveal the major contribution played by the Granite Harbour Intrusives to the whole rock composition, even if a significant input is supplied by McMurdo volcanics and Ferrar dolerite pyroxenes McMurdo volcanics were studied in detail; they appeal to derive from a variety of litologies, and a dominant role of wind transpoitation from exposures of volcanic rocks may be inferred from the contemporary occurrence of different compositions at all depths. Only at 116.55 mbsf was a thin layer of tephra found, linked to an explosive eruption McMurdo volcanic rocks exhibit larger abundances at depths above 62 mbsf, in correspondence with the onset of volcanic activity in the McMurdo Sound area. From 62 mbsf to the bottom of the core, McMurdo volcanics are less abundant and probably issued from some centres in the McMurdo Sound region. However, available data do not allow the exclusion of wind transport from some eruptive centres active in north Victoria Land at the beginning of the Miocene Epoch.

Investigation of diagenesis in sediment core CRP-1 from the Ross Sea, Antarctica

A diagenetic study was carried out on the cored Miocene section in CRP-1 by thin-section, X-ray diffraction, scanning electron microscope, electron microprobe and stable isotopic analysis. Carbonate (calcite, siderite) microconcretions occur locally within intergranular pores and open fractures, and some sands are cemented by microcrystalline calcite. Calcite cement at 115.12 mbsf (metres below sea floor) and possibly microconcretionary calcite at 44.62 mbsf record infiltration of meteoric waters into the section, consistent with sequence stratigraphic evidence for multiple glacial advances over the CRP-1 drillsite. Diagenetic carbonates incorporated carbon derived from both organic matter and marine carbonate. Carbon isotope data are consistent with microconcretion formation at shallow depths. Sandstones are poorly compacted and, despite containing a large component of chemically unstable grains, are virtually unaltered. Preservation of the chemically unstable grain component reflects the cold climate depositional setting and shallow maximum burial depths.

Geochemistry of minerals in CRP sediment cores from the Ross Sea, Antarctica

Sixty-four volcanic chists, sandstones and tephras between 5.95 and 618.19 meters below sea floor (mbsf) in the Cape Roberts Project cores 2 and 2A cores (CRP-2/2A) were examined for Cenozoic and Mesozoic volcanic components, using optical and Scanning Electron Microscopy. Minerals and glass shards in a selection of samples were analysed by electron microprobe fined with an EDAX detector. Laser-Ablation ICP-Mass-Spectrometry (ICP-MS) was used to determine rare earth elements and 14 additional trace elements in glass shards, pyroxenes and feldspars in order to pin-point the onset of McMurdo Volcanic Group (MVG) activity in the stratigraphic column. Pumices in tephra layers of peralkaline phonolite composition in Unit 7.2 -between 108 and 114 mbsf - were also analysed for trace elements by ICP-MS. This tephra unit is not reworked and its isotopic age (21.44 ± 0.05 Ma) is the age of deposition. The height of the eruptive column responsible for the deposition of the tephra was probably less than 8 km; the source was local, probably within 30 km from the drill site. Phonolite of unit 7.2 of CRP-2/2A has no direct petrogenetic relation with the peralkaline trachyte in the tephra-enriched layer of CRP-1 at 116.55 mbsf. Volcanic clasts and sand grains (glass shards, aegirine-augite, anorthoclase) related to Cenozoic activity of MVG were observed only starting from Unit 9.8, where they are dated at 24.22 ± 0.06 Ma at c. 280 mbsf. In this unit the lowest- occurring basaltic glass shard is found at 297.54 mbsf. Sampled McMurdo volcanics are generally vesicular and vary in composition from alkali basalt to trachyte and peralkaline phonolite. By contrast, below 320 mbsf, aphyric or slightly-porphyritic volcanic clasts become more abundant but they are all non-vesiculated, pigeconite and ilmenite-bearing basalts and dolerite of tholeiitic affinity. These rocks are considered to be related to lava flows and associated intrusions of Jurassic age (Kirkpatrick basalts and Ferrar dolerite). As in CRP-1, McMurdo volcanics appear to derive from a variety of lithologics. Besides glaciers, a dominant role of wind transportation from exposed volcanic rocks may be inferred from the contemporary occurrence of glass shards of different compositions at depths above 297.54 mbsf. These data confirm that the onset of magmatic activity in southern Victoria Land is considerably delayed (by about 24 Ma) with respect to northern Victoria Land.

Geochemistry of basement clasts from sediment core CRP-3 in the ross Sea, Antarctica

Distribution patterns and petrographical and mineral chemistry data are described for the most representative basement lithologies occuring as clast in the c. 824 m thick Tertiary sedimentary sequence at the CRP-3 drillsite. These are granule to bolder grain size clasts of igneous and metamorphic rocks. Within the basement clast assemblage, granitoid pebbles are the predominant lithology. They consist of dominant grey biotic-bearing monzogranite, pink biotite-hornblende monzogranite, and biotite-bearing leucomomonzgranite. Minor lithologies include: actinolite-bearing leucotonalite, microgranite, biotite-hornblende quartz-monzonitic porphyr, and foliated biotic leucomonzogranite. Metamorphic clasts include rocks of both granitic and sedimentary derivation. They include mylonitic biotic orthogneiss, with or without garnet, muscovite-bearing quartzite, sillimanite-biotite paragneiss, biotite meta-sandstone, biotite-spotted schist, biotite-clacite-clinoamphibole meta-feldspathic arenite, biotite-calcite-clinozoisite meta-siltstone, biotite±clinoamphibole meta-marl, and graphite-bearing marble. As in previous CRP drillcores, the ubiquitous occurence of biotite±hornblende monzogranite pebbles is indicative of a local provenance, closely mirroring the dominance of these lithologies in the on-shore basement, where the Cambro-Ordovician Granite Harbour Intrusive Complex forms the most extensively exposed rock unit.

Composition of hydrothermal manganese oxide deposits from Galapagos mounds, DSDP Leg 70, Hole 509B

During DSDP Leg 70, a 1.60 m thick manganese oxide layer was sampled in hole 509B. This deposit is formed of alternating layers of hard plates of pure todorokite, about 2 mm thick, and of a more powdery material deeply impregnated with manganese oxide, about 3 mm thick. A SEM study of the plates and the associated powder shows that the powdery material is a transformation of a pre-existing sediment, while the plates are a direct precipitation from a hydrothermal solution. The uranium series disequilibrium method was used to determine the ages of the plates. They are found to be in good chronological sequence and in accordance with the sedimentation rate of the area (4.9 cm/10^3 years) which implies that they have been formed at the sediment-seawater interface during a pulsed injection of hydrothermal solution. The powder presents systematically an "older age" which is explained by a slowing down of the injection while the normal sediment settles; the older age is due to the 230Th excess of the sediment.

Radiochemistry at DSDP Leg 54 and 70 Holes

Use of the hydraulic piston corer during DSDP Leg 70 in the Galapagos mounds area allowed recovery of an undisturbed sedimentary sequence down to the basement. It thus became possible to establish the chronology of different events. Several holes on and off the mounds were studied, using uranium series disequilibrium methods of age determination and oxygen isotope stratigraphy. The following sequence was thereby established: 1) From 600,000 to 300,000 years ago there was normal pelagic sedimentation, with an injection of uranium-rich solution, probably of hydrothermal origin, between 400,000 and 300,000 years ago. 2) From 300,000 to 90,000 years ago, nontronitic clay formed, replacing a pre-existing sediment. 3) From 60,000 to 20,000 years ago, manganese oxide deposits formed, probably also replacing pre-existing sediments. 4) About 19,000 years ago there occurred a uranium injection from seawater, attributed to the end of the hydrothermal circulation. In some holes, especially Hole 424, Leg 54, younger manganese oxides have been found, indicating that some mounds may be presently active.