Testes de hipóteses em modelos de sobrevivência com Fração de cura

Survival models deals with the modeling of time to event data. However in some situations part of the population may be no longer subject to the event. Models that take this fact into account are called cure rate models. There are few studies about hypothesis tests in cure rate models. Recently a new test statistic, the gradient statistic, has been proposed. It shares the same asymptotic properties with the classic large sample tests, the likelihood ratio, score and Wald tests. Some simulation studies have been carried out to explore the behavior of the gradient statistic in fi nite samples and compare it with the classic statistics in diff erent models. The main objective of this work is to study and compare the performance of gradient test and likelihood ratio test in cure rate models. We first describe the models and present the main asymptotic properties of the tests. We perform a simulation study based on the promotion time model with Weibull distribution to assess the performance of the tests in finite samples. An application is presented to illustrate the studied concepts

Influência das cargas selecionadas na determinação da potência crítica determinada no ergômetro de braço em dois modelos lineares

O objetivo deste estudo foi verificar o efeito da seleção das cargas e do modelo utilizado para a determinação da PC no ergômetro de braço. Participaram do estudo oito voluntários do sexo masculino, que praticavam atividade física regularmente e eram aparentemente saudáveis. Os sujeitos realizaram quatro testes com cargas constantes mantidas até a exaustão voluntária no ergômetro de braço UBE 2462-Cybex. As cargas foram individualmente selecionadas para induzir a fadiga entre 1 e 15 minutos. Para cada sujeito, a determinação da PC foi realizada através de dois modelos lineares: potência-1/tempo e trabalho-tempo. em cada um dos modelos, foram utilizadas todas as potências (1), as três maiores (2) e as três menores (3). As PC encontradas no modelo potência-1/tempo e trabalho-tempo para a condição 3 (177,5 + 29,5; 173,9 + 33,3, respectivamente) foram significantemente menores do que as da condição 2 (190,5 + 23,2; 183,4 + 22,3, respectivamente), não existindo diferenças destas com as da condição 1 (184,2 + 25,4; 176,4 + 28,8, respectivamente). As PC determinadas no modelo potência-1/tempo para as condições 1 e 2 foram significantemente maiores do que as determinadas no modelo trabalho-tempo, não existindo diferenças para a condição 3. Pode-se concluir que as cargas selecionadas e o modelo utilizado interferem na determinação da PC encontrada no ergômetro de braço, podendo interferir no tempo de exaustão durante o exercício submáximo realizado em cargas relativas a este índice.

Germinação de Ternstroemia brasiliensis Cambess. (Pentaphylacaceae) de floresta de restinga

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Dependência térmica da germinação de sementes de Drymaria cordata (L.) Willd. ex Roem. & Schult. (Cariophyllaceae)

A temperatura representa um importante fator ambiental regulador da germinação de sementes. Procurou-se avaliar a resposta de sementes de D. cordata à temperatura, com base no modelo de graus-dia, testando-se assim a eficiência desse modelo em descrever o comportamento germinativo da semente em diferentes regimes térmicos. Testou-se também a resposta das sementes à luz, concluindo-se que a luz branca promove a germinação. As temperaturas mínima, ótima e máxima de germinação foram, respectivamente, 17,1, 26 e 33,4 ºC. Considerando-se que a velocidade de germinação de D. cordata variou com a temperatura numa relação aproximadamente linear, o modelo de graus-dia pode ser uma ferramenta válida para se estudar a dependência da temperatura da germinação dessas sementes. Uma possível aquisição de dormência durante a incubação isotérmica pode exigir a aplicação de outros modelos que descrevam melhor o comportamento germinativo de D. cordata em diferentes regimes térmicos.

Analysis of culling probability in dairy buffalo using survival models

In order to contribute to the genetic breeding programs of buffaloes, this study aimed to determine the influence of environmental effects on the stayability (ST) of dairy female Murrah buffalo in the herd. Data from 1016 buffaloes were used. ST was defined as the ability of the female to remain in the herd for 1, 2, 3, 4, 5 or 6 years after the first calving. Environmental effects were studied by survival analysis, adjusted to the fixed effects of farm, year and season of birth, class of first-lactation milk yield and age at first calving. The data were analyzed using the LIFEREG procedure of the SAS program that fits parametric models to failure time data (culling or ST = 0), and estimates parameters by maximum likelihood estimation. Breeding farm, year of birth and first-lactation milk yield significantly influenced (P < 0.0001) the ST to the specific ages (1 to 6 years after the first calving). Buffaloes that were older at first calving presented higher probabilities of being culled 1 year after the first calving, without any effect on culling at older ages. Buffaloes with a higher milk yield at first calving presented a lower culling probability and remained for a longer period of time in the herd. The effects of breeding farm, year of birth and first-lactation milk yield should be included in models used for the analysis of ST in buffaloes. Copyright © The Animal Consortium 2010.

Metodologia para análise da dependência térmica da germinação pelo modelo de grausdia

The effects of temperature on the rate of biological processes such as the germination are reported in several papers. The analysis of the thermal effect can be performed either from numerical indices or germination curves, which is usually presented as the accumulated percentage of germination versus time. Such curves can be fitted by empirical models and generally they offer a better description of the time-course of germination than single-value indices. On the other hand, in analyzing the germination curves, a question arises whether the model parameters have biological meaning. Thus, it is desirable that the model parameters both describe properly the germination curve and have biological meaning, which often does not occur. Considering the involvement of populations and percentages in germination assays, an analytical model has been widely used in the last two decades which is based on the concept of thermal time. This article discusses the conceptual basis and provides procedures for applying the thermal-time model in germination studies by using the probit regression method, both at infra and supra-optimal temperatures.

Sensoriamento remoto e geoestatística na caracterização espaço-temporal de plantas aquáticas

Pós-graduação em Ciências Cartográficas - FCT

Temperatura e osmocondicionamento na germinação de sementes de Urochloa brizantha (STAPF) Webster cv. Basilisk

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Descrição da resposta germinativa de cultivares de Phaseolus vulgaris L. (Fabaceae) à temperatura e ao potencial osmótico

Pós-graduação em Ciências Biológicas (Biologia Vegetal) - IBRC

Características biométricas das sementes e descrição da resposta germinativa pelo modelo do tempo térmico em diferentes populações de Peltophorum dubium (Spreng.) Taub

Pós-graduação em Ciências Biológicas (Biologia Vegetal) - IBRC

O tempo e a linguagem

Pós-graduação em Linguística e Língua Portuguesa - FCLAR

Integração entre um modelo de simulação hidrológica e Sistema de Informação Geográfica na delimitação de zonas tampão ripárias

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Estimação Bayesiana dos parâmetros da distribuição Exponencial Generalizada Bivariada

Pós-graduação em Matematica Aplicada e Computacional - FCT

Tecniche per il controllo dinamico del consumo di potenza per piattaforme system-on-chip

Providing support for multimedia applications on low-power mobile devices remains a significant research challenge. This is primarily due to two reasons: • Portable mobile devices have modest sizes and weights, and therefore inadequate resources, low CPU processing power, reduced display capabilities, limited memory and battery lifetimes as compared to desktop and laptop systems. • On the other hand, multimedia applications tend to have distinctive QoS and processing requirementswhichmake themextremely resource-demanding. This innate conflict introduces key research challenges in the design of multimedia applications and device-level power optimization. Energy efficiency in this kind of platforms can be achieved only via a synergistic hardware and software approach. In fact, while System-on-Chips are more and more programmable thus providing functional flexibility, hardwareonly power reduction techniques cannot maintain consumption under acceptable bounds. It is well understood both in research and industry that system configuration andmanagement cannot be controlled efficiently only relying on low-level firmware and hardware drivers. In fact, at this level there is lack of information about user application activity and consequently about the impact of power management decision on QoS. Even though operating system support and integration is a requirement for effective performance and energy management, more effective and QoSsensitive power management is possible if power awareness and hardware configuration control strategies are tightly integratedwith domain-specificmiddleware services. The main objective of this PhD research has been the exploration and the integration of amiddleware-centric energymanagement with applications and operating-system. We choose to focus on the CPU-memory and the video subsystems, since they are the most power-hungry components of an embedded system. A second main objective has been the definition and implementation of software facilities (like toolkits, API, and run-time engines) in order to improve programmability and performance efficiency of such platforms. Enhancing energy efficiency and programmability ofmodernMulti-Processor System-on-Chips (MPSoCs) Consumer applications are characterized by tight time-to-market constraints and extreme cost sensitivity. The software that runs on modern embedded systems must be high performance, real time, and even more important low power. Although much progress has been made on these problems, much remains to be done. Multi-processor System-on-Chip (MPSoC) are increasingly popular platforms for high performance embedded applications. This leads to interesting challenges in software development since efficient software development is a major issue for MPSoc designers. An important step in deploying applications on multiprocessors is to allocate and schedule concurrent tasks to the processing and communication resources of the platform. The problem of allocating and scheduling precedenceconstrained tasks on processors in a distributed real-time system is NP-hard. There is a clear need for deployment technology that addresses thesemulti processing issues. This problem can be tackled by means of specific middleware which takes care of allocating and scheduling tasks on the different processing elements and which tries also to optimize the power consumption of the entire multiprocessor platform. This dissertation is an attempt to develop insight into efficient, flexible and optimalmethods for allocating and scheduling concurrent applications tomultiprocessor architectures. It is a well-known problem in literature: this kind of optimization problems are very complex even in much simplified variants, therefore most authors propose simplified models and heuristic approaches to solve it in reasonable time. Model simplification is often achieved by abstracting away platform implementation ”details”. As a result, optimization problems become more tractable, even reaching polynomial time complexity. Unfortunately, this approach creates an abstraction gap between the optimization model and the real HW-SW platform. The main issue with heuristic or, more in general, with incomplete search is that they introduce an optimality gap of unknown size. They provide very limited or no information on the distance between the best computed solution and the optimal one. The goal of this work is to address both abstraction and optimality gaps, formulating accurate models which accounts for a number of ”non-idealities” in real-life hardware platforms, developing novel mapping algorithms that deterministically find optimal solutions, and implementing software infrastructures required by developers to deploy applications for the targetMPSoC platforms. Energy Efficient LCDBacklightAutoregulation on Real-LifeMultimediaAp- plication Processor Despite the ever increasing advances in Liquid Crystal Display’s (LCD) technology, their power consumption is still one of the major limitations to the battery life of mobile appliances such as smart phones, portable media players, gaming and navigation devices. There is a clear trend towards the increase of LCD size to exploit the multimedia capabilities of portable devices that can receive and render high definition video and pictures. Multimedia applications running on these devices require LCD screen sizes of 2.2 to 3.5 inches andmore to display video sequences and pictures with the required quality. LCD power consumption is dependent on the backlight and pixel matrix driving circuits and is typically proportional to the panel area. As a result, the contribution is also likely to be considerable in future mobile appliances. To address this issue, companies are proposing low power technologies suitable for mobile applications supporting low power states and image control techniques. On the research side, several power saving schemes and algorithms can be found in literature. Some of them exploit software-only techniques to change the image content to reduce the power associated with the crystal polarization, some others are aimed at decreasing the backlight level while compensating the luminance reduction by compensating the user perceived quality degradation using pixel-by-pixel image processing algorithms. The major limitation of these techniques is that they rely on the CPU to perform pixel-based manipulations and their impact on CPU utilization and power consumption has not been assessed. This PhDdissertation shows an alternative approach that exploits in a smart and efficient way the hardware image processing unit almost integrated in every current multimedia application processors to implement a hardware assisted image compensation that allows dynamic scaling of the backlight with a negligible impact on QoS. The proposed approach overcomes CPU-intensive techniques by saving system power without requiring either a dedicated display technology or hardware modification. Thesis Overview The remainder of the thesis is organized as follows. The first part is focused on enhancing energy efficiency and programmability of modern Multi-Processor System-on-Chips (MPSoCs). Chapter 2 gives an overview about architectural trends in embedded systems, illustrating the principal features of new technologies and the key challenges still open. Chapter 3 presents a QoS-driven methodology for optimal allocation and frequency selection for MPSoCs. The methodology is based on functional simulation and full system power estimation. Chapter 4 targets allocation and scheduling of pipelined stream-oriented applications on top of distributed memory architectures with messaging support. We tackled the complexity of the problem by means of decomposition and no-good generation, and prove the increased computational efficiency of this approach with respect to traditional ones. Chapter 5 presents a cooperative framework to solve the allocation, scheduling and voltage/frequency selection problem to optimality for energyefficient MPSoCs, while in Chapter 6 applications with conditional task graph are taken into account. Finally Chapter 7 proposes a complete framework, called Cellflow, to help programmers in efficient software implementation on a real architecture, the Cell Broadband Engine processor. The second part is focused on energy efficient software techniques for LCD displays. Chapter 8 gives an overview about portable device display technologies, illustrating the principal features of LCD video systems and the key challenges still open. Chapter 9 shows several energy efficient software techniques present in literature, while Chapter 10 illustrates in details our method for saving significant power in an LCD panel. Finally, conclusions are drawn, reporting the main research contributions that have been discussed throughout this dissertation.

Hybrid Methods for Resource Allocation and Scheduling Problems in Deterministic and Stochastic Environments

This work presents exact, hybrid algorithms for mixed resource Allocation and Scheduling problems; in general terms, those consist into assigning over time finite capacity resources to a set of precedence connected activities. The proposed methods have broad applicability, but are mainly motivated by applications in the field of Embedded System Design. In particular, high-performance embedded computing recently witnessed the shift from single CPU platforms with application-specific accelerators to programmable Multi Processor Systems-on-Chip (MPSoCs). Those allow higher flexibility, real time performance and low energy consumption, but the programmer must be able to effectively exploit the platform parallelism. This raises interest in the development of algorithmic techniques to be embedded in CAD tools; in particular, given a specific application and platform, the objective if to perform optimal allocation of hardware resources and to compute an execution schedule. On this regard, since embedded systems tend to run the same set of applications for their entire lifetime, off-line, exact optimization approaches are particularly appealing. Quite surprisingly, the use of exact algorithms has not been well investigated so far; this is in part motivated by the complexity of integrated allocation and scheduling, setting tough challenges for ``pure'' combinatorial methods. The use of hybrid CP/OR approaches presents the opportunity to exploit mutual advantages of different methods, while compensating for their weaknesses. In this work, we consider in first instance an Allocation and Scheduling problem over the Cell BE processor by Sony, IBM and Toshiba; we propose three different solution methods, leveraging decomposition, cut generation and heuristic guided search. Next, we face Allocation and Scheduling of so-called Conditional Task Graphs, explicitly accounting for branches with outcome not known at design time; we extend the CP scheduling framework to effectively deal with the introduced stochastic elements. Finally, we address Allocation and Scheduling with uncertain, bounded execution times, via conflict based tree search; we introduce a simple and flexible time model to take into account duration variability and provide an efficient conflict detection method. The proposed approaches achieve good results on practical size problem, thus demonstrating the use of exact approaches for system design is feasible. Furthermore, the developed techniques bring significant contributions to combinatorial optimization methods.