Analysis of floristic composition and structure as an aid to monitoring protected areas of dense rain forest in southeastern Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

New record of Rhagomys rufescens (Thomas 1886) (Rodentia : Muridae : Sigmodontinae) in the Atlantic forest of southeastern Brazil

Rhagomys rufescens is a threatened Sigmodontinae rodent from the Atlantic forest of southeastern Brazil, known by a few specimens deposited in scientific collections. This work presents a new record of this species, collected in Parque Estadual da Serra do Mar-Nucleo Picinguaba (Ubatuba, SP) in April 2002, and some biological data. This finding reinforces the urgency of improving collecting efforts in Atlantic forest, in order to know and preserve its biodiversity.

Zootherapy goes to town: the use of animal-based remedies in urban areas of NE and N Brazil

This paper examines the therapeutic possibilities offered by animal-based remedies in five Brazilian cities. Information was obtained through semi-structured questionnaires applied to 79 traders of medicinal animals at Sao Luis, Teresina, Joao Pessoa and Campina Grande (Northeastern) and Belem (Northern) Brazil. We recorded the use of 97 animal species as medicines, whose products were recommended for the treatment of 82 illnesses. The most frequently quoted treatments concerned the respiratory system (58 species; 407 use-citations), the osteomuscular system and conjunctive tissue (46 species; 384 use-citations), and the circulatory system (34 species; 124 use-citations). Mammals (27 species), followed by reptiles (24) and fishes (16) represented the bulk of medicinal species. In relation to users, 53% of the interviewees informed that zootherapeuticals resources were sought after by people from all social classes, while 47% stated that low income people were the main buyers. The notable use and commercialization of medicinal animals to alleviate and cure health problems and ailments in cities highlights the resilience of that resource in the folk medicine. Most remedies quoted by interviewees depend on wild-caught animals, including some species under official protection. Among other aspects, the harvesting of threatened species confers zootherapy a role in the discussions about biodiversity conservation in Brazil. (C) 2007 Elsevier B.V.. All rights reserved.

Bird diversity and abundance in forest fragments and Eucalyptus plantations around an Atlantic forest reserve, Brazil

Little of Brazil's remaining Atlantic forest is protected, so it is important to assess how well the region's wildlife can persist in areas/habitats outside reserves. We studied bird diversity and abundance during 546 point counts in the Sooretama/Linhares reserve, 200 point counts in 31 forest fragments (10-150 h), and 50 point counts in < 30-year-old Eucalyptus plantations, within 7 km of the reserve. Only eight bird species were recorded in Eucalyptus, and this impoverishment, as compared to some Eucalyptus plantations elsewhere in Brazil may be a result of intensive clearance of understory vegetation. Species diversity in forest fragments was significantly lower than in the reserve. Twelve, mostly non-forest or edge species, were significantly commoner in the fragments, but nineteen species were frequent in the reserve but rare or absent in forest fragments. These included two Pyrrhura parakeets, a Brotogeris parakeet, a trogon Trogon, a jacamar Galbula, woodpeckers Piculus and Campephilus, Myrmotherula antwrens, and Hemithraupus and Tachyphonus tanagers. Bird species richness at points in forest fragments did not decline with fragment size, distance from the reserve, or forest quality. However, forest in fragments was more heavily degraded than forest within the reserve and poor forest quality may be the cause of declines in some species. Whilst protection of forest within reserves is a priority, management of forest fragments may aid conservation of some threatened species.

Genetic conservation of Brazilian fishes - Present state and perspectives

Natural environments have been worldwide affected by the growing impact of anthropogenic actions that promote the reduction or the extinction of several vertebrate species. Aquatic ecosystems represent one of the most affected environments and many fish species and/or populations have been increasingly fragmented distributed due to habitat degradation, predatory fishing, introduction of exotic species, river sedimentation, deforestation, pollution, reduction of food resource, and construction of hydroelectric dams. Actually, more than 150 Brazilian fish species, including freshwater, estuary and coastal species, can be considered threatened. Information on the diversity, conservation biology and population analysis on threatened species or populations, with several DNA markers, can be extremely useful for the success of fish species-recovery and maintenance programs. Although DNA analysis in Neotropical fish species are just beginning, they tend to increase with the widespread attention to the use of molecular approaches to minimize problems related to the risk of extinction. The accumulation of information on biology and pattern of genetic variation of fish species, associated with ecological and demographic data, and also education and respect to the nature, constitutes a crucial task to develop efficient conservation strategies in order to preserve the genetic diversity in aquatic environments.

Identification of sperm head subpopulations with defined pleiomorphic characteristics in ejaculates of captive Goeldi's monkeys (Callimico goeldii)

The aim of this study was to evaluate the incidence of pleiomorphisms and its influence on the distribution of sperm morphometric subpopulations in ejaculates from the vulnerable Goeldi's monkey (Callimico goeldii) by using a combination of computerized analysis system and Principal Component Analysis (PCA) methods Each sperm head was measured for four primary spermatozoal head dimensional parameters (area [A (μm2)], perimeter [P (μm)], length [L (μm)] and width [W (μm)]) and three head shape derived parameters (ellipticity [(L/W)], elongation [(L-W)/(L+W)] and rugosity [(4πA/P2)]) Six separate subpopulations (SPs) were identified: SP1, constituted by very large, narrow and very elliptical spermatozoa (A=16.85±1.56μm2, W=2.75±0.42μm and ellipticity=2.16±0.24); SP2, characterized by average sized, short, wide and round spermatozoa (A=15.00±1.92μm2, L=5.06±0.49μm, W=3.51±0.31μm and ellipticity=1.44±0.15); SP3, represented by small, wide and slightly round spermatozoa (A=14.95±1.75μm2, W=3.47±0.29μm and ellipticity=1.48±0.14); SP4 included very small, short and very round spermatozoa (A=14.15±2.38μm2, L=4.90±0.57μm and elongation=0.18±0.05); SP5 consisted of average sized and slightly elliptical spermatozoa (A=15.14±1.72μm2 and ellipticity=1.49±0.14); and SP6 included large and round spermatozoa (A=16.30±1.62μm2 and elongation=0.19±0.04) There were differences in the sperm subpopulation distribution (P<0.001) among the five donors analyzed In conclusion, the results of the current study confirmed that the use of computer sperm analysis methods combined with PCA cluster analyses are useful methods to identify, classify, and characterize different sperm head morphometric subpopulations in neotropical primates Broadening our knowledge of C goeldii sperm morphometric abnormalities as well as developing reliable techniques for sperm evaluation may be essential for ex situ conservation of this threatened species © 2012 Elsevier B.V.

From widespread to microendemic: Molecular and acoustic analyses show that Ischnocnema guentheri (Amphibia: Brachycephalidae) is endemic to Rio de Janeiro, Brazil

Many species of tropical amphibians are restricted to very small ranges, and this microendemism coupled with ongoing habitat loss and susceptibility to emerging pathogens imperils the long-term persistence of these species. Incomplete taxonomic and distributional knowledge may obscure conservation assessment, particularly in putatively widespread species that are typically considered to be of Least Concern in Red List assessments, but that in fact may constitute complexes of partly microendemic species. Such is the case in the Steindachner's Robber Frog, Ischnocnema guentheri which, together with the recently recognized Ischnocnema henselii, is thought to occupy most of the Brazilian Atlantic Forest. To test whether these taxa may constitute a species complex of range-restricted and thus potentially threatened species, we analyzed 160 samples of I. guentheri and/or I. henselii for two molecular markers, 16S rRNA (16S) and recombination activation gene 1 (RAG1). To verify the monophyly of the complex, closely related species were also included in the 16S analysis. Congruent evidence from the molecular data and from analyses of advertisement calls support the existence of six distinct species within the complex: I. guentheri and I. henselii as well as four candidate new species. The lineages are distributed as a mosaic in the Atlantic Forest and are sympatric at some localities without indication of admixture. Their phylogeographical pattern partially agrees with paleo-models for the Atlantic Forest, but also suggests the existence of micro-refugia in less stable areas. I. guentheri, previously considered to be widespread, was found only in its type locality, a reserve within the urban area of Rio de Janeiro city. Although none of the species studied appears highly threatened with extinction, we recommend their IUCN threat status to be re-evaluated carefully for the next comprehensive update of the Red List of Brazil's amphibians. © 2013 Springer Science+Business Media Dordrecht.

Dados ecológicos da herpetofauna do Parque Estadual da Ilha Anchieta, Ubatuba, São Paulo, Brasil

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Novas informações sobre a história natural da maria-da-restinga (Phylloscartes kronei) (Aves, Tyrannidae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Revisão taxonômica de Sabiaceae Blume para o neotrópico

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Diversidade da quiropterofauna (Mammalia) no Parque Ecológico de Gunma, Santa Bárbara do Pará

O implemento de Unidades de Conservação constitui um dos meios para se evitar a perda de biodiversidade nas regiões de influência das grandes metrópoles, e o monitoramento de certos grupos zoológicos nessas unidades pode contribuir ao êxito de programas conservacionistas locais. O Parque Ecológico de Gunma (PEG), com área de 540 hectares administrada pela Associação Gunma Kenjin-Kai do Norte do Brasil, protege um remanescente florestal no município de Santa Bárbara do Pará, região da Grande Belém, Estado do Pará, constituído principalmente por fitofisionomias de Terra Firme e Igapó. Este trabalho tem por objetivo oferecer um perfil taxonômico e ecológico da quiropterofauna (Mammalia) nos limites do Parque e seu entorno. A análise quantitativa incluiu medidas de esforço de captura, riqueza e diversidade, assim como uma avaliação da estrutura de comunidades por Escalonamento Multidimensional (MDS) considerando-se as fisionomias vegetais principais e duas áreas selecionadas de Terra Firme. Num conjunto de seis campanhas, de julho a dezembro de 2005, identificaram-se 37 espécies de morcegos, distribuídas em cinco famílias. Contudo, em nenhum ambiente as curvas de rarefação atingiram a assíntota. Os índices de diversidade de Shannon-Wiener (H’) e Simpson (D) foram de 1,86 e 0,69, respectivamente. Carollia perspicillata exibiu a mais alta abundância relativa, abrangendo 50% das capturas, mas de modo distinto entre fisionomias com aproximadamente 59% em Terra Firme e 32% em Igapó. O achado de Neonycteris pusilla representa a segunda ocorrência do táxon para o Estado do Pará. As estimativas de diversidade foram mais elevadas no Igapó (H’ = 1,91; [1-D] = 0,80) do que na Terra Firme (H’ = 1,71; [1-D] = 0,63), apesar da pequena área do primeiro (3,3% da extensão do PEG) e da maior riqueza de espécies da segunda. Isto pode refletir o fato de que a quase totalidade das capturas se deu nos meses mais secos do ano na região, quando em tese haveria tropismo das espécies por espaços de maior oferta hídrica. Assim, parece imperativo complementar o levantamento com amostragens na estação chuvosa para uma descrição fidedigna da quiropterofauna do PEG. Confirmando-se o previsto, a comparação de duas áreas de Terra Firme com distintos graus de alteração apontou maior diversidade de quirópteros na área mais conservada. A importância do PEG como Unidade de Conservação pode ser atestada pela presença de espécies sob risco (vulneráveis ou quase ameaçadas), p.ex. N. pusilla e Tonatia carrikeri. Verificou-se a ameaça de interferências antrópicas sobre os seus ecossistemas devido principalmente à proximidade com áreas rurais e urbanas. O monitoramento da riqueza e dinâmica ecológica dos morcegos no Parque Ecológico de Gunma pode evitar a extinção local de táxons raros, assim como a proliferação de outros, que em situações especiais se tornam ameaçadores à saúde humana, caso do hematófago Desmodus rotundus, potencial hospedeiro e transmissor do vírus rábico.

Herpetofauna of Paranapiacaba: expanding our knowledge on a historical region in the Atlantic forest of southeastern Brazil

The largest area of preserved Atlantic forest is located in the southern portion of Brazil. The region of Paranapiacaba is depicted in Brazilian zoological studies as one of the first and most intensely sampled areas of the state of São Paulo.We provide a concise list of reptiles and amphibians from the Paranapiacaba Municipal Park. It represents the first comprehensive survey of the group in the area. We recorded 136 species of reptiles and amphibians from field surveys, museum collections and the literature. The anuran diversity of Paranapiacaba is greater than that of Estação Ecológica de Boracéia, which has been considered the most distinctive areas in São Paulo in terms of amphibian diversity. The rich history of herpetological research in the region, including the occurrence of the two most threatened species in Brazil, converts the area to an important conservation landmark for the Brazilian herpetofauna.

Evaluation of sperm quality in successive regular collections from captive black-and-gold howler monkeys (Alouatta caraya)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Differential distribution of sperm subpopulations and incidence of pleiomorphisms in ejaculates of captive howling monkeys (Alouatta caraya)

The aim of this study was to develop an objective method to determine the incidence of pleiomorphisms and its influence on the distribution of sperm morphometric subpopulations in ejaculates of howling monkeys (Alouatta caraya) by using a combination of computerized analysis system (ASMA) and principal component analysis (PCA) methods. Ejaculates were collected by electroejaculation methods on a regular basis from five individuals maintained under identical captive environmental, nutritional, and management conditions. Each sperm head was measured for dimensional parameters (Area [A, (square micrometers)], Perimeter [P, (micrometers)], Length [L, (micrometers)], and Width [W, (micrometers)]) and shape-derived parameters (Ellipticity [(L/W)], Elongation [(L - W)/(L + W)], and Rugosity [(4 pi A/P-2)]). PCA revealed two principal components explaining more than the 96 % of the variance. Clustering methods and discriminant analyzes were performed and seven separate subpopulations were identified. There were differences (P < 0.001) in the distribution of the seven subpopulations as well as in the incidence of abnormal pleiomorphisms (58.6 %, 49.8 %, 35.1 %, 66.4 %, and 55.1 %, P < 0.05) among the five donors tested. Our results indicated that differences among individuals related to the incidence of pleiomorphisms, and sperm subpopulational structure was not related to the captivity conditions or the sperm collection method, since all individuals were studied under identical conditions. In conclusion, the combination of ASMA and PCA is a useful clinical diagnostic resource for detecting deficiencies in sperm morphology and sperm subpopulations in A. caraya ejaculates that could be used in ex situ conservation programs of threatened species in Alouatta genus or even other endangered neotropical primate species.

Variabilidade genética e estruturação populacional do Bicudinho-do-brejo-paulista, Formicivora paludicola (aves: Thamnophilidae): uma espécie criticamente ameaçada do estado de São Paulo

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)